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The map label for this gene is yjeF [H]

Identifier: 54295541

GI number: 54295541

Start: 3000001

End: 3001482

Strand: Reverse

Name: yjeF [H]

Synonym: lpl2628

Alternate gene names: 54295541

Gene position: 3001482-3000001 (Counterclockwise)

Preceding gene: 54295542

Following gene: 54295540

Centisome position: 89.71

GC content: 44.6

Gene sequence:

>1482_bases
GTGAACAAGCTAGAAAATGCTCTGTATCGTTGTGATCAAATTAAAGCTTGTGAACAGCAAGCTGCAACTTTGTATCAAAA
AGACGAAAATGCCCTGATGGCTCTGGCTGGCGCAGAGGCATTTTCTTTCTTACAGAAACTCTACCCGCATGTACGGCATA
TAGCCGTCTTCTGTGGTGCTGGCAATAATGCAGGTGATGGTTATGTCTTGGCCAGATTAGCTCATGAACAAGGATTCTCA
GTTACTGTATATCAATGTAAATCAATAGAAGATTTACCTTCTGCTGCCAGGAATGCCGCACGCCTGGCATTGGCATCTGG
AGTGCATTGTCAATCCGCAGATGAACCTTTAGATGTCGATGCCGAATTAATTGTTGATGCATTATTGGGTATTGGATTAC
AAGGAGCAGTGCATGGGGTAATAGCCAACGCAATTCATCAAATCAATGCCAGTGGGTTACCGGTATTATCGATTGATATT
CCATCTGGTCTTAATGCGGATACAGGATTAGTAGAGAATATTTGCGTCAATGCGACTGCCACAATTACTTTTATCGGACT
TAAAACAGGAATGTATACTTTGGACGGACCAGATTATTGTGGTGTGATTCATTGTGCTCATTTAAACCTGGAGGCATGTA
CAACTAAATTAACCCGATTTGCTTCCCTACTGAGGGATTCTACCTTGCCATTGCCTCTCGCAGCTAGAAAAAAGAACTCC
CATAAAGGTGACTATGGACATGTTTTAGTGATAGGCGGGGGTCCTGGAATGCCGGGAGCAGTGAGCTTGGCAGCCAAGGC
AGCACTCAAGACGGGAGCAGGGGTAGTTACTGTTGCAACCTGGCCGGATTATGCGAAGAGCGCTTTACCCTTAATTCCTG
AAGCGATGATCTGGGGTGTCAAAACAGCAGGGGAGTTAACGCCTTTATTGGCAAAAGCTACGGTTTGTGTTATTGGGCCT
GGGCTTGGTGATAGTGATTGGGCCAAAACCTTGTTTTTAACTGCCATTACAACCCAATTACCCATGATCATTGATGCTTC
AGCACTGAGATTACTTTCTCAATATCCCCAAATGGATGACAATTGGATTTTAACACCTCATCCTGGCGAAGCTGCCAGTT
TGCTTTCATGTACTGCAAGAGATGTTCAAATAGATAGATACCATGCGGCATCTGCTATACAAAAACAATATGGTGGTGTT
GTGGTATTGAAAGGAGTAGGCACGGTTATTCAGACCGCGGAAAAGAATATTTTTGTGTGCCCTCAAGGCAATCCAGGTAT
GGCTACCGCAGGCATGGGGGATATTTTGAGTGGGATTATTGCCGCTTTTTGCGCCCAGGGTTTTACCTTATCCGATGCTG
CAAAGTTAGGGGTGTGGGTCCATGCTGTTGCTGGAGACAAGGTTGCTGAAAAATCAGGAGAAGTTGGGGTATTGGCGAGC
GACTTACTTGATGAAATTCCAAGCATTTTGAATTGTATCTAG

Upstream 100 bases:

>100_bases
TAGCCAAGAAGCAGTGATTTTTACAGTATGATCTTGGCATAGCGATATAAAAGTATTTTGTGGTCGTTATATCAAATTTA
CGTTAATTTGGAGCCAAGAG

Downstream 100 bases:

>100_bases
TGCGATGATTTATAAGAAGGTAACCTGAGTGTTACTGAGGTAACAAATTCTGTTTCAATACTTGTGTATAACGGTTTGGC
TGACAGGCTTTTTCTAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MNKLENALYRCDQIKACEQQAATLYQKDENALMALAGAEAFSFLQKLYPHVRHIAVFCGAGNNAGDGYVLARLAHEQGFS
VTVYQCKSIEDLPSAARNAARLALASGVHCQSADEPLDVDAELIVDALLGIGLQGAVHGVIANAIHQINASGLPVLSIDI
PSGLNADTGLVENICVNATATITFIGLKTGMYTLDGPDYCGVIHCAHLNLEACTTKLTRFASLLRDSTLPLPLAARKKNS
HKGDYGHVLVIGGGPGMPGAVSLAAKAALKTGAGVVTVATWPDYAKSALPLIPEAMIWGVKTAGELTPLLAKATVCVIGP
GLGDSDWAKTLFLTAITTQLPMIIDASALRLLSQYPQMDDNWILTPHPGEAASLLSCTARDVQIDRYHAASAIQKQYGGV
VVLKGVGTVIQTAEKNIFVCPQGNPGMATAGMGDILSGIIAAFCAQGFTLSDAAKLGVWVHAVAGDKVAEKSGEVGVLAS
DLLDEIPSILNCI

Sequences:

>Translated_493_residues
MNKLENALYRCDQIKACEQQAATLYQKDENALMALAGAEAFSFLQKLYPHVRHIAVFCGAGNNAGDGYVLARLAHEQGFS
VTVYQCKSIEDLPSAARNAARLALASGVHCQSADEPLDVDAELIVDALLGIGLQGAVHGVIANAIHQINASGLPVLSIDI
PSGLNADTGLVENICVNATATITFIGLKTGMYTLDGPDYCGVIHCAHLNLEACTTKLTRFASLLRDSTLPLPLAARKKNS
HKGDYGHVLVIGGGPGMPGAVSLAAKAALKTGAGVVTVATWPDYAKSALPLIPEAMIWGVKTAGELTPLLAKATVCVIGP
GLGDSDWAKTLFLTAITTQLPMIIDASALRLLSQYPQMDDNWILTPHPGEAASLLSCTARDVQIDRYHAASAIQKQYGGV
VVLKGVGTVIQTAEKNIFVCPQGNPGMATAGMGDILSGIIAAFCAQGFTLSDAAKLGVWVHAVAGDKVAEKSGEVGVLAS
DLLDEIPSILNCI
>Mature_493_residues
MNKLENALYRCDQIKACEQQAATLYQKDENALMALAGAEAFSFLQKLYPHVRHIAVFCGAGNNAGDGYVLARLAHEQGFS
VTVYQCKSIEDLPSAARNAARLALASGVHCQSADEPLDVDAELIVDALLGIGLQGAVHGVIANAIHQINASGLPVLSIDI
PSGLNADTGLVENICVNATATITFIGLKTGMYTLDGPDYCGVIHCAHLNLEACTTKLTRFASLLRDSTLPLPLAARKKNS
HKGDYGHVLVIGGGPGMPGAVSLAAKAALKTGAGVVTVATWPDYAKSALPLIPEAMIWGVKTAGELTPLLAKATVCVIGP
GLGDSDWAKTLFLTAITTQLPMIIDASALRLLSQYPQMDDNWILTPHPGEAASLLSCTARDVQIDRYHAASAIQKQYGGV
VVLKGVGTVIQTAEKNIFVCPQGNPGMATAGMGDILSGIIAAFCAQGFTLSDAAKLGVWVHAVAGDKVAEKSGEVGVLAS
DLLDEIPSILNCI

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI91984773, Length=175, Percent_Identity=30.8571428571429, Blast_Score=78, Evalue=2e-14,
Organism=Escherichia coli, GI1790609, Length=499, Percent_Identity=40.4809619238477, Blast_Score=323, Evalue=2e-89,
Organism=Caenorhabditis elegans, GI17509719, Length=194, Percent_Identity=29.3814432989691, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17554656, Length=277, Percent_Identity=26.3537906137184, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI221329809, Length=177, Percent_Identity=28.8135593220339, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 51443; Mature: 51443

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLENALYRCDQIKACEQQAATLYQKDENALMALAGAEAFSFLQKLYPHVRHIAVFCGA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHEEEEEEEC
GNNAGDGYVLARLAHEQGFSVTVYQCKSIEDLPSAARNAARLALASGVHCQSADEPLDVD
CCCCCCCCEEEEEHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AELIVDALLGIGLQGAVHGVIANAIHQINASGLPVLSIDIPSGLNADTGLVENICVNATA
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCEE
TITFIGLKTGMYTLDGPDYCGVIHCAHLNLEACTTKLTRFASLLRDSTLPLPLAARKKNS
EEEEEEEECCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCC
HKGDYGHVLVIGGGPGMPGAVSLAAKAALKTGAGVVTVATWPDYAKSALPLIPEAMIWGV
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCCCHHHHCCC
KTAGELTPLLAKATVCVIGPGLGDSDWAKTLFLTAITTQLPMIIDASALRLLSQYPQMDD
CCCCHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCCC
NWILTPHPGEAASLLSCTARDVQIDRYHAASAIQKQYGGVVVLKGVGTVIQTAEKNIFVC
CEEECCCCCCHHHHHHHHHCCEEEHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCEEEE
PQGNPGMATAGMGDILSGIIAAFCAQGFTLSDAAKLGVWVHAVAGDKVAEKSGEVGVLAS
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEECCCHHHHCCCCEEEHHH
DLLDEIPSILNCI
HHHHHHHHHHHCC
>Mature Secondary Structure
MNKLENALYRCDQIKACEQQAATLYQKDENALMALAGAEAFSFLQKLYPHVRHIAVFCGA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHEEEEEEEC
GNNAGDGYVLARLAHEQGFSVTVYQCKSIEDLPSAARNAARLALASGVHCQSADEPLDVD
CCCCCCCCEEEEEHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
AELIVDALLGIGLQGAVHGVIANAIHQINASGLPVLSIDIPSGLNADTGLVENICVNATA
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCEE
TITFIGLKTGMYTLDGPDYCGVIHCAHLNLEACTTKLTRFASLLRDSTLPLPLAARKKNS
EEEEEEEECCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCC
HKGDYGHVLVIGGGPGMPGAVSLAAKAALKTGAGVVTVATWPDYAKSALPLIPEAMIWGV
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCCCCHHHHCCC
KTAGELTPLLAKATVCVIGPGLGDSDWAKTLFLTAITTQLPMIIDASALRLLSQYPQMDD
CCCCHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEECHHHHHHHHHCCCCCC
NWILTPHPGEAASLLSCTARDVQIDRYHAASAIQKQYGGVVVLKGVGTVIQTAEKNIFVC
CEEECCCCCCHHHHHHHHHCCEEEHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCEEEE
PQGNPGMATAGMGDILSGIIAAFCAQGFTLSDAAKLGVWVHAVAGDKVAEKSGEVGVLAS
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEECCCHHHHCCCCEEEHHH
DLLDEIPSILNCI
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7511774 [H]