| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
Click here to switch to the map view.
The map label for this gene is 55980815
Identifier: 55980815
GI number: 55980815
Start: 811047
End: 811793
Strand: Reverse
Name: 55980815
Synonym: TTHA0846
Alternate gene names: NA
Gene position: 811793-811047 (Counterclockwise)
Preceding gene: 55980816
Following gene: 55980814
Centisome position: 43.89
GC content: 74.56
Gene sequence:
>747_bases ATGCCTTGGCGGCCCGTGGGGCACGGGGTGGAGGCCCTCTACCTGGCCACGCCCCTGGGACGGCGGGTGGGGTACGGGGT CTACGTGTACCGCTACCGGGGGCTCCTGGTGGACACGGGCCCCCCTAAGGCCCGCCCCTTCGCCCCCGAGGCCGCCCTCC TCACCCACGCCCACGAGGACCACGCCGGGGGGGCCTCCCGGCTCGGCCTCCCCGTCTACGGAAGCGCCCTGACGGCCGCC CTGGTCGCCGCCCCCAAGCCCCTCCGCCTCTACCGCCGCCTGGTCTGGGGAAGCCCCCGCCCCGCACAGGTGGAGGCGGC CGAGCGGGTGGGCCCCCTCCACCTCCTCCCCACCCCGGGCCACGCCCCCGACCACGTGGCCCTCTACGACCCCGAGGCCG GTCTTTTCTTCGGGGGGGACCTCTTCCTGGGGGTGCGGGCGAGCCTCGCCACCCCGGGGTTTGACCTCCAGGCCCTCCTC CAAAGCCTCCGGAGGGCCCTCGCCCTAAAGCCCCGCGCCTTCTACTGCGCCCACGCGGGGCCCCTCCAAGCCCCCCTGGA GGCCCTTCAGGCCAAGCTGGACTTCCTGGAGGGGAAGCGGGAGGAGGCCCTCCGCCTCAAGGCCCGAGGCCTCACCCCCA AAGAGGCCCTCCGGCGCCTCTTCGGGGGGGAAAGCCCCTTGGCCCTCCTCTCCGGCGGGGAGATGAGCCGCCTCGCCTTC GTGGAGGCCCTTATGATGGAGCCATGA
Upstream 100 bases:
>100_bases GCAAAGCTACCGGGGCATCCCCCTCCACCTGGTGGCGGCGGACGCCCTCCGCTTCCGGCCCAAGCTGGTTCTGGAAGCGG ACTGAGGTTATACTCAGTAC
Downstream 100 bases:
>100_bases TCACCGCCTTCGTCCTCATCCGGCCCCGGGGGAACCGCGTCCAGGCCCTGGGGGAGGCCATCGCCGAGCTGCCCCAGGTG GCCGAGGTCTACTCGGTGAC
Product: metallo-beta-lactamase
Products: NA
Alternate protein names: Beta-Lactamase Domain-Containing Protein
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MPWRPVGHGVEALYLATPLGRRVGYGVYVYRYRGLLVDTGPPKARPFAPEAALLTHAHEDHAGGASRLGLPVYGSALTAA LVAAPKPLRLYRRLVWGSPRPAQVEAAERVGPLHLLPTPGHAPDHVALYDPEAGLFFGGDLFLGVRASLATPGFDLQALL QSLRRALALKPRAFYCAHAGPLQAPLEALQAKLDFLEGKREEALRLKARGLTPKEALRRLFGGESPLALLSGGEMSRLAF VEALMMEP
Sequences:
>Translated_248_residues MPWRPVGHGVEALYLATPLGRRVGYGVYVYRYRGLLVDTGPPKARPFAPEAALLTHAHEDHAGGASRLGLPVYGSALTAA LVAAPKPLRLYRRLVWGSPRPAQVEAAERVGPLHLLPTPGHAPDHVALYDPEAGLFFGGDLFLGVRASLATPGFDLQALL QSLRRALALKPRAFYCAHAGPLQAPLEALQAKLDFLEGKREEALRLKARGLTPKEALRRLFGGESPLALLSGGEMSRLAF VEALMMEP >Mature_247_residues PWRPVGHGVEALYLATPLGRRVGYGVYVYRYRGLLVDTGPPKARPFAPEAALLTHAHEDHAGGASRLGLPVYGSALTAAL VAAPKPLRLYRRLVWGSPRPAQVEAAERVGPLHLLPTPGHAPDHVALYDPEAGLFFGGDLFLGVRASLATPGFDLQALLQ SLRRALALKPRAFYCAHAGPLQAPLEALQAKLDFLEGKREEALRLKARGLTPKEALRRLFGGESPLALLSGGEMSRLAFV EALMMEP
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26727; Mature: 26596
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWRPVGHGVEALYLATPLGRRVGYGVYVYRYRGLLVDTGPPKARPFAPEAALLTHAHED CCCCCCCCCCEEEEEECCHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHCCCC HAGGASRLGLPVYGSALTAALVAAPKPLRLYRRLVWGSPRPAQVEAAERVGPLHLLPTPG CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCEEEECCCC HAPDHVALYDPEAGLFFGGDLFLGVRASLATPGFDLQALLQSLRRALALKPRAFYCAHAG CCCCEEEEECCCCCEEECCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCC PLQAPLEALQAKLDFLEGKREEALRLKARGLTPKEALRRLFGGESPLALLSGGEMSRLAF CHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHH VEALMMEP HHHHHCCC >Mature Secondary Structure PWRPVGHGVEALYLATPLGRRVGYGVYVYRYRGLLVDTGPPKARPFAPEAALLTHAHED CCCCCCCCCEEEEEECCHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHCCCC HAGGASRLGLPVYGSALTAALVAAPKPLRLYRRLVWGSPRPAQVEAAERVGPLHLLPTPG CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCEEEECCCC HAPDHVALYDPEAGLFFGGDLFLGVRASLATPGFDLQALLQSLRRALALKPRAFYCAHAG CCCCEEEEECCCCCEEECCCEEEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCC PLQAPLEALQAKLDFLEGKREEALRLKARGLTPKEALRRLFGGESPLALLSGGEMSRLAF CHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHH VEALMMEP HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA