Click here to switch to the map view.

The map label for this gene is 54295264

Identifier: 54295264

GI number: 54295264

Start: 2679751

End: 2681094

Strand: Reverse

Name: 54295264

Synonym: lpl2347

Alternate gene names: NA

Gene position: 2681094-2679751 (Counterclockwise)

Preceding gene: 54295265

Following gene: 54295262

Centisome position: 80.14

GC content: 36.98

Gene sequence:

>1344_bases
ATGAAAGAAATTATCGAGTTGTTAGCTACCTTGGATGAATTGCAAAAGCCTTATATTCATCGTGTCAAAACCAGGTTAAG
CGAGCTTTTAAATCTGGATGAAAAAGAAAACGAGCTAATGCGAATTGAGCAATCGACAAGCAGGTCCTGGGAAGAAGGTG
CTACAACCGATTTAAGGATAGGTCCTATAAAATCAAAAAAAAGAATAGAGGAAATAAGAGCTGTACTCATCGCATTGTCT
GGCGCCAACGCAATCAAATATGAGGAGGGGCATAACTTAGAGAATAATGCTGTAGAATTTATTGTTACGGCATGTGATGT
TGAGCAACTGGAAGGGTTTATCCCACTGAATCAGGAAGAAATGCAAAATACTATTCCTGTTATGACGTTTATTCGTATGT
CAATTGCAGGGAATAGGGGGTATGTGCGAGGGATTTCATTCAATTCTGAAAAACTCGATGGAGAGAATTACCTTGGTTCG
TTTAAAGAAGGAGAACTAACAGCGTCGACACAAGAATGGTTTTCCGTTCTTGAATTATTGGATTTATTAAATAGTGAGTC
AGAACTTAATCTTATTCAAATACAGAACGACTTAAAATCTCTTTTGGGGGTGAAGTTTGAAGTTTATTTTCATTCATCCA
GCGAAGAATTCCCCATTGATTTGCGTACAGGAAGCTTGGATCTCAAAGAGACAGGGGTTCAACAACTGCTGAGATCAATG
GATAGCCTCGTTTTGCTTGATTGTTTAAAAACAGAAAACAAAGAACTTGAGGATGGCCAGAAAGTATGCATTATCAAGCA
GGTAAATCCTCAGGAGCTTCACAGGTTTTCACTAAAAAAAGGAAAGAGTACTAATGCAAATGCTGAGATGCTCTCCAATA
TTATCGAACTTTTAAAGCGATCTTTTCCGAATAATCAGGTAATCCAGGATCTGGTTGTCTTTGATGGCAGAGACGGGAGA
AGTATGTCACGACCTTATTTTCATATTAGAACCCAAAACTATTACCAGGAAGGTACCAGTGATTATAAAAGTGCGATGAG
CATTCTCAAAAAACTTCAGGATAAAACATCAAAAAAAATCATTTTTGATTACAGAAATGAGATGGTTGAGATGAAAGATG
AATCAAGGCCTATATACATGAGCAGTATTGAGAATACTATCAGGTCATCTCAATTTATTATTGATGTTGCGGTCAGCTTA
ACAACACAACAGCTACCTGAATTGCAAAATATATGTGCTGAAATAAATCAATCCAGGTTAAAACGTCATCGTCATAATCT
CTTCAAGCCGCAAATTGAGGAACAAAAAATCAATGAGCAATGTCGAGTTTTATTCATAGGTTAA

Upstream 100 bases:

>100_bases
TATTTTATGTTATTGTTCAACTTCTTGATCAATAAAATCAGGAAGTTAGATACAAAAACTATTTTGGAATAGTCCTTTTA
CTTTACTTGGAATTTAAAAG

Downstream 100 bases:

>100_bases
AGTCAAATTCAGCATAAGAGGCATAAAATGCTTCTTATGTCGCTACTTTAGCCATCATATTTTGTTGTCTTATCCTGAAA
TATTTTTGTTTAACTGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MKEIIELLATLDELQKPYIHRVKTRLSELLNLDEKENELMRIEQSTSRSWEEGATTDLRIGPIKSKKRIEEIRAVLIALS
GANAIKYEEGHNLENNAVEFIVTACDVEQLEGFIPLNQEEMQNTIPVMTFIRMSIAGNRGYVRGISFNSEKLDGENYLGS
FKEGELTASTQEWFSVLELLDLLNSESELNLIQIQNDLKSLLGVKFEVYFHSSSEEFPIDLRTGSLDLKETGVQQLLRSM
DSLVLLDCLKTENKELEDGQKVCIIKQVNPQELHRFSLKKGKSTNANAEMLSNIIELLKRSFPNNQVIQDLVVFDGRDGR
SMSRPYFHIRTQNYYQEGTSDYKSAMSILKKLQDKTSKKIIFDYRNEMVEMKDESRPIYMSSIENTIRSSQFIIDVAVSL
TTQQLPELQNICAEINQSRLKRHRHNLFKPQIEEQKINEQCRVLFIG

Sequences:

>Translated_447_residues
MKEIIELLATLDELQKPYIHRVKTRLSELLNLDEKENELMRIEQSTSRSWEEGATTDLRIGPIKSKKRIEEIRAVLIALS
GANAIKYEEGHNLENNAVEFIVTACDVEQLEGFIPLNQEEMQNTIPVMTFIRMSIAGNRGYVRGISFNSEKLDGENYLGS
FKEGELTASTQEWFSVLELLDLLNSESELNLIQIQNDLKSLLGVKFEVYFHSSSEEFPIDLRTGSLDLKETGVQQLLRSM
DSLVLLDCLKTENKELEDGQKVCIIKQVNPQELHRFSLKKGKSTNANAEMLSNIIELLKRSFPNNQVIQDLVVFDGRDGR
SMSRPYFHIRTQNYYQEGTSDYKSAMSILKKLQDKTSKKIIFDYRNEMVEMKDESRPIYMSSIENTIRSSQFIIDVAVSL
TTQQLPELQNICAEINQSRLKRHRHNLFKPQIEEQKINEQCRVLFIG
>Mature_447_residues
MKEIIELLATLDELQKPYIHRVKTRLSELLNLDEKENELMRIEQSTSRSWEEGATTDLRIGPIKSKKRIEEIRAVLIALS
GANAIKYEEGHNLENNAVEFIVTACDVEQLEGFIPLNQEEMQNTIPVMTFIRMSIAGNRGYVRGISFNSEKLDGENYLGS
FKEGELTASTQEWFSVLELLDLLNSESELNLIQIQNDLKSLLGVKFEVYFHSSSEEFPIDLRTGSLDLKETGVQQLLRSM
DSLVLLDCLKTENKELEDGQKVCIIKQVNPQELHRFSLKKGKSTNANAEMLSNIIELLKRSFPNNQVIQDLVVFDGRDGR
SMSRPYFHIRTQNYYQEGTSDYKSAMSILKKLQDKTSKKIIFDYRNEMVEMKDESRPIYMSSIENTIRSSQFIIDVAVSL
TTQQLPELQNICAEINQSRLKRHRHNLFKPQIEEQKINEQCRVLFIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51515; Mature: 51515

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIIELLATLDELQKPYIHRVKTRLSELLNLDEKENELMRIEQSTSRSWEEGATTDLRI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEE
GPIKSKKRIEEIRAVLIALSGANAIKYEEGHNLENNAVEFIVTACDVEQLEGFIPLNQEE
CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEECCCHHHHCCCCCCCHHH
MQNTIPVMTFIRMSIAGNRGYVRGISFNSEKLDGENYLGSFKEGELTASTQEWFSVLELL
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHH
DLLNSESELNLIQIQNDLKSLLGVKFEVYFHSSSEEFPIDLRTGSLDLKETGVQQLLRSM
HHHCCCCCCCCEEHHHHHHHHHCCEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHH
DSLVLLDCLKTENKELEDGQKVCIIKQVNPQELHRFSLKKGKSTNANAEMLSNIIELLKR
HHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
SFPNNQVIQDLVVFDGRDGRSMSRPYFHIRTQNYYQEGTSDYKSAMSILKKLQDKTSKKI
CCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHCCEE
IFDYRNEMVEMKDESRPIYMSSIENTIRSSQFIIDVAVSLTTQQLPELQNICAEINQSRL
EHHHHHHHHHHCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRHRHNLFKPQIEEQKINEQCRVLFIG
HHHHHHCCCCCHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MKEIIELLATLDELQKPYIHRVKTRLSELLNLDEKENELMRIEQSTSRSWEEGATTDLRI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEE
GPIKSKKRIEEIRAVLIALSGANAIKYEEGHNLENNAVEFIVTACDVEQLEGFIPLNQEE
CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEECCCHHHHCCCCCCCHHH
MQNTIPVMTFIRMSIAGNRGYVRGISFNSEKLDGENYLGSFKEGELTASTQEWFSVLELL
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHH
DLLNSESELNLIQIQNDLKSLLGVKFEVYFHSSSEEFPIDLRTGSLDLKETGVQQLLRSM
HHHCCCCCCCCEEHHHHHHHHHCCEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHH
DSLVLLDCLKTENKELEDGQKVCIIKQVNPQELHRFSLKKGKSTNANAEMLSNIIELLKR
HHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
SFPNNQVIQDLVVFDGRDGRSMSRPYFHIRTQNYYQEGTSDYKSAMSILKKLQDKTSKKI
CCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHCCEE
IFDYRNEMVEMKDESRPIYMSSIENTIRSSQFIIDVAVSLTTQQLPELQNICAEINQSRL
EHHHHHHHHHHCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRHRHNLFKPQIEEQKINEQCRVLFIG
HHHHHHCCCCCHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA