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The map label for this gene is 54295278

Identifier: 54295278

GI number: 54295278

Start: 2693790

End: 2694329

Strand: Reverse

Name: 54295278

Synonym: lpl2363

Alternate gene names: NA

Gene position: 2694329-2693790 (Counterclockwise)

Preceding gene: 54295279

Following gene: 54295275

Centisome position: 80.53

GC content: 34.63

Gene sequence:

>540_bases
ATGATAAGACATTTTTTTATAGTTTTATTCTTTTTCGTCGGTTTTATGAATCAGGCTTCAGCTCTTCCCTGGTTTGAGAA
TGAGAATGATTTAAGAAATAATAACAAGCTGAGGTATAGGGCTCATGATGAAATCAAAAAAAATCAAATAGATTTTTCTG
GCAGATGGAGCGGGCAATGTGATAGTAATCCGGCTGTGGACCTAACTATCAAGCATACTCGAGAACACATTTCTATTTCC
TATGGATTTATGGAAGAAAAATATATTCCGGGTGAAGTTCGAGCAGAGTCATCCTCTCGCTTATCTTTATCTGAAAGCGG
CAGCACTACAGTGAAATGGAATCAAGATAACACAGCTTTAATTTTTATTAATTATCATTTATTTATCAATGAAAGCGGTA
GTTTGAATGTGTTTTTTAGTAAGGTTTCCATGGCATTGGAGCAAGAGCAACTGGTAGTCAAAGGACAGCATTTTCAAACA
GGAAATACCTTGGATGATATTAAACAAGAAACTATCTCATGTATTTATGACCGTAAATAA

Upstream 100 bases:

>100_bases
TCCTTAAAAAGTAGATTGCAATGATATTATAAATTCGTTTTCTGCGAGACAGAAAAAGTATTATTCTGTACAAACCTGCC
TACTGATAAGGAAGTCAGAA

Downstream 100 bases:

>100_bases
TGACATAAAGTAAATCCCTGTATGATGAGCTTTTTGCTGGTCACATGGGACTTACTTTACTGGTTAGTGAAACGATCTCA
ATTGATTAAAAATTGTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MIRHFFIVLFFFVGFMNQASALPWFENENDLRNNNKLRYRAHDEIKKNQIDFSGRWSGQCDSNPAVDLTIKHTREHISIS
YGFMEEKYIPGEVRAESSSRLSLSESGSTTVKWNQDNTALIFINYHLFINESGSLNVFFSKVSMALEQEQLVVKGQHFQT
GNTLDDIKQETISCIYDRK

Sequences:

>Translated_179_residues
MIRHFFIVLFFFVGFMNQASALPWFENENDLRNNNKLRYRAHDEIKKNQIDFSGRWSGQCDSNPAVDLTIKHTREHISIS
YGFMEEKYIPGEVRAESSSRLSLSESGSTTVKWNQDNTALIFINYHLFINESGSLNVFFSKVSMALEQEQLVVKGQHFQT
GNTLDDIKQETISCIYDRK
>Mature_179_residues
MIRHFFIVLFFFVGFMNQASALPWFENENDLRNNNKLRYRAHDEIKKNQIDFSGRWSGQCDSNPAVDLTIKHTREHISIS
YGFMEEKYIPGEVRAESSSRLSLSESGSTTVKWNQDNTALIFINYHLFINESGSLNVFFSKVSMALEQEQLVVKGQHFQT
GNTLDDIKQETISCIYDRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20786; Mature: 20786

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRHFFIVLFFFVGFMNQASALPWFENENDLRNNNKLRYRAHDEIKKNQIDFSGRWSGQC
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCCCC
DSNPAVDLTIKHTREHISISYGFMEEKYIPGEVRAESSSRLSLSESGSTTVKWNQDNTAL
CCCCCEEEEEEECCCEEEEEECCEECCCCCCCEECCCCCEEEECCCCCEEEEECCCCEEE
IFINYHLFINESGSLNVFFSKVSMALEQEQLVVKGQHFQTGNTLDDIKQETISCIYDRK
EEEEEEEEEECCCCEEEEEEHHHHHHHHCEEEEECCEECCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIRHFFIVLFFFVGFMNQASALPWFENENDLRNNNKLRYRAHDEIKKNQIDFSGRWSGQC
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCCCCC
DSNPAVDLTIKHTREHISISYGFMEEKYIPGEVRAESSSRLSLSESGSTTVKWNQDNTAL
CCCCCEEEEEEECCCEEEEEECCEECCCCCCCEECCCCCEEEECCCCCEEEEECCCCEEE
IFINYHLFINESGSLNVFFSKVSMALEQEQLVVKGQHFQTGNTLDDIKQETISCIYDRK
EEEEEEEEEECCCCEEEEEEHHHHHHHHCEEEEECCEECCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA