| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is glpE [H]
Identifier: 55980805
GI number: 55980805
Start: 801468
End: 802124
Strand: Reverse
Name: glpE [H]
Synonym: TTHA0836
Alternate gene names: 55980805
Gene position: 802124-801468 (Counterclockwise)
Preceding gene: 55980806
Following gene: 55980804
Centisome position: 43.36
GC content: 68.95
Gene sequence:
>657_bases ATGTACGAGACCCAGGTGCAAGAACTTTCCCCCGAAGAGGCCAAGCGGCTTTACGACCAAGGGGTGCCCTTTTTTGACGT GCGCGAGGTGGAGGAGTACGCCCAGGCCCGGATCCCCGGGGCCCGACTCCTCCCCCTTTCCGAGTTCATGGCCCGCTACG GGGAGATCCCCAAGGACACCCCGGTGGTCCTCTACTGCCGCACGGGCAACCGCTCCTGGCAGGCGGCGGCCTGGCTCAGC GCCCAGGGCTACCGGGTGTACAACCTCGAGGGCGGCATCGTCCGCTGGTACCGGGCGGGCCTCCCCGTGGACACCACGCC CATGGAAGCGGCCTACAGGGCCACGCCCTACCAGGAGGTGGGGCCGGAAGAGGCGAAGGCTCTCCTGGAGGAGGCCTTCG TGGTGGACGTGCGGGAGGCGTGGGAGTACGGGGAGGGCCACGTCCCGGGCGCCGTGAACATCCCCCTCTCCACCCTGCCC CAGAGGCTTGCCGAGCTTCCCAAGGACAGGCCCATCCTCCTCGTGTGCAACTCGGGGAACCGCTCGGGCGTGGCGGCGGA GTTCCTCGTGGCCCAGGGGTTTGACGGGGAAAGGGTCTACAACCTCGAGGGGGGCACCTACGCCTGGGCGTCCCGGGGCC TCCCTCTAGAGCGGTAA
Upstream 100 bases:
>100_bases GGGCTTCCCCGTGGTGCAGGGCGAGGAACTGGTGCAGGCCTAAGCGAGCCCACCCCGGCCTGGGCCGGGGTGGGCCGCCC AGACCCCAAGGAGGTTTTCC
Downstream 100 bases:
>100_bases GATGACGCTTCCTGCCCTCGTGGGCGCCCTCCTCATCGGCCTCTCCCTGGGGCTTTTGGGCTCGGGGGGGTCCATCCTCA CCGTGCCCGTCCTCGTCTAC
Product: rhodanese-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MYETQVQELSPEEAKRLYDQGVPFFDVREVEEYAQARIPGARLLPLSEFMARYGEIPKDTPVVLYCRTGNRSWQAAAWLS AQGYRVYNLEGGIVRWYRAGLPVDTTPMEAAYRATPYQEVGPEEAKALLEEAFVVDVREAWEYGEGHVPGAVNIPLSTLP QRLAELPKDRPILLVCNSGNRSGVAAEFLVAQGFDGERVYNLEGGTYAWASRGLPLER
Sequences:
>Translated_218_residues MYETQVQELSPEEAKRLYDQGVPFFDVREVEEYAQARIPGARLLPLSEFMARYGEIPKDTPVVLYCRTGNRSWQAAAWLS AQGYRVYNLEGGIVRWYRAGLPVDTTPMEAAYRATPYQEVGPEEAKALLEEAFVVDVREAWEYGEGHVPGAVNIPLSTLP QRLAELPKDRPILLVCNSGNRSGVAAEFLVAQGFDGERVYNLEGGTYAWASRGLPLER >Mature_218_residues MYETQVQELSPEEAKRLYDQGVPFFDVREVEEYAQARIPGARLLPLSEFMARYGEIPKDTPVVLYCRTGNRSWQAAAWLS AQGYRVYNLEGGIVRWYRAGLPVDTTPMEAAYRATPYQEVGPEEAKALLEEAFVVDVREAWEYGEGHVPGAVNIPLSTLP QRLAELPKDRPILLVCNSGNRSGVAAEFLVAQGFDGERVYNLEGGTYAWASRGLPLER
Specific function: Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide [H]
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.1 [H]
Molecular weight: Translated: 24432; Mature: 24432
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYETQVQELSPEEAKRLYDQGVPFFDVREVEEYAQARIPGARLLPLSEFMARYGEIPKDT CCCCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEECCHHHHHHHHCCCCCCC PVVLYCRTGNRSWQAAAWLSAQGYRVYNLEGGIVRWYRAGLPVDTTPMEAAYRATPYQEV CEEEEEECCCCCEEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHCCCHHHC GPEEAKALLEEAFVVDVREAWEYGEGHVPGAVNIPLSTLPQRLAELPKDRPILLVCNSGN CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEEECCCC RSGVAAEFLVAQGFDGERVYNLEGGTYAWASRGLPLER CCCHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCC >Mature Secondary Structure MYETQVQELSPEEAKRLYDQGVPFFDVREVEEYAQARIPGARLLPLSEFMARYGEIPKDT CCCCCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEECCHHHHHHHHCCCCCCC PVVLYCRTGNRSWQAAAWLSAQGYRVYNLEGGIVRWYRAGLPVDTTPMEAAYRATPYQEV CEEEEEECCCCCEEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCHHHHHHCCCHHHC GPEEAKALLEEAFVVDVREAWEYGEGHVPGAVNIPLSTLPQRLAELPKDRPILLVCNSGN CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEEECCCC RSGVAAEFLVAQGFDGERVYNLEGGTYAWASRGLPLER CCCHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA