| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980786
Identifier: 55980786
GI number: 55980786
Start: 780950
End: 782707
Strand: Reverse
Name: 55980786
Synonym: TTHA0817
Alternate gene names: NA
Gene position: 782707-780950 (Counterclockwise)
Preceding gene: 55980787
Following gene: 55980785
Centisome position: 42.31
GC content: 73.72
Gene sequence:
>1758_bases ATGGAAAGGCCCCTTCCTCCACCCCTTGACGCCCTCCCCGAGGAGGCGGCCCGGGCCTTCCTCGCCCGGGGGGAGGAGGT CGTGGCCGAGGAGGGGGAGGTCCTCCTCGAGGCCCAAGGCCCCCCCGCGACCCACCTCTACCTGGTCCTCGAGGGGGAGG TGGCCCTGGAGGAAGAGGGCGAGGAGGTGGAGCGGCTTGGCCCCGGGAGCTTCTTCGGCTACCCCTCCCTGCTCTCCGGG GCGAGCCCCGTCTTCACCGTGCGGGCCAGGGGGAAGACCCGCCTCCTCCGCTTCCCCAAGGAGGCCTTTGAGGCCCTCCT CGCCTACCCCGAGGCGGCCCGCTTCTTTGGCCGGGGGGTGGCGGAGCGCCTCCGGCTGCGGCCGGAGAGGGTCCTGGAGC CGGGCCTCGCCCGGCCCGTGGGGGAGCTGGTGCAGCGCCCCCCCGTCTTCGTGGACCCCACCGCCTCCGTGGAGGAGGCG GCCCGGCGCATGCGGGAGGAGGGGATCTCCAGCCTCCTCGTCCGGGGGGAGCCCCTGGGCATCCTCACGGACCGGGACCT GAGGAACCGGGTCCTGGCCGAGGGGCTTCCCCCCTCCACCCCGGTGGGCCAGGTGGCCACCCGGCCCACCTTCACCCTCC CCGCCGACACCCCCCTCCTGGAGGCGGTGGCCGCCATGCTGGAGCGCCGGATCCACCACCTCCCCCTCACCCGGGGGGAG GAGGTGGTGGGGGTGGTCACCCACACGGACCTCCTCGCCCACCAGGCGCAAAGCCCCCTGGCCCTCCTCCGGCGGGTGGA ACGGCTGGAGCTCGCCCGCTACGGGGAGGAGGTGGCCCGGCTGGTGGCGGGCCTGTTCCAGGCGGGGGTCCCCGCCTTGG AGATCGGGCGGGTGGTGGCGGGGCTGAACGACGCCCTGATCCGCCGCCTCCTCCAGGAGGCGGAGCGGACCTTGGGCCCC CCGCCCGTCCCCTACGCCTTCTTCGTCTTCGGCTCCGAGGGCAGGAAGGAACAGGCCCTCCTCACCGACCAGGACAACGC CCTGGCCCTCGCCGAGGAGGGGCACGAGGCCTACTTCCAGGCCCTGGCCGAGCGGGTGGTGGAGGGGCTCGTGGCGGCGG GCATCCCCCCCTGCCCCGGGGGGTACATGGCCACCCGCTGGCGCTTAAGCCTTGCCCGCTGGCAGGAGGTCTTCGCCCGC TGGATGGAGGCCCCCGAGCCCCAGGCCCTCCTGGACGCCCAGATCTTCTTTGACCTCCGCCCCGTGGGAGGGAGCCTCTC CTTGGCGGCGTTGGAGCGGCTCATCCAGGAGAAGGCCAAGGCCGGGGTCTTCCTCTACCACCTGGCCCAGGCGGCCCTCG CCTTCCGCCCGCCCTTGGGCCTCTTCGGCCGGGTGCGCACGGAGGAGGGGTTTATTGACCTCAAGCGGCACGCCCTCGCC CCCATCGTGAGCCTCGCCCGGGTCTACGCCCTCATGGCGGGAAGCCCCGCGCGGCGCACCCCGGAGCGGCTTAAGCAGGG GGCGGAGAAGGGGGCCGTGAGCCTGGAGCTCGCCGAGAGGCTGGAGGAGGCCTACGCCTTCTTCTTCCACCTCCGCCTCA AGGCCCAGCTCCAGGCCCTGAAAGAGGGCAGGCCCCCGGGCAACCGCGTGGTCTACAAGGCCCTCTCCCCCCTGGAAAGG CGCCGGGCCCTCGAGGGGTTCCGCGCCATCCTCGAGGCCCAGGAGGCCCTGGCCCTCCGCTTCCAGATCCGGCTATGA
Upstream 100 bases:
>100_bases CCCCCCGCCTTCATGCTGGGCATCGGCCTCCTCGTCCTCCTCCAGGCCCAGGTGGCCCTGCCCTACCTGGTGCCCCTCCT GGCCTGGCTCACTCCCGACT
Downstream 100 bases:
>100_bases AGGCGCGAAGCCTGGCCCTCTTCCTCCTCGGCCTCCTCCTCTTCGCCTCCCCCTTCGCCCTCTTCTTCCCCGAGCCTTTA GGGCCCTGGGGGCTCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: OrfX [H]
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MERPLPPPLDALPEEAARAFLARGEEVVAEEGEVLLEAQGPPATHLYLVLEGEVALEEEGEEVERLGPGSFFGYPSLLSG ASPVFTVRARGKTRLLRFPKEAFEALLAYPEAARFFGRGVAERLRLRPERVLEPGLARPVGELVQRPPVFVDPTASVEEA ARRMREEGISSLLVRGEPLGILTDRDLRNRVLAEGLPPSTPVGQVATRPTFTLPADTPLLEAVAAMLERRIHHLPLTRGE EVVGVVTHTDLLAHQAQSPLALLRRVERLELARYGEEVARLVAGLFQAGVPALEIGRVVAGLNDALIRRLLQEAERTLGP PPVPYAFFVFGSEGRKEQALLTDQDNALALAEEGHEAYFQALAERVVEGLVAAGIPPCPGGYMATRWRLSLARWQEVFAR WMEAPEPQALLDAQIFFDLRPVGGSLSLAALERLIQEKAKAGVFLYHLAQAALAFRPPLGLFGRVRTEEGFIDLKRHALA PIVSLARVYALMAGSPARRTPERLKQGAEKGAVSLELAERLEEAYAFFFHLRLKAQLQALKEGRPPGNRVVYKALSPLER RRALEGFRAILEAQEALALRFQIRL
Sequences:
>Translated_585_residues MERPLPPPLDALPEEAARAFLARGEEVVAEEGEVLLEAQGPPATHLYLVLEGEVALEEEGEEVERLGPGSFFGYPSLLSG ASPVFTVRARGKTRLLRFPKEAFEALLAYPEAARFFGRGVAERLRLRPERVLEPGLARPVGELVQRPPVFVDPTASVEEA ARRMREEGISSLLVRGEPLGILTDRDLRNRVLAEGLPPSTPVGQVATRPTFTLPADTPLLEAVAAMLERRIHHLPLTRGE EVVGVVTHTDLLAHQAQSPLALLRRVERLELARYGEEVARLVAGLFQAGVPALEIGRVVAGLNDALIRRLLQEAERTLGP PPVPYAFFVFGSEGRKEQALLTDQDNALALAEEGHEAYFQALAERVVEGLVAAGIPPCPGGYMATRWRLSLARWQEVFAR WMEAPEPQALLDAQIFFDLRPVGGSLSLAALERLIQEKAKAGVFLYHLAQAALAFRPPLGLFGRVRTEEGFIDLKRHALA PIVSLARVYALMAGSPARRTPERLKQGAEKGAVSLELAERLEEAYAFFFHLRLKAQLQALKEGRPPGNRVVYKALSPLER RRALEGFRAILEAQEALALRFQIRL >Mature_585_residues MERPLPPPLDALPEEAARAFLARGEEVVAEEGEVLLEAQGPPATHLYLVLEGEVALEEEGEEVERLGPGSFFGYPSLLSG ASPVFTVRARGKTRLLRFPKEAFEALLAYPEAARFFGRGVAERLRLRPERVLEPGLARPVGELVQRPPVFVDPTASVEEA ARRMREEGISSLLVRGEPLGILTDRDLRNRVLAEGLPPSTPVGQVATRPTFTLPADTPLLEAVAAMLERRIHHLPLTRGE EVVGVVTHTDLLAHQAQSPLALLRRVERLELARYGEEVARLVAGLFQAGVPALEIGRVVAGLNDALIRRLLQEAERTLGP PPVPYAFFVFGSEGRKEQALLTDQDNALALAEEGHEAYFQALAERVVEGLVAAGIPPCPGGYMATRWRLSLARWQEVFAR WMEAPEPQALLDAQIFFDLRPVGGSLSLAALERLIQEKAKAGVFLYHLAQAALAFRPPLGLFGRVRTEEGFIDLKRHALA PIVSLARVYALMAGSPARRTPERLKQGAEKGAVSLELAERLEEAYAFFFHLRLKAQLQALKEGRPPGNRVVYKALSPLER RRALEGFRAILEAQEALALRFQIRL
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 64426; Mature: 64426
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERPLPPPLDALPEEAARAFLARGEEVVAEEGEVLLEAQGPPATHLYLVLEGEVALEEEG CCCCCCCCHHCCHHHHHHHHHHCCHHHHHCCCCEEEEECCCCCEEEEEEEECCEEECCCC EEVERLGPGSFFGYPSLLSGASPVFTVRARGKTRLLRFPKEAFEALLAYPEAARFFGRGV HHHHHCCCCCCCCCHHHHCCCCCEEEEEECCCHHHHHCCHHHHHHHHHCHHHHHHHHHHH AERLRLRPERVLEPGLARPVGELVQRPPVFVDPTASVEEAARRMREEGISSLLVRGEPLG HHHHHCCHHHHCCCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCE ILTDRDLRNRVLAEGLPPSTPVGQVATRPTFTLPADTPLLEAVAAMLERRIHHLPLTRGE EECCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCC EVVGVVTHTDLLAHQAQSPLALLRRVERLELARYGEEVARLVAGLFQAGVPALEIGRVVA CEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GLNDALIRRLLQEAERTLGPPPVPYAFFVFGSEGRKEQALLTDQDNALALAEEGHEAYFQ CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEECCCCCEEEHHCCHHHHHH ALAERVVEGLVAAGIPPCPGGYMATRWRLSLARWQEVFARWMEAPEPQALLDAQIFFDLR HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEE PVGGSLSLAALERLIQEKAKAGVFLYHLAQAALAFRPPLGLFGRVRTEEGFIDLKRHALA CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHH PIVSLARVYALMAGSPARRTPERLKQGAEKGAVSLELAERLEEAYAFFFHLRLKAQLQAL HHHHHHHHHHHHCCCCCCCCHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KEGRPPGNRVVYKALSPLERRRALEGFRAILEAQEALALRFQIRL HCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MERPLPPPLDALPEEAARAFLARGEEVVAEEGEVLLEAQGPPATHLYLVLEGEVALEEEG CCCCCCCCHHCCHHHHHHHHHHCCHHHHHCCCCEEEEECCCCCEEEEEEEECCEEECCCC EEVERLGPGSFFGYPSLLSGASPVFTVRARGKTRLLRFPKEAFEALLAYPEAARFFGRGV HHHHHCCCCCCCCCHHHHCCCCCEEEEEECCCHHHHHCCHHHHHHHHHCHHHHHHHHHHH AERLRLRPERVLEPGLARPVGELVQRPPVFVDPTASVEEAARRMREEGISSLLVRGEPLG HHHHHCCHHHHCCCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCE ILTDRDLRNRVLAEGLPPSTPVGQVATRPTFTLPADTPLLEAVAAMLERRIHHLPLTRGE EECCCHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCC EVVGVVTHTDLLAHQAQSPLALLRRVERLELARYGEEVARLVAGLFQAGVPALEIGRVVA CEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH GLNDALIRRLLQEAERTLGPPPVPYAFFVFGSEGRKEQALLTDQDNALALAEEGHEAYFQ CCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEECCCCCEEEHHCCHHHHHH ALAERVVEGLVAAGIPPCPGGYMATRWRLSLARWQEVFARWMEAPEPQALLDAQIFFDLR HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEE PVGGSLSLAALERLIQEKAKAGVFLYHLAQAALAFRPPLGLFGRVRTEEGFIDLKRHALA CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHH PIVSLARVYALMAGSPARRTPERLKQGAEKGAVSLELAERLEEAYAFFFHLRLKAQLQAL HHHHHHHHHHHHCCCCCCCCHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH KEGRPPGNRVVYKALSPLERRRALEGFRAILEAQEALALRFQIRL HCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014; 8522533 [H]