Definition | Thermus thermophilus HB8 chromosome, complete genome. |
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Accession | NC_006461 |
Length | 1,849,742 |
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The map label for this gene is 55980842
Identifier: 55980842
GI number: 55980842
Start: 832026
End: 832808
Strand: Reverse
Name: 55980842
Synonym: TTHA0873
Alternate gene names: NA
Gene position: 832808-832026 (Counterclockwise)
Preceding gene: 55980843
Following gene: 55980841
Centisome position: 45.02
GC content: 70.63
Gene sequence:
>783_bases ATGGCAGAGGTACATGTCCGCGAGCTAAAGGGCTGGGAGGAGATGGAGGAGGTGGTGGCCCTCCAGCGGGAGGTCTGGGG GCGCGCGGAAAGCGACCTGGTGCCGCGGGGCCTCCTCGTGGCCGTCCAGGACGAGGGGGGGCTCGTGGCCGGGGCCTTCG CCGAGGGGAGGATGGTGGGCTTCGTCTTCGGCTTCCCCACGAAGGACCCCGCCCTCCACCACTCCCACATGCTGGGCGTC CTGGAGGCCTACAGGGGCACGGGGGCGGCCCTCCTCCTCAAGCGCTTCCAAAGGGACTGGTGCCTGGCCCGCGGGGTGCG CAGGGTGGTCTGGACCTTTGACCCCATGCGGGGGGTAAACGCCAACTTCAACCTGCGGAAGCTCGGGGCCACGGCCAAAA CCTACCTCCCCGACCACTACGGCCCCATGTCGGGCATCAACGCCGGGGCTCCCTCGGACCGGCTCCTCGCCGAGTGGGAC CTCCTCTCGGAAAGGGTCTACGCCCGGCTCTACGCCCCCCCGCCCGAGCCCGAGGTGGCGGGCCTCCCCCAGGCGAACCG GGTGGAGGGGGAGGTGCCCCTCGAGGCGAGGCTGGACCTCGAGGCCGAGAGGCTCCTCTTCCAGATCCCCGAGGACTGGG GGAGGATCCTCCGGGAAGACCCCGCCCTCGCCCTAAAGTGGCGGGAGCACAGCCGCCTGGTCCTCCCCCACTACTTCGCC CGGGGCTACCGCCTGGTGGACCTCGTCCGCCACCCCAACCGGTATGTCCTGGCTAAGGACTGA
Upstream 100 bases:
>100_bases TGGAGGAGGCCCTCGAGGCCAAGGACGGCCTCATGCCCGTGCCGGAAGGCGTGGGCATCGGGGTCCACCTGAAGCTTCCC TTCGTGGAGCGGGTCACGCT
Downstream 100 bases:
>100_bases GCTCTGGACCGCCGAGGTGGTCTACACCGGCTTCGGCACCCCCATGCTCCGGGGGGCCTTGGCGGTGCAGGGCGGGTTCG TGGTGGGCCAGGGGAGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Chorismate Synthase; GNAT Family Acetyltransferase; Acetyltransferase; NH2-Acetyltransferase; Gcn5-Related N-Acetyltransferase
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MAEVHVRELKGWEEMEEVVALQREVWGRAESDLVPRGLLVAVQDEGGLVAGAFAEGRMVGFVFGFPTKDPALHHSHMLGV LEAYRGTGAALLLKRFQRDWCLARGVRRVVWTFDPMRGVNANFNLRKLGATAKTYLPDHYGPMSGINAGAPSDRLLAEWD LLSERVYARLYAPPPEPEVAGLPQANRVEGEVPLEARLDLEAERLLFQIPEDWGRILREDPALALKWREHSRLVLPHYFA RGYRLVDLVRHPNRYVLAKD
Sequences:
>Translated_260_residues MAEVHVRELKGWEEMEEVVALQREVWGRAESDLVPRGLLVAVQDEGGLVAGAFAEGRMVGFVFGFPTKDPALHHSHMLGV LEAYRGTGAALLLKRFQRDWCLARGVRRVVWTFDPMRGVNANFNLRKLGATAKTYLPDHYGPMSGINAGAPSDRLLAEWD LLSERVYARLYAPPPEPEVAGLPQANRVEGEVPLEARLDLEAERLLFQIPEDWGRILREDPALALKWREHSRLVLPHYFA RGYRLVDLVRHPNRYVLAKD >Mature_259_residues AEVHVRELKGWEEMEEVVALQREVWGRAESDLVPRGLLVAVQDEGGLVAGAFAEGRMVGFVFGFPTKDPALHHSHMLGVL EAYRGTGAALLLKRFQRDWCLARGVRRVVWTFDPMRGVNANFNLRKLGATAKTYLPDHYGPMSGINAGAPSDRLLAEWDL LSERVYARLYAPPPEPEVAGLPQANRVEGEVPLEARLDLEAERLLFQIPEDWGRILREDPALALKWREHSRLVLPHYFAR GYRLVDLVRHPNRYVLAKD
Specific function: Unknown
COG id: COG3375
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29448; Mature: 29317
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVHVRELKGWEEMEEVVALQREVWGRAESDLVPRGLLVAVQDEGGLVAGAFAEGRMVG CCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEE FVFGFPTKDPALHHSHMLGVLEAYRGTGAALLLKRFQRDWCLARGVRRVVWTFDPMRGVN EEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC ANFNLRKLGATAKTYLPDHYGPMSGINAGAPSDRLLAEWDLLSERVYARLYAPPPEPEVA CCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCC GLPQANRVEGEVPLEARLDLEAERLLFQIPEDWGRILREDPALALKWREHSRLVLPHYFA CCCCCCCCCCCCCCCEECCCHHHHHHEECCHHHHHHHHCCCCEEEEECCCCCEECHHHHH RGYRLVDLVRHPNRYVLAKD CCHHHHHHHHCCCEEEEECC >Mature Secondary Structure AEVHVRELKGWEEMEEVVALQREVWGRAESDLVPRGLLVAVQDEGGLVAGAFAEGRMVG CCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEEEECCCCEEE FVFGFPTKDPALHHSHMLGVLEAYRGTGAALLLKRFQRDWCLARGVRRVVWTFDPMRGVN EEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC ANFNLRKLGATAKTYLPDHYGPMSGINAGAPSDRLLAEWDLLSERVYARLYAPPPEPEVA CCCCCHHHCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCC GLPQANRVEGEVPLEARLDLEAERLLFQIPEDWGRILREDPALALKWREHSRLVLPHYFA CCCCCCCCCCCCCCCEECCCHHHHHHEECCHHHHHHHHCCCCEEEEECCCCCEECHHHHH RGYRLVDLVRHPNRYVLAKD CCHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA