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The map label for this gene is 54295362

Identifier: 54295362

GI number: 54295362

Start: 2788074

End: 2789693

Strand: Reverse

Name: 54295362

Synonym: lpl2447

Alternate gene names: NA

Gene position: 2789693-2788074 (Counterclockwise)

Preceding gene: 54295364

Following gene: 54295361

Centisome position: 83.38

GC content: 36.11

Gene sequence:

>1620_bases
ATGTCATACCAAAAAATAGAACTCAGTATTTCATTATCATTAGATTCTCCAAAATTAGATGAGTCTGATTTTATATTGCT
CTCAGTTAAGTATCTTGAAAAGTCACTTGGCAAAAAGAAAGAGTTTTCTGGTTTTTTTGAAGACATAGAAAAGCTCTATT
TTAAGCAGAATTACAAGGAAGCAATTGAAAAAATATTGGATTTCTCTAAAAAAAATGAATCCTTGTTAAGTGAACAAGTT
GTCCAGAGGCTGGCAGAGGTCGCTCCCAGATTAAAAAGCAATCCTAAAGACAATGAAAGCAGAAGGCTTTATGAAACCTT
GTATGCAGATCACCTTGAATCAGTCATTAAACAAGAGAGTGATCTTTCCGTATTTAACGAATTGAGAGACAGTTATAATG
CGGTGAAACCTGAGTATGCAGTAACTCATGAGACCGAAATCAAAACTTTGGATGAAGCAAAGCAATTTATTTTATCTTTT
GTCATGCTGAATGATAATGTTGAATTACCTTTAAAAGCACAATCAGAGAGATACCCAAAAAAGGACAGATCCAGAGAAGA
ATTGGGGAATACTCCATCTGCGAATCCAGGTATTATGAAACCTAACTCACCTAATTTTACCGATAATCTGGTGCCTGTCA
GAGATGTGCCCAAAATAGCCATTAATGAGAAAGTGGCGGGTGGGTATTCAAAAACCAAGCCTACTACTCCTTTTGTGGCG
TCGCTGTCTGGCACAACCTACTCACTTATGGTGGTGTTAACAGACTATATTGAAAAGCATAAAACAGATAAAGACATTGA
AAAAAAAGTAAACCAGATTATTAATTTATGGATTTCCAGTTATATCAAAGAAGGTTATCACAGCTACAGTGAGGTTGTGG
ATGTTTTAACAGAGCCCTTTCTTCAATCTATTTTTGATAAAGCAAATATTAAATTAAATTATGGTGTACTTGAAGACACG
CATGCAGAATTTCGTAAAGCTCAGGATTATGTTTTTGGTTTGACAATTCGATCAGCAATGCATCATGAGTTACAAGAGCG
ATTTAAGAATAAAGAAAAACTGCAGGAAGAGGTAAAGAATTTTGAATCTGGGTTAAATAAACTCAACCAGAATGTCGAAA
ATACAGGTCGCCATCGCGAGGTACTGAATAAATTAAACGAGGTATTTCAGGATTGGTCTGCGGGCAAAAAAAGCTATGAT
GCTTTTAAAGGTGAGTCTAATCAACTGATTTATGATATTGAGTCTGAAGAACAGAAAAGTAATCGTGGTCTTGGCTCCAT
GCTGAAGAACCTCGGGAACTATCTTTTACACTTGATTACCCTTCGTTTTTTGAAAGAAGACTATCCAAAACCGTCTAGTC
CGGTCACAATGTTAGTCACTGAATTAAGAGGCACACTTGAGCAAATAGATCATTTTCATAAAACCAGCCTCTCTTTAAAA
AAAGCAACGCAGCCTGACCCTAAAAATACTTCGCCATCTGGTGAGACAACAGATGTTCTGAAATCAGCTGTCGATACTGA
TAAGCATGATAAAAACCAGGAAAGTGAAGTAATAAAGATATTAGACTCTGAGCAACTGGAGGAAGAAAGGCAAGATGACA
AAATAGCTCGTTTACAATAG

Upstream 100 bases:

>100_bases
TGCTGTTTGCTCTTTATGGGTATCATATTTACTTTTATTAAACATTTTGTTATATTTTGTACTATGTGATTTAAAATTTA
ATCAATTTAGCAGATATCCT

Downstream 100 bases:

>100_bases
AGCTGTTGCATAACCCACTCCTTTCATTTTATTGCCACATTGCAAATGATTCTGAAGTGCTCTTATGTAAACTTCACTCC
TCGAAATGTTTGCACTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MSYQKIELSISLSLDSPKLDESDFILLSVKYLEKSLGKKKEFSGFFEDIEKLYFKQNYKEAIEKILDFSKKNESLLSEQV
VQRLAEVAPRLKSNPKDNESRRLYETLYADHLESVIKQESDLSVFNELRDSYNAVKPEYAVTHETEIKTLDEAKQFILSF
VMLNDNVELPLKAQSERYPKKDRSREELGNTPSANPGIMKPNSPNFTDNLVPVRDVPKIAINEKVAGGYSKTKPTTPFVA
SLSGTTYSLMVVLTDYIEKHKTDKDIEKKVNQIINLWISSYIKEGYHSYSEVVDVLTEPFLQSIFDKANIKLNYGVLEDT
HAEFRKAQDYVFGLTIRSAMHHELQERFKNKEKLQEEVKNFESGLNKLNQNVENTGRHREVLNKLNEVFQDWSAGKKSYD
AFKGESNQLIYDIESEEQKSNRGLGSMLKNLGNYLLHLITLRFLKEDYPKPSSPVTMLVTELRGTLEQIDHFHKTSLSLK
KATQPDPKNTSPSGETTDVLKSAVDTDKHDKNQESEVIKILDSEQLEEERQDDKIARLQ

Sequences:

>Translated_539_residues
MSYQKIELSISLSLDSPKLDESDFILLSVKYLEKSLGKKKEFSGFFEDIEKLYFKQNYKEAIEKILDFSKKNESLLSEQV
VQRLAEVAPRLKSNPKDNESRRLYETLYADHLESVIKQESDLSVFNELRDSYNAVKPEYAVTHETEIKTLDEAKQFILSF
VMLNDNVELPLKAQSERYPKKDRSREELGNTPSANPGIMKPNSPNFTDNLVPVRDVPKIAINEKVAGGYSKTKPTTPFVA
SLSGTTYSLMVVLTDYIEKHKTDKDIEKKVNQIINLWISSYIKEGYHSYSEVVDVLTEPFLQSIFDKANIKLNYGVLEDT
HAEFRKAQDYVFGLTIRSAMHHELQERFKNKEKLQEEVKNFESGLNKLNQNVENTGRHREVLNKLNEVFQDWSAGKKSYD
AFKGESNQLIYDIESEEQKSNRGLGSMLKNLGNYLLHLITLRFLKEDYPKPSSPVTMLVTELRGTLEQIDHFHKTSLSLK
KATQPDPKNTSPSGETTDVLKSAVDTDKHDKNQESEVIKILDSEQLEEERQDDKIARLQ
>Mature_538_residues
SYQKIELSISLSLDSPKLDESDFILLSVKYLEKSLGKKKEFSGFFEDIEKLYFKQNYKEAIEKILDFSKKNESLLSEQVV
QRLAEVAPRLKSNPKDNESRRLYETLYADHLESVIKQESDLSVFNELRDSYNAVKPEYAVTHETEIKTLDEAKQFILSFV
MLNDNVELPLKAQSERYPKKDRSREELGNTPSANPGIMKPNSPNFTDNLVPVRDVPKIAINEKVAGGYSKTKPTTPFVAS
LSGTTYSLMVVLTDYIEKHKTDKDIEKKVNQIINLWISSYIKEGYHSYSEVVDVLTEPFLQSIFDKANIKLNYGVLEDTH
AEFRKAQDYVFGLTIRSAMHHELQERFKNKEKLQEEVKNFESGLNKLNQNVENTGRHREVLNKLNEVFQDWSAGKKSYDA
FKGESNQLIYDIESEEQKSNRGLGSMLKNLGNYLLHLITLRFLKEDYPKPSSPVTMLVTELRGTLEQIDHFHKTSLSLKK
ATQPDPKNTSPSGETTDVLKSAVDTDKHDKNQESEVIKILDSEQLEEERQDDKIARLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61989; Mature: 61857

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYQKIELSISLSLDSPKLDESDFILLSVKYLEKSLGKKKEFSGFFEDIEKLYFKQNYKE
CCCEEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AIEKILDFSKKNESLLSEQVVQRLAEVAPRLKSNPKDNESRRLYETLYADHLESVIKQES
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DLSVFNELRDSYNAVKPEYAVTHETEIKTLDEAKQFILSFVMLNDNVELPLKAQSERYPK
HHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC
KDRSREELGNTPSANPGIMKPNSPNFTDNLVPVRDVPKIAINEKVAGGYSKTKPTTPFVA
CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHCCCCCCCCCCCCHHE
SLSGTTYSLMVVLTDYIEKHKTDKDIEKKVNQIINLWISSYIKEGYHSYSEVVDVLTEPF
ECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQSIFDKANIKLNYGVLEDTHAEFRKAQDYVFGLTIRSAMHHELQERFKNKEKLQEEVKN
HHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FESGLNKLNQNVENTGRHREVLNKLNEVFQDWSAGKKSYDAFKGESNQLIYDIESEEQKS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCHHHHH
NRGLGSMLKNLGNYLLHLITLRFLKEDYPKPSSPVTMLVTELRGTLEQIDHFHKTSLSLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KATQPDPKNTSPSGETTDVLKSAVDTDKHDKNQESEVIKILDSEQLEEERQDDKIARLQ
HCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure 
SYQKIELSISLSLDSPKLDESDFILLSVKYLEKSLGKKKEFSGFFEDIEKLYFKQNYKE
CCEEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
AIEKILDFSKKNESLLSEQVVQRLAEVAPRLKSNPKDNESRRLYETLYADHLESVIKQES
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
DLSVFNELRDSYNAVKPEYAVTHETEIKTLDEAKQFILSFVMLNDNVELPLKAQSERYPK
HHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC
KDRSREELGNTPSANPGIMKPNSPNFTDNLVPVRDVPKIAINEKVAGGYSKTKPTTPFVA
CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHCCCCCCCCCCCCHHE
SLSGTTYSLMVVLTDYIEKHKTDKDIEKKVNQIINLWISSYIKEGYHSYSEVVDVLTEPF
ECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQSIFDKANIKLNYGVLEDTHAEFRKAQDYVFGLTIRSAMHHELQERFKNKEKLQEEVKN
HHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FESGLNKLNQNVENTGRHREVLNKLNEVFQDWSAGKKSYDAFKGESNQLIYDIESEEQKS
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCHHHHH
NRGLGSMLKNLGNYLLHLITLRFLKEDYPKPSSPVTMLVTELRGTLEQIDHFHKTSLSLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KATQPDPKNTSPSGETTDVLKSAVDTDKHDKNQESEVIKILDSEQLEEERQDDKIARLQ
HCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA