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The map label for this gene is 54295396

Identifier: 54295396

GI number: 54295396

Start: 2823160

End: 2823843

Strand: Reverse

Name: 54295396

Synonym: lpl2482

Alternate gene names: NA

Gene position: 2823843-2823160 (Counterclockwise)

Preceding gene: 54295402

Following gene: 54295394

Centisome position: 84.4

GC content: 30.12

Gene sequence:

>684_bases
ATGATCCCTGAAAAACTCTTGACTTATACAAAAACAATTTTTGAATACTCCCATAGTACCGTATACATCAAAGATAAGAA
TTTTCATTACCAGTATATGAATAATAGGGGACTCAAACAATTGCAATTACAAGAAAAAGATATTATGGGTATGCCTGATA
AAGCACTTCCCTTTGGGAAATATGCGCATTTTTATAATAGTCATGATTACTCGGCAATGGAAGAAATTATTTACTTTCAA
TTAGATGATTGTATTACTAAAAACGGTGAAAAAATATTTGCCTTGTCTCACAAATTACCGCTTAAAGATGAAGATGGAAA
AACTCATGGTGTCATTGGCTTTACGAAATTTATGAATCTCCATCAACTGATGAGTAACCTTAATTCAAAAAATACCTTTT
TAACACCTAATCTTAAAATCAATGTTAATGTTGATGATTGGCTAAAAACAACGATTAATTTGTCTCGGAGAGAAATGGAA
GTTTTGTATTATTTTTTACAAGGAAAATCGATCAAGCTTATTGCACCATTGCTTCATATTACTGAAAGAACCGTTATTTT
TCATCTTAATAATATAAAAAGCAAATGGGGTTGTTACAATAAAGAAGATGTATATACTAAATCCTTTGAAAAAGGCTTGA
AAAATCTTACAATTATCTGGGATTTGTTAGCGATGCGTTCCTAA

Upstream 100 bases:

>100_bases
AATTAAAATAAGTAGCTCAGGATCTAATAAAAAAATTTGATTTATTTGTGATCTCATGGTATTATTTTTAATCAAAAAAA
GATTGTGTCACAATAGCTTT

Downstream 100 bases:

>100_bases
CAAACCCAGAGTAAAATCAATATATTATAATTCAAAGCCTGAATTGGTTAAATTTTGATACTCTATATCTTCTAAGAAGC
CATTTATTTTTCTTATAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MIPEKLLTYTKTIFEYSHSTVYIKDKNFHYQYMNNRGLKQLQLQEKDIMGMPDKALPFGKYAHFYNSHDYSAMEEIIYFQ
LDDCITKNGEKIFALSHKLPLKDEDGKTHGVIGFTKFMNLHQLMSNLNSKNTFLTPNLKINVNVDDWLKTTINLSRREME
VLYYFLQGKSIKLIAPLLHITERTVIFHLNNIKSKWGCYNKEDVYTKSFEKGLKNLTIIWDLLAMRS

Sequences:

>Translated_227_residues
MIPEKLLTYTKTIFEYSHSTVYIKDKNFHYQYMNNRGLKQLQLQEKDIMGMPDKALPFGKYAHFYNSHDYSAMEEIIYFQ
LDDCITKNGEKIFALSHKLPLKDEDGKTHGVIGFTKFMNLHQLMSNLNSKNTFLTPNLKINVNVDDWLKTTINLSRREME
VLYYFLQGKSIKLIAPLLHITERTVIFHLNNIKSKWGCYNKEDVYTKSFEKGLKNLTIIWDLLAMRS
>Mature_227_residues
MIPEKLLTYTKTIFEYSHSTVYIKDKNFHYQYMNNRGLKQLQLQEKDIMGMPDKALPFGKYAHFYNSHDYSAMEEIIYFQ
LDDCITKNGEKIFALSHKLPLKDEDGKTHGVIGFTKFMNLHQLMSNLNSKNTFLTPNLKINVNVDDWLKTTINLSRREME
VLYYFLQGKSIKLIAPLLHITERTVIFHLNNIKSKWGCYNKEDVYTKSFEKGLKNLTIIWDLLAMRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26765; Mature: 26765

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPEKLLTYTKTIFEYSHSTVYIKDKNFHYQYMNNRGLKQLQLQEKDIMGMPDKALPFGK
CCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCHHHHCCHHHCCCCCCCCCCCCH
YAHFYNSHDYSAMEEIIYFQLDDCITKNGEKIFALSHKLPLKDEDGKTHGVIGFTKFMNL
HHHHCCCCCHHHHHHHHHHEEHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEHHHHHHHH
HQLMSNLNSKNTFLTPNLKINVNVDDWLKTTINLSRREMEVLYYFLQGKSIKLIAPLLHI
HHHHHCCCCCCCEECCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEHHHHHHH
TERTVIFHLNNIKSKWGCYNKEDVYTKSFEKGLKNLTIIWDLLAMRS
HCCEEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIPEKLLTYTKTIFEYSHSTVYIKDKNFHYQYMNNRGLKQLQLQEKDIMGMPDKALPFGK
CCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCHHHHCCHHHCCCCCCCCCCCCH
YAHFYNSHDYSAMEEIIYFQLDDCITKNGEKIFALSHKLPLKDEDGKTHGVIGFTKFMNL
HHHHCCCCCHHHHHHHHHHEEHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEHHHHHHHH
HQLMSNLNSKNTFLTPNLKINVNVDDWLKTTINLSRREMEVLYYFLQGKSIKLIAPLLHI
HHHHHCCCCCCCEECCCCEEEECHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEHHHHHHH
TERTVIFHLNNIKSKWGCYNKEDVYTKSFEKGLKNLTIIWDLLAMRS
HCCEEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA