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The map label for this gene is 54295333

Identifier: 54295333

GI number: 54295333

Start: 2750394

End: 2751047

Strand: Reverse

Name: 54295333

Synonym: lpl2418

Alternate gene names: NA

Gene position: 2751047-2750394 (Counterclockwise)

Preceding gene: 54295334

Following gene: 54295331

Centisome position: 82.23

GC content: 38.53

Gene sequence:

>654_bases
ATGATGCTCGATGTAATTAACTTTAAAGACTATCGTTCTATTTTATGTCTTAATGGTGATTTGCCCGATCCTTCCTTTTT
TCATAAAAGAAAGCTGCCGGTCATTGCTGCTGATGGTGCCGCTAATGTGTTATGTAACCTTGGTGTCTTTCCTGACTTAA
TTACTGGAGATCTGGATTCTATTCAGCCTGCTTTGTTGGAAAACCATTCTTTTCTTCATTTACCAGATCAAGGGAGTACG
GATTATCAAAAGGCCATGCATTATTTACAAACTCATGATTTATTGCCTGCTATCGTTGTAGGGATAAATGGTGGGTATTT
GGATCATATTCTGAATAACATCAACATTTTTATGGATACAAACTGCCTTTTATATTCGCCTCCCCTCAAAGGTTTTGTTG
TCAATGAAAAGTTGAGGGTTAATTTTATTTTACCTGTCCAGACTAAAATCTCGTTAATAGGCATCCCTGAGGTTGTCCTG
TCTTCTGAGGGTTTGAAGTGGGAGCTAAAGCACTCACATCTTTCTTTTCCTGGAAAAAATTCCTGTTTCAATCGAACACA
AACAGCAGAAATTAGTTTGGAGGTTCACCAGGGCGCCGCCCTTGTTTTGATTTATGAAGATGCTATTGAGGATGCCGGAG
TTTCCTCTTTATAA

Upstream 100 bases:

>100_bases
TGGATCATTTATGGAAGCAGCACAAACTCATTTTTTGTAACGAGCTCCAATGTAGTGGGTTTGATAGTGAGTTCTCTGCT
GATTTTATTAAAAAGACGTT

Downstream 100 bases:

>100_bases
GGAATAAGGACTTACTCTCTCCCCAATCTCTTTGTTAAAAAATATTTTTGCCTCGGCCTTGTGGTTTTTCGTAAGTTCTG
TTTATATTCGAGTACTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Thiamin Pyrophosphokinase

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MMLDVINFKDYRSILCLNGDLPDPSFFHKRKLPVIAADGAANVLCNLGVFPDLITGDLDSIQPALLENHSFLHLPDQGST
DYQKAMHYLQTHDLLPAIVVGINGGYLDHILNNINIFMDTNCLLYSPPLKGFVVNEKLRVNFILPVQTKISLIGIPEVVL
SSEGLKWELKHSHLSFPGKNSCFNRTQTAEISLEVHQGAALVLIYEDAIEDAGVSSL

Sequences:

>Translated_217_residues
MMLDVINFKDYRSILCLNGDLPDPSFFHKRKLPVIAADGAANVLCNLGVFPDLITGDLDSIQPALLENHSFLHLPDQGST
DYQKAMHYLQTHDLLPAIVVGINGGYLDHILNNINIFMDTNCLLYSPPLKGFVVNEKLRVNFILPVQTKISLIGIPEVVL
SSEGLKWELKHSHLSFPGKNSCFNRTQTAEISLEVHQGAALVLIYEDAIEDAGVSSL
>Mature_217_residues
MMLDVINFKDYRSILCLNGDLPDPSFFHKRKLPVIAADGAANVLCNLGVFPDLITGDLDSIQPALLENHSFLHLPDQGST
DYQKAMHYLQTHDLLPAIVVGINGGYLDHILNNINIFMDTNCLLYSPPLKGFVVNEKLRVNFILPVQTKISLIGIPEVVL
SSEGLKWELKHSHLSFPGKNSCFNRTQTAEISLEVHQGAALVLIYEDAIEDAGVSSL

Specific function: Unknown

COG id: COG1564

COG function: function code H; Thiamine pyrophosphokinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23979; Mature: 23979

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLDVINFKDYRSILCLNGDLPDPSFFHKRKLPVIAADGAANVLCNLGVFPDLITGDLDS
CEEEEECCCCCCEEEEEECCCCCCCHHHHCCCCEEEECCCCEEEEECCCCCHHHCCCHHH
IQPALLENHSFLHLPDQGSTDYQKAMHYLQTHDLLPAIVVGINGGYLDHILNNINIFMDT
CCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCEEEEEC
NCLLYSPPLKGFVVNEKLRVNFILPVQTKISLIGIPEVVLSSEGLKWELKHSHLSFPGKN
CEEEECCCCCCEEECCEEEEEEEEECCCEEEEEECCHHEECCCCCEEEEECCCCCCCCCC
SCFNRTQTAEISLEVHQGAALVLIYEDAIEDAGVSSL
CCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MMLDVINFKDYRSILCLNGDLPDPSFFHKRKLPVIAADGAANVLCNLGVFPDLITGDLDS
CEEEEECCCCCCEEEEEECCCCCCCHHHHCCCCEEEECCCCEEEEECCCCCHHHCCCHHH
IQPALLENHSFLHLPDQGSTDYQKAMHYLQTHDLLPAIVVGINGGYLDHILNNINIFMDT
CCHHHHCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCEEEEEC
NCLLYSPPLKGFVVNEKLRVNFILPVQTKISLIGIPEVVLSSEGLKWELKHSHLSFPGKN
CEEEECCCCCCEEECCEEEEEEEEECCCEEEEEECCHHEECCCCCEEEEECCCCCCCCCC
SCFNRTQTAEISLEVHQGAALVLIYEDAIEDAGVSSL
CCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA