| Definition | Thermus thermophilus HB8 chromosome, complete genome. |
|---|---|
| Accession | NC_006461 |
| Length | 1,849,742 |
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The map label for this gene is 55980711
Identifier: 55980711
GI number: 55980711
Start: 708973
End: 710205
Strand: Reverse
Name: 55980711
Synonym: TTHA0742
Alternate gene names: NA
Gene position: 710205-708973 (Counterclockwise)
Preceding gene: 55980712
Following gene: 55980710
Centisome position: 38.39
GC content: 69.18
Gene sequence:
>1233_bases GTGGCCGCCCTTGCCCTCGTTCAGGAAGGGTATCTGAGCCACGCCAACGCCGCTTACTTGGGAAAAGTTTACACTGCTCT GGACCGGGGCAAGCTGGAAACCCTGGGCTTCAGCTACCCGCCCCTCCCCCTGCTCCTCCTCCTTCCCTGGCCCTCTCCCT GGGCCCCGGCGGTCCTCGGCGCCTTAGCGCTGGGCCTCGGCTTCGGCCTTCTTCTGACGGAGGCGCGGCGGCGGAGCGAG CCCCTTCTCCTCGTACTATTCGCGGGGTTTCTCCTCTCCCCCGCGCCCTTCTACCTGGTGGCCGAGGACCTGGCCCAGAC CCTCGGCCTCGTCTTTCTCTGGTGGGCCTGGACGTTCTACCGGCGCTGGCTAGACGAGGGCCTCTCCTTTCACCTCTTCG CCTCCGGGCTCGTCCTCGGAGCCGCCGTCTACACCACCCCCATCGCCCTTCCCCTGGGGCTCTTTTTCGCCCTGGGCCTC GGCCTCTTCCGCAGGTTGGAGCCCCCGGCCTGGGCCGCAGCGAGTCTCGTCCTCCTCTTTCCCCTCCTCTCCACCCTTTT CGCCTGGGGCTACCTCTCCTGGACCTTCACCGGGGAAACCGCCTTCCTCTACGCAGCCCTGCCCAAGGAAACGCCCTCAC TAGGAACCGTCCTCCTTGCAAGCCCGGCCTACCTGGGAATGGGGCTTCTGATCCTTCTCCGCCCGCGGGCAAGCTTCCTC CTCTACCCCGTGCCCCTTCTCCTTTTCCTCGCCCTCCCCCCTTTAGGCTTTGGCTACACACTCCCCTTGGCCGTAGGCCT CCTCTTCCTCTTCGCCCTAGGGGGGCTTCCCCGCCTCGCCCTGGGCCCCAGGATCCGGGCCGTGGGTCTTGGCCTCGCCC TCCTCCAGGCCGCCTTGGGATGGGCCCTCCTACCCTCCCCTGAGCCCCCTCCCGATGCCCTGGAGCGGGCCATCGGCCAA GCCTTGGCCCAGGCGCCTCCCCGCTCCATCCTGGCCGACGACCGGGAGAGCTACCGCCTGCTGGCCTGGGCGGGCACCGC CCGGCCTTTCCTCCTCCCCCCGGACGCCGGCTTTACCCTGGCCCTCTCTGCCCCAAGCCTTTACGTGGACCGCGTCCTCG TCTGCCCGGGCGCAGGCGCCCTGTACCGCCGCTACGGCGAGGACGACCCTCCGGGCTTTCGCGAGGTCTGGCGGTACAAG GGGTGCCGGCTCCTGGAGCGGCGCCCCTCCTAG
Upstream 100 bases:
>100_bases TGGGAGAAGACCCTCCATGGCCTCAGCAAGCAGGAAGCGCCCCAGCCTGAGCCTGCCCCTTGAACCCCTCCTCGGCCTCC TCCTCGCCCTTCCCGTAGGG
Downstream 100 bases:
>100_bases GGACCCGAGTGCGCCCTTGACTTTGCCCGAGGGAGCCCGGAGGATGGTGAGGATGGACCTAAGCCGCATCCGCAACTTCT CCATCATCGCCCACGTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MAALALVQEGYLSHANAAYLGKVYTALDRGKLETLGFSYPPLPLLLLLPWPSPWAPAVLGALALGLGFGLLLTEARRRSE PLLLVLFAGFLLSPAPFYLVAEDLAQTLGLVFLWWAWTFYRRWLDEGLSFHLFASGLVLGAAVYTTPIALPLGLFFALGL GLFRRLEPPAWAAASLVLLFPLLSTLFAWGYLSWTFTGETAFLYAALPKETPSLGTVLLASPAYLGMGLLILLRPRASFL LYPVPLLLFLALPPLGFGYTLPLAVGLLFLFALGGLPRLALGPRIRAVGLGLALLQAALGWALLPSPEPPPDALERAIGQ ALAQAPPRSILADDRESYRLLAWAGTARPFLLPPDAGFTLALSAPSLYVDRVLVCPGAGALYRRYGEDDPPGFREVWRYK GCRLLERRPS
Sequences:
>Translated_410_residues MAALALVQEGYLSHANAAYLGKVYTALDRGKLETLGFSYPPLPLLLLLPWPSPWAPAVLGALALGLGFGLLLTEARRRSE PLLLVLFAGFLLSPAPFYLVAEDLAQTLGLVFLWWAWTFYRRWLDEGLSFHLFASGLVLGAAVYTTPIALPLGLFFALGL GLFRRLEPPAWAAASLVLLFPLLSTLFAWGYLSWTFTGETAFLYAALPKETPSLGTVLLASPAYLGMGLLILLRPRASFL LYPVPLLLFLALPPLGFGYTLPLAVGLLFLFALGGLPRLALGPRIRAVGLGLALLQAALGWALLPSPEPPPDALERAIGQ ALAQAPPRSILADDRESYRLLAWAGTARPFLLPPDAGFTLALSAPSLYVDRVLVCPGAGALYRRYGEDDPPGFREVWRYK GCRLLERRPS >Mature_409_residues AALALVQEGYLSHANAAYLGKVYTALDRGKLETLGFSYPPLPLLLLLPWPSPWAPAVLGALALGLGFGLLLTEARRRSEP LLLVLFAGFLLSPAPFYLVAEDLAQTLGLVFLWWAWTFYRRWLDEGLSFHLFASGLVLGAAVYTTPIALPLGLFFALGLG LFRRLEPPAWAAASLVLLFPLLSTLFAWGYLSWTFTGETAFLYAALPKETPSLGTVLLASPAYLGMGLLILLRPRASFLL YPVPLLLFLALPPLGFGYTLPLAVGLLFLFALGGLPRLALGPRIRAVGLGLALLQAALGWALLPSPEPPPDALERAIGQA LAQAPPRSILADDRESYRLLAWAGTARPFLLPPDAGFTLALSAPSLYVDRVLVCPGAGALYRRYGEDDPPGFREVWRYKG CRLLERRPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44461; Mature: 44330
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALALVQEGYLSHANAAYLGKVYTALDRGKLETLGFSYPPLPLLLLLPWPSPWAPAVLG CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEECCCCCHHHHHHH ALALGLGFGLLLTEARRRSEPLLLVLFAGFLLSPAPFYLVAEDLAQTLGLVFLWWAWTFY HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RRWLDEGLSFHLFASGLVLGAAVYTTPIALPLGLFFALGLGLFRRLEPPAWAAASLVLLF HHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH PLLSTLFAWGYLSWTFTGETAFLYAALPKETPSLGTVLLASPAYLGMGLLILLRPRASFL HHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHHEECCCCHHH LYPVPLLLFLALPPLGFGYTLPLAVGLLFLFALGGLPRLALGPRIRAVGLGLALLQAALG HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHC WALLPSPEPPPDALERAIGQALAQAPPRSILADDRESYRLLAWAGTARPFLLPPDAGFTL CEECCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEEECCCCCEEECCCCCEEE ALSAPSLYVDRVLVCPGAGALYRRYGEDDPPGFREVWRYKGCRLLERRPS EECCCHHHHCEEEECCCCCHHHHHCCCCCCCCHHHHHHHCCCHHHCCCCC >Mature Secondary Structure AALALVQEGYLSHANAAYLGKVYTALDRGKLETLGFSYPPLPLLLLLPWPSPWAPAVLG CHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEECCCCCHHHHHHH ALALGLGFGLLLTEARRRSEPLLLVLFAGFLLSPAPFYLVAEDLAQTLGLVFLWWAWTFY HHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RRWLDEGLSFHLFASGLVLGAAVYTTPIALPLGLFFALGLGLFRRLEPPAWAAASLVLLF HHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH PLLSTLFAWGYLSWTFTGETAFLYAALPKETPSLGTVLLASPAYLGMGLLILLRPRASFL HHHHHHHHHHHHEEEEECCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHHEECCCCHHH LYPVPLLLFLALPPLGFGYTLPLAVGLLFLFALGGLPRLALGPRIRAVGLGLALLQAALG HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHC WALLPSPEPPPDALERAIGQALAQAPPRSILADDRESYRLLAWAGTARPFLLPPDAGFTL CEECCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEEECCCCCEEECCCCCEEE ALSAPSLYVDRVLVCPGAGALYRRYGEDDPPGFREVWRYKGCRLLERRPS EECCCHHHHCEEEECCCCCHHHHHCCCCCCCCHHHHHHHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA