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The map label for this gene is ydfK [H]

Identifier: 55980846

GI number: 55980846

Start: 835429

End: 836172

Strand: Reverse

Name: ydfK [H]

Synonym: TTHA0877

Alternate gene names: 55980846

Gene position: 836172-835429 (Counterclockwise)

Preceding gene: 55980848

Following gene: 55980845

Centisome position: 45.2

GC content: 69.76

Gene sequence:

>744_bases
ATGGAGCTCACCCTTCTGGACAAGCTTTCGGGAACCCTGGCGAACGCCGCCACCGTGGCCCTAGGCACGGGGCTCGGCCT
CGTCCTAAGGGGAAGGCTTCCCGAGCGGATGGCCCGGATCATGGTGCAAGGGGTGGGGCTCACCACCCTCTTCATCGGCC
TCTCCATGGCCCAGGCCCTGGGGAAGGCGAAGGGCGGGGCGGTGGACGGGGTGGTCCTGGGGCTTGTCGCCCTGGTCCTG
GGGGGGCTTCTCGGGGAGTGGGCTAGGCTGGAGGAGGGCCTCGAGGGCCTCGGGGAGAGGATCAAGCGGGCGGTGCGGGG
CGGGGGAAGCTTCACCGAGGGCTTCGTGGCGGCAAGCCTCCTCTTCTGCGTGGGGCCCATGACCCTCCTCGGGGCCATCC
AAAACGGCCTCACGGGAGACGCGAGCCTCCTCTTCCTCAAGGCCACCCTGGACGGCCTCTCCGCCATCGCCCTCACCAGC
TCCTTCGGCGTAGGGGTGGGCTTCAGCGTTTTGGTCATCCTCCTCTACCAGGGGGGCGTGGCCCTCCTGGCAGGCACCTT
GAGCCAAGCCCTCCCCGACCCCGCGCAAGACCCCAGGGTCCTCCTCGTGACCGGGGTGGGTGGGCTCATGATCCTGGGCA
TCGGCATCAACCTCTTAGGGCTCACCCGGGTGCGGGTGGCCTCCTTCCTCCCCGCCCTGCTCCTCGCCCCCTTGGTCTGG
GCCCTCGCGGACCGCCTCGGCTAA

Upstream 100 bases:

>100_bases
CCTGCCTCGGGTGGTAGGCCTCCCCGTACCCCGGGTGGAAGAGGGTGGGGGTGCCGTCTTGGGTGAGGCGAAGCTCCATC
TTTTGGCTAGAATAGCCGCC

Downstream 100 bases:

>100_bases
AATGCCCGGTATGGAGCTGTCTCCTGAGCTTCTCCGCAAGCTGGAAACCCTGGCCAAAATCCGCCTATCCCCCGAGGAAG
AGGCCCTGCTTTTGCAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MELTLLDKLSGTLANAATVALGTGLGLVLRGRLPERMARIMVQGVGLTTLFIGLSMAQALGKAKGGAVDGVVLGLVALVL
GGLLGEWARLEEGLEGLGERIKRAVRGGGSFTEGFVAASLLFCVGPMTLLGAIQNGLTGDASLLFLKATLDGLSAIALTS
SFGVGVGFSVLVILLYQGGVALLAGTLSQALPDPAQDPRVLLVTGVGGLMILGIGINLLGLTRVRVASFLPALLLAPLVW
ALADRLG

Sequences:

>Translated_247_residues
MELTLLDKLSGTLANAATVALGTGLGLVLRGRLPERMARIMVQGVGLTTLFIGLSMAQALGKAKGGAVDGVVLGLVALVL
GGLLGEWARLEEGLEGLGERIKRAVRGGGSFTEGFVAASLLFCVGPMTLLGAIQNGLTGDASLLFLKATLDGLSAIALTS
SFGVGVGFSVLVILLYQGGVALLAGTLSQALPDPAQDPRVLLVTGVGGLMILGIGINLLGLTRVRVASFLPALLLAPLVW
ALADRLG
>Mature_247_residues
MELTLLDKLSGTLANAATVALGTGLGLVLRGRLPERMARIMVQGVGLTTLFIGLSMAQALGKAKGGAVDGVVLGLVALVL
GGLLGEWARLEEGLEGLGERIKRAVRGGGSFTEGFVAASLLFCVGPMTLLGAIQNGLTGDASLLFLKATLDGLSAIALTS
SFGVGVGFSVLVILLYQGGVALLAGTLSQALPDPAQDPRVLLVTGVGGLMILGIGINLLGLTRVRVASFLPALLLAPLVW
ALADRLG

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=173, Percent_Identity=34.1040462427746, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 24991; Mature: 24991

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTLLDKLSGTLANAATVALGTGLGLVLRGRLPERMARIMVQGVGLTTLFIGLSMAQAL
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
GKAKGGAVDGVVLGLVALVLGGLLGEWARLEEGLEGLGERIKRAVRGGGSFTEGFVAASL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LFCVGPMTLLGAIQNGLTGDASLLFLKATLDGLSAIALTSSFGVGVGFSVLVILLYQGGV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCH
ALLAGTLSQALPDPAQDPRVLLVTGVGGLMILGIGINLLGLTRVRVASFLPALLLAPLVW
HHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALADRLG
HHHHHCC
>Mature Secondary Structure
MELTLLDKLSGTLANAATVALGTGLGLVLRGRLPERMARIMVQGVGLTTLFIGLSMAQAL
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
GKAKGGAVDGVVLGLVALVLGGLLGEWARLEEGLEGLGERIKRAVRGGGSFTEGFVAASL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LFCVGPMTLLGAIQNGLTGDASLLFLKATLDGLSAIALTSSFGVGVGFSVLVILLYQGGV
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCH
ALLAGTLSQALPDPAQDPRVLLVTGVGGLMILGIGINLLGLTRVRVASFLPALLLAPLVW
HHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALADRLG
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]