Click here to switch to the map view.

The map label for this gene is 54295414

Identifier: 54295414

GI number: 54295414

Start: 2851233

End: 2851487

Strand: Reverse

Name: 54295414

Synonym: lpl2500

Alternate gene names: NA

Gene position: 2851487-2851233 (Counterclockwise)

Preceding gene: 54295415

Following gene: 54295413

Centisome position: 85.23

GC content: 41.96

Gene sequence:

>255_bases
ATGATTGAGTTAGAGCCAGAACCAGACACAGTCCTGGATCCTAAAGATATCTTGACTGAGGAAATGAAGTTGGAAGGGTC
AGATAATGATATGGATCATAATCAATTCACCCGTGGTGATGAAGTGGATCTAGTCGGTGATGGTGTTCCTGGATATGAAA
CAACAGGACAAGATGGAACAGATGATGAAATTGAAGAGCAAAGAGAAGCTCGCTATACTCCTACCTTGAACCCTAATCCC
AAAAATGTGCCTTGA

Upstream 100 bases:

>100_bases
TTTTTGTACCTTGTAAACTGCTCCTTGCCAAAGTCCCGCTCTTATCTTTATATCCCTGCTACACTTAAATATAGAGAAGA
TTATATTTAAGGGCCGCCAT

Downstream 100 bases:

>100_bases
TCTCCGTAACGAGGTTCAAGGTGTAGTTTATTGTAAATTTTTTGCAAAATTCACCAAGTTGCCAAATGAAACATTCATTT
TAAATTATCATCTGCCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MIELEPEPDTVLDPKDILTEEMKLEGSDNDMDHNQFTRGDEVDLVGDGVPGYETTGQDGTDDEIEEQREARYTPTLNPNP
KNVP

Sequences:

>Translated_84_residues
MIELEPEPDTVLDPKDILTEEMKLEGSDNDMDHNQFTRGDEVDLVGDGVPGYETTGQDGTDDEIEEQREARYTPTLNPNP
KNVP
>Mature_84_residues
MIELEPEPDTVLDPKDILTEEMKLEGSDNDMDHNQFTRGDEVDLVGDGVPGYETTGQDGTDDEIEEQREARYTPTLNPNP
KNVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9418; Mature: 9418

Theoretical pI: Translated: 3.65; Mature: 3.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELEPEPDTVLDPKDILTEEMKLEGSDNDMDHNQFTRGDEVDLVGDGVPGYETTGQDGT
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
DDEIEEQREARYTPTLNPNPKNVP
CHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIELEPEPDTVLDPKDILTEEMKLEGSDNDMDHNQFTRGDEVDLVGDGVPGYETTGQDGT
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
DDEIEEQREARYTPTLNPNPKNVP
CHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA