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The map label for this gene is ybeC [H]

Identifier: 54295229

GI number: 54295229

Start: 2633093

End: 2634700

Strand: Reverse

Name: ybeC [H]

Synonym: lpl2312

Alternate gene names: 54295229

Gene position: 2634700-2633093 (Counterclockwise)

Preceding gene: 54295231

Following gene: 54295228

Centisome position: 78.75

GC content: 41.42

Gene sequence:

>1608_bases
ATGAATAAAAATTTAAGTGCTTTGAGTTTACTTTGGATTTCAATTACCAGCATGGTAGGCTCAGGCTGGTTATTTGGTTC
TTTATATTCTGCTCATTTTGCTGGTCCTGCTGCCATTATCGCTTGGCCACTGGCAGGTTTTTTACTTCTGTTTGTTGCCT
TGTCTTACGCTGAGTTAGGTACGATGTTTCCACAGTCTGACAGCCTGGCTTGCTTGCCTTTATATACCCATGGACGTTTG
ACTGGCATTATCATGAATGTCATGACCTGGTTTTCCCTGGCCATTTTGCCAGTAATTGAAACGCAAGGTGTCATTCAATA
TGCCAGTAATTACATTCCAGATCTGGTATCCCATGACGCTTTGCACTATCGAAATACGCCAGCAGGTTATATGCTGTCCC
TGGTTGTATTAATGAGTTTTGTTTTGTTTAATTATTTTGGTATTGGTTTGTTTGCCCGCATTAATGCCGCATTTACTATC
TGGAAGATAATAATCCCTATTCTTACTATCGCAAGCTTGTTAACCATGAGTTATCACCCGGGTAATTTTTTTCAGCACGG
TGGTTTTATGCCTTATGGCTGGCAGGGCGTTATGGCAGCAATGTCAAGTGGAGGCGTGCTTTTTTCACTTTTAGGGTTTC
GACAAGTGGTTATCATGATGGGTGAATTGGAGAAACCAGGACAATACATACCCCTGATTTTGGGTGGTTCACTAATGTTC
GTGACGTTACTTTACACTGGTTTACAATGGTCCTTTATTGGGAGTGTTAGCGAACAAGCGCTGGAAAAAGGTTGGGTGAA
TTTGTCTTTTACTGGTGATGCAGGACCATTTGCCGCTCTCGCTGCACTGGCCGGCATGCTTTGGTTGAGCATTTTATTGT
ACGCCGATGCTTTTATATCACCTTATTCCACTGGTCTTGTTTATTCAACCACAGCAGCTCACATGCTAAGCAGTATGGGC
TCAGTTGTTCCTGCACCTGTAATTCTTACCAAACAAAACAGGTATCAAGTTCCCTGGGTTAGTTTAGGCGTAAATTTCTT
ACTCGCTGCCACCATGTCGCTCGTGTTGCACGGATGGCAAGAAATGTCGGCTTTTCTTGTCGCAATATTAATGATTAGCT
ATTCCATAGGGCCTGTAGCACTGGTTTGCTTACGTCAGCAATTACCGAACTATAAGCGTCCTTTTCGTTTGCAGGGGAGT
AACCTTATTGGCTTTCTCGGATTTTATGTTTGTACAGTCGGTGTTTATTGGGCAGGTTTCCATAGCGTACGAAAGTTATT
GGCGATCACTATTCTGGGATTAGTGTGTTCTTTCCTCTATTGCCTTATAAAAAATACACATCGGGAGATTGATAGCAAAC
AAGCATTATGGTTTATATTCTATCTTTTTGGACTTGGTATTTTCTCATTTCTTGGTAATTATGGTGGTAAGCATATCCTT
CCCCAGTATTGGGATTTGTTGTATTTATTAGTTTTCAGTTTGCTTGTATTTGGTTTTGCCCTATTGTCCAGAAAGCCCAG
TGTCCACACTCAAAACATGGTTGCCCAAAATACACACACTAATATAACTGCTCCTGCTTTCTCAATTGAGCGATATGATA
TTGTTTGA

Upstream 100 bases:

>100_bases
CATGATATTTCTGTTTACAATGCAAAAATATAATGATTTCGCTCTGCTGACTGGTGAATTGTTTGCCTGCATCAAAATCA
TAAGGACATGTGAAAATCAG

Downstream 100 bases:

>100_bases
TTAGAGTCCTTAATGATCAATGTTATTCAATATTGATCTTGACAAGATCATTGTGGGTCACAATAATGCGATTGGTTTTT
TAAAGTCACTTTGCTGCAAG

Product: hypothetical protein

Products: Proton [Cytoplasm]; 4-aminobutyrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MNKNLSALSLLWISITSMVGSGWLFGSLYSAHFAGPAAIIAWPLAGFLLLFVALSYAELGTMFPQSDSLACLPLYTHGRL
TGIIMNVMTWFSLAILPVIETQGVIQYASNYIPDLVSHDALHYRNTPAGYMLSLVVLMSFVLFNYFGIGLFARINAAFTI
WKIIIPILTIASLLTMSYHPGNFFQHGGFMPYGWQGVMAAMSSGGVLFSLLGFRQVVIMMGELEKPGQYIPLILGGSLMF
VTLLYTGLQWSFIGSVSEQALEKGWVNLSFTGDAGPFAALAALAGMLWLSILLYADAFISPYSTGLVYSTTAAHMLSSMG
SVVPAPVILTKQNRYQVPWVSLGVNFLLAATMSLVLHGWQEMSAFLVAILMISYSIGPVALVCLRQQLPNYKRPFRLQGS
NLIGFLGFYVCTVGVYWAGFHSVRKLLAITILGLVCSFLYCLIKNTHREIDSKQALWFIFYLFGLGIFSFLGNYGGKHIL
PQYWDLLYLLVFSLLVFGFALLSRKPSVHTQNMVAQNTHTNITAPAFSIERYDIV

Sequences:

>Translated_535_residues
MNKNLSALSLLWISITSMVGSGWLFGSLYSAHFAGPAAIIAWPLAGFLLLFVALSYAELGTMFPQSDSLACLPLYTHGRL
TGIIMNVMTWFSLAILPVIETQGVIQYASNYIPDLVSHDALHYRNTPAGYMLSLVVLMSFVLFNYFGIGLFARINAAFTI
WKIIIPILTIASLLTMSYHPGNFFQHGGFMPYGWQGVMAAMSSGGVLFSLLGFRQVVIMMGELEKPGQYIPLILGGSLMF
VTLLYTGLQWSFIGSVSEQALEKGWVNLSFTGDAGPFAALAALAGMLWLSILLYADAFISPYSTGLVYSTTAAHMLSSMG
SVVPAPVILTKQNRYQVPWVSLGVNFLLAATMSLVLHGWQEMSAFLVAILMISYSIGPVALVCLRQQLPNYKRPFRLQGS
NLIGFLGFYVCTVGVYWAGFHSVRKLLAITILGLVCSFLYCLIKNTHREIDSKQALWFIFYLFGLGIFSFLGNYGGKHIL
PQYWDLLYLLVFSLLVFGFALLSRKPSVHTQNMVAQNTHTNITAPAFSIERYDIV
>Mature_535_residues
MNKNLSALSLLWISITSMVGSGWLFGSLYSAHFAGPAAIIAWPLAGFLLLFVALSYAELGTMFPQSDSLACLPLYTHGRL
TGIIMNVMTWFSLAILPVIETQGVIQYASNYIPDLVSHDALHYRNTPAGYMLSLVVLMSFVLFNYFGIGLFARINAAFTI
WKIIIPILTIASLLTMSYHPGNFFQHGGFMPYGWQGVMAAMSSGGVLFSLLGFRQVVIMMGELEKPGQYIPLILGGSLMF
VTLLYTGLQWSFIGSVSEQALEKGWVNLSFTGDAGPFAALAALAGMLWLSILLYADAFISPYSTGLVYSTTAAHMLSSMG
SVVPAPVILTKQNRYQVPWVSLGVNFLLAATMSLVLHGWQEMSAFLVAILMISYSIGPVALVCLRQQLPNYKRPFRLQGS
NLIGFLGFYVCTVGVYWAGFHSVRKLLAITILGLVCSFLYCLIKNTHREIDSKQALWFIFYLFGLGIFSFLGNYGGKHIL
PQYWDLLYLLVFSLLVFGFALLSRKPSVHTQNMVAQNTHTNITAPAFSIERYDIV

Specific function: Uptake of an yet unknown amino-acid with the concomitant import of a proton [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 59046; Mature: 59046

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNLSALSLLWISITSMVGSGWLFGSLYSAHFAGPAAIIAWPLAGFLLLFVALSYAELG
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TMFPQSDSLACLPLYTHGRLTGIIMNVMTWFSLAILPVIETQGVIQYASNYIPDLVSHDA
CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
LHYRNTPAGYMLSLVVLMSFVLFNYFGIGLFARINAAFTIWKIIIPILTIASLLTMSYHP
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GNFFQHGGFMPYGWQGVMAAMSSGGVLFSLLGFRQVVIMMGELEKPGQYIPLILGGSLMF
CCHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHH
VTLLYTGLQWSFIGSVSEQALEKGWVNLSFTGDAGPFAALAALAGMLWLSILLYADAFIS
HHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PYSTGLVYSTTAAHMLSSMGSVVPAPVILTKQNRYQVPWVSLGVNFLLAATMSLVLHGWQ
CCCCCCEEHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EMSAFLVAILMISYSIGPVALVCLRQQLPNYKRPFRLQGSNLIGFLGFYVCTVGVYWAGF
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
HSVRKLLAITILGLVCSFLYCLIKNTHREIDSKQALWFIFYLFGLGIFSFLGNYGGKHIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PQYWDLLYLLVFSLLVFGFALLSRKPSVHTQNMVAQNTHTNITAPAFSIERYDIV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MNKNLSALSLLWISITSMVGSGWLFGSLYSAHFAGPAAIIAWPLAGFLLLFVALSYAELG
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TMFPQSDSLACLPLYTHGRLTGIIMNVMTWFSLAILPVIETQGVIQYASNYIPDLVSHDA
CCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCC
LHYRNTPAGYMLSLVVLMSFVLFNYFGIGLFARINAAFTIWKIIIPILTIASLLTMSYHP
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GNFFQHGGFMPYGWQGVMAAMSSGGVLFSLLGFRQVVIMMGELEKPGQYIPLILGGSLMF
CCHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHH
VTLLYTGLQWSFIGSVSEQALEKGWVNLSFTGDAGPFAALAALAGMLWLSILLYADAFIS
HHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PYSTGLVYSTTAAHMLSSMGSVVPAPVILTKQNRYQVPWVSLGVNFLLAATMSLVLHGWQ
CCCCCCEEHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
EMSAFLVAILMISYSIGPVALVCLRQQLPNYKRPFRLQGSNLIGFLGFYVCTVGVYWAGF
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHH
HSVRKLLAITILGLVCSFLYCLIKNTHREIDSKQALWFIFYLFGLGIFSFLGNYGGKHIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PQYWDLLYLLVFSLLVFGFALLSRKPSVHTQNMVAQNTHTNITAPAFSIERYDIV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; 4-aminobutyrate [Periplasm] [C]

Specific reaction: Proton [Periplasm] + 4-aminobutyrate [Periplasm] = Proton [Cytoplasm] + 4-aminobutyrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 12730183 [H]