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The map label for this gene is yebC [C]

Identifier: 55980790

GI number: 55980790

Start: 785317

End: 786051

Strand: Reverse

Name: yebC [C]

Synonym: TTHA0821

Alternate gene names: 55980790

Gene position: 786051-785317 (Counterclockwise)

Preceding gene: 55980791

Following gene: 55980789

Centisome position: 42.5

GC content: 67.76

Gene sequence:

>735_bases
ATGGCCGGTCACAGCAAATGGGCTCAGATTAAGCGCAAGAAGGCCGCGAACGACCTGAAGCGCGGCAAGCTCATCTCCAA
GCACCTGCGGGCCATCCAGGCGGCGGCCCGCGCCGGGGGAAGCCCTTACCCCGAGGCCAATGTCCAGCTGAGAAACGCCA
TTGAGGCCGCCCGGGCCGACGACGTGCCCATGGAGAACATTGAGCGCCTCCTGCAGAAGCTCCAAGGCGGCGGGGAAGGC
GCCGAGCAGTACGAGGAGATCGTCTACGAGGGGTACGCCCCCGGCGGGGTGGCCCTTCTGGTCTACGCCCTCACCGACAA
CCGCAACCGCACCGCAAGCGAGGTGCGCCACGTCTTCAGCAAGCACGGGGGCTCCCTGGGCACCACGGGGAGCGTGGCCT
GGCAGTTTGAGCGGCGGGGCGTGGTCGTCTGTGAGAACACCGAGGCGGCCCAGGAGGCGGCCATTGAGCTCGGCGCCCTG
GACCTGGAGGAGGAAGGGGAAAACCTCACCGTCTACACCGAGCCCACGGAGGCCTACCGGATCGCCGAGGCCCTGAAGGC
CAAGGGGGTGCGGGTGGAGGCGGTGGAGGTGGTGCAGCACCCCCAGAACACCGTCGCCCTCCCCCCGGAGGAAGCCCAGA
AGGTGATGCGGCTCGTGGAGGCCCTGGAAGACCTGGACGACGTCCAGCACGTCTACACCAACCTGGACCCCGAGAGCCTC
CAGGTAGAGGCTTAA

Upstream 100 bases:

>100_bases
CAGGAAGGGGCCCACCTCATCTTCCATCCGTTCCAAGAAGCGGGGGAAAGGCTTGGGGAGCGGGTCCTGGAGAGCCTCGC
TATAATGGGTAAGGTGAACT

Downstream 100 bases:

>100_bases
GCCCCCCTGCCCGGGCTCCGCAACACGGAACCCTGGCTAAGGGGCCCGGGGACTTTTTGCCGGGGCCCCCATGCGGGCAG
AAGTCGGCATGGGGTGGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MAGHSKWAQIKRKKAANDLKRGKLISKHLRAIQAAARAGGSPYPEANVQLRNAIEAARADDVPMENIERLLQKLQGGGEG
AEQYEEIVYEGYAPGGVALLVYALTDNRNRTASEVRHVFSKHGGSLGTTGSVAWQFERRGVVVCENTEAAQEAAIELGAL
DLEEEGENLTVYTEPTEAYRIAEALKAKGVRVEAVEVVQHPQNTVALPPEEAQKVMRLVEALEDLDDVQHVYTNLDPESL
QVEA

Sequences:

>Translated_244_residues
MAGHSKWAQIKRKKAANDLKRGKLISKHLRAIQAAARAGGSPYPEANVQLRNAIEAARADDVPMENIERLLQKLQGGGEG
AEQYEEIVYEGYAPGGVALLVYALTDNRNRTASEVRHVFSKHGGSLGTTGSVAWQFERRGVVVCENTEAAQEAAIELGAL
DLEEEGENLTVYTEPTEAYRIAEALKAKGVRVEAVEVVQHPQNTVALPPEEAQKVMRLVEALEDLDDVQHVYTNLDPESL
QVEA
>Mature_243_residues
AGHSKWAQIKRKKAANDLKRGKLISKHLRAIQAAARAGGSPYPEANVQLRNAIEAARADDVPMENIERLLQKLQGGGEGA
EQYEEIVYEGYAPGGVALLVYALTDNRNRTASEVRHVFSKHGGSLGTTGSVAWQFERRGVVVCENTEAAQEAAIELGALD
LEEEGENLTVYTEPTEAYRIAEALKAKGVRVEAVEVVQHPQNTVALPPEEAQKVMRLVEALEDLDDVQHVYTNLDPESLQ
VEA

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=249, Percent_Identity=30.1204819277108, Blast_Score=118, Evalue=6e-27,
Organism=Escherichia coli, GI1788171, Length=237, Percent_Identity=43.8818565400844, Blast_Score=197, Evalue=4e-52,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=39.1489361702128, Blast_Score=152, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17556100, Length=249, Percent_Identity=28.1124497991968, Blast_Score=92, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=31.1787072243346, Blast_Score=121, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24583305, Length=248, Percent_Identity=30.241935483871, Blast_Score=91, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y469_THET2 (P62041)

Other databases:

- EMBL:   AE017221
- RefSeq:   YP_004444.1
- ProteinModelPortal:   P62041
- SMR:   P62041
- STRING:   P62041
- GeneID:   2776072
- GenomeReviews:   AE017221_GR
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- PhylomeDB:   P62041
- ProtClustDB:   PRK00110
- BioCyc:   TTHE262724:TT_C0469-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26664; Mature: 26533

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWAQIKRKKAANDLKRGKLISKHLRAIQAAARAGGSPYPEANVQLRNAIEAARAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
DVPMENIERLLQKLQGGGEGAEQYEEIVYEGYAPGGVALLVYALTDNRNRTASEVRHVFS
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHEEEEEECCCCCCHHHHHHHHHH
KHGGSLGTTGSVAWQFERRGVVVCENTEAAQEAAIELGALDLEEEGENLTVYTEPTEAYR
HCCCCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHH
IAEALKAKGVRVEAVEVVQHPQNTVALPPEEAQKVMRLVEALEDLDDVQHVYTNLDPESL
HHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHE
QVEA
EECC
>Mature Secondary Structure 
AGHSKWAQIKRKKAANDLKRGKLISKHLRAIQAAARAGGSPYPEANVQLRNAIEAARAD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
DVPMENIERLLQKLQGGGEGAEQYEEIVYEGYAPGGVALLVYALTDNRNRTASEVRHVFS
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHEEEEEECCCCCCHHHHHHHHHH
KHGGSLGTTGSVAWQFERRGVVVCENTEAAQEAAIELGALDLEEEGENLTVYTEPTEAYR
HCCCCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHH
IAEALKAKGVRVEAVEVVQHPQNTVALPPEEAQKVMRLVEALEDLDDVQHVYTNLDPESL
HHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHE
QVEA
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA