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The map label for this gene is 54295162

Identifier: 54295162

GI number: 54295162

Start: 2559369

End: 2561294

Strand: Reverse

Name: 54295162

Synonym: lpl2242

Alternate gene names: NA

Gene position: 2561294-2559369 (Counterclockwise)

Preceding gene: 54295163

Following gene: 54295160

Centisome position: 76.56

GC content: 34.89

Gene sequence:

>1926_bases
ATGCCTAGAGTTTATAATCTTAAAGATATTTATCTGGGTGCCCCTTCTTTTTCAGGGCATGAAGTTTATCTTGATGCGGT
TTATTATCCTTCTGATCCGTCCGAAAAAAATTTCAGGGTTATTTATAAGAAAAACAAGTTTGGTAACGCTAACTTATCTC
GCATGGAAGTGGCTTTTAGTCAGTTAGCCCGATTATTTTTAGATAATGGATTAACTTCCTTTCAAAAAATGGTAGTGAAT
GATGCAAATAAAGTACAGGGATTGATAGTTGAGCATTTAAATTATGTGATTGAAAATAAAGAAGGATTGAAGCAGCCATT
TTATACTTTGAATGCCCCAAGGAATGGATGTGATTATACTGAAAAGCGAGTGACCAGCTCGAATGAGATACCTTTCTATT
TCCTGGATAAGTTGCCTCAAGGTTTTTTTAATCAATTACTGGCAGCAGAAAAAAATAATAAATTGAGCATAGATTATGCC
TCTTTGGCAAGTATATTGGCTACTTCGTACACTTTGGAAGAAGACGATTTGCATAAAGGGAATTTTGGTTTTTATTTGGT
GAAGAAACAGGGAAAACCGCGAGTTGTTTTTTTCAAAATTGATCATGATTTAATGTTTGTAGACAGCATCATGTCATTTA
CAACAAGAAGATTCTGCCATTTGTTTGATGGATGTGATGCTTTTGATATCACAGAAGAAGACTTGTTAAAGTTTCCTAAT
TTAAAATATTCTGCTAATGGTTATTGGCCAACCAAAACCAGCATTTTTTATAAACCATGGGATAATAAAGATTATCGTAC
CTATGCTGAAATTCAGGCTTTTGCGGATTTATCCCATATGGAAGAGTTTAATAAGGCAAAATGGCGGTCTTTTTACAAAC
ATATTTTAATCTCTCAATCTCAAATGGAGGCTACCTTAAAGGCCTGCTTTGATGAGAATAACTCTTCAGACAGGGCGCAT
ATTTCCCTGGTAATTCAGGCGATGTTAGCCAGACAGGCGCGTTTAAAGGCGATGTTATTTTCTCTAAAAGATTTTCGTGA
TTTTATTCTTTCCCAAAATGGAAAAGAGAGAGATTTATTATGTCATGAAATCCTGAATAACTTGCCAGAGGAAGAGAGAA
AATCTTTTGAAAATGAAATTAGACAATCGTTAGATTATAACCATAACCTCTGTTGTTCCGGTCTTTTTGAGGATGGGGAT
ACCCCGCTGCATATAGCAATCAAGTCAGGTGATTATCGTTATGACGAAACGATTGGCATGTATGGGCAATTCATCAACAC
GAAAAACAGCTCAGGAAAAACTCCTTTGGATATCGCTTTACAGATGGCTGGGCAGTCTAAAGTTCATCCTGCGGATGTGC
GTAAAGATTACCGTTTTATCATGAAACATTTATTGGCGAATGGAGCTAATCAGACAAAACAGTTTGAAGAATTCGATAAA
ATTGAAAACATCAGATCCTATCAATTTCATACTCCTTATCTAAACAAAGCCATAAAGGCTAAAACTTATCATGAATTGAA
AGAAGTACTCAGGGACATTGGTGAAGATCATCAATATTGTTTGAAATTCAAAAAGATGTTGGCAGTTGAATGCATTTCTG
AATTTATAAAGGCTAATCAAGATAATCTCAGTTTAAGAGGAATACTGTTAAAATTAAAAAAGGAAGTGGATGGTAAGGGA
ACAAAATCAGAAAATGCGGCTTTAATGTATATACGTCAATTAAGAAGTCGGCTATGGATTGTACGTCAAATCAGAGGACT
TTATGGCTGGTCTACAACCCAAGGCGAAATTGATTATATGATTGATAAAGAGCTGGCGCGTTTGGATACTAAAGATTTAA
AGAGACTTTCATTATTTGATTCCAGAGACAGCAGTACTTTGGATAATGTCTTTTTGGATATATCACTATCAAAGAATAAA
ATCTAA

Upstream 100 bases:

>100_bases
TTGATAAGGTTTGATTCGTTGTGAATTAATTTTGAACATTGTTTTGAATGAAACATTGTGATAAAATTATAGTCTAATTT
GTTAATTTTTCTTCCATTCC

Downstream 100 bases:

>100_bases
GTTCATTCTATTGAGAAAAATACCGATGTTTAGCAATATTATTAAGGCGTAATATACGCCTTAATAAATATATGCAACTA
CCAGATTGATTGTTAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: Substrate Of Dot/Icm Secretion System

Number of amino acids: Translated: 641; Mature: 640

Protein sequence:

>641_residues
MPRVYNLKDIYLGAPSFSGHEVYLDAVYYPSDPSEKNFRVIYKKNKFGNANLSRMEVAFSQLARLFLDNGLTSFQKMVVN
DANKVQGLIVEHLNYVIENKEGLKQPFYTLNAPRNGCDYTEKRVTSSNEIPFYFLDKLPQGFFNQLLAAEKNNKLSIDYA
SLASILATSYTLEEDDLHKGNFGFYLVKKQGKPRVVFFKIDHDLMFVDSIMSFTTRRFCHLFDGCDAFDITEEDLLKFPN
LKYSANGYWPTKTSIFYKPWDNKDYRTYAEIQAFADLSHMEEFNKAKWRSFYKHILISQSQMEATLKACFDENNSSDRAH
ISLVIQAMLARQARLKAMLFSLKDFRDFILSQNGKERDLLCHEILNNLPEEERKSFENEIRQSLDYNHNLCCSGLFEDGD
TPLHIAIKSGDYRYDETIGMYGQFINTKNSSGKTPLDIALQMAGQSKVHPADVRKDYRFIMKHLLANGANQTKQFEEFDK
IENIRSYQFHTPYLNKAIKAKTYHELKEVLRDIGEDHQYCLKFKKMLAVECISEFIKANQDNLSLRGILLKLKKEVDGKG
TKSENAALMYIRQLRSRLWIVRQIRGLYGWSTTQGEIDYMIDKELARLDTKDLKRLSLFDSRDSSTLDNVFLDISLSKNK
I

Sequences:

>Translated_641_residues
MPRVYNLKDIYLGAPSFSGHEVYLDAVYYPSDPSEKNFRVIYKKNKFGNANLSRMEVAFSQLARLFLDNGLTSFQKMVVN
DANKVQGLIVEHLNYVIENKEGLKQPFYTLNAPRNGCDYTEKRVTSSNEIPFYFLDKLPQGFFNQLLAAEKNNKLSIDYA
SLASILATSYTLEEDDLHKGNFGFYLVKKQGKPRVVFFKIDHDLMFVDSIMSFTTRRFCHLFDGCDAFDITEEDLLKFPN
LKYSANGYWPTKTSIFYKPWDNKDYRTYAEIQAFADLSHMEEFNKAKWRSFYKHILISQSQMEATLKACFDENNSSDRAH
ISLVIQAMLARQARLKAMLFSLKDFRDFILSQNGKERDLLCHEILNNLPEEERKSFENEIRQSLDYNHNLCCSGLFEDGD
TPLHIAIKSGDYRYDETIGMYGQFINTKNSSGKTPLDIALQMAGQSKVHPADVRKDYRFIMKHLLANGANQTKQFEEFDK
IENIRSYQFHTPYLNKAIKAKTYHELKEVLRDIGEDHQYCLKFKKMLAVECISEFIKANQDNLSLRGILLKLKKEVDGKG
TKSENAALMYIRQLRSRLWIVRQIRGLYGWSTTQGEIDYMIDKELARLDTKDLKRLSLFDSRDSSTLDNVFLDISLSKNK
I
>Mature_640_residues
PRVYNLKDIYLGAPSFSGHEVYLDAVYYPSDPSEKNFRVIYKKNKFGNANLSRMEVAFSQLARLFLDNGLTSFQKMVVND
ANKVQGLIVEHLNYVIENKEGLKQPFYTLNAPRNGCDYTEKRVTSSNEIPFYFLDKLPQGFFNQLLAAEKNNKLSIDYAS
LASILATSYTLEEDDLHKGNFGFYLVKKQGKPRVVFFKIDHDLMFVDSIMSFTTRRFCHLFDGCDAFDITEEDLLKFPNL
KYSANGYWPTKTSIFYKPWDNKDYRTYAEIQAFADLSHMEEFNKAKWRSFYKHILISQSQMEATLKACFDENNSSDRAHI
SLVIQAMLARQARLKAMLFSLKDFRDFILSQNGKERDLLCHEILNNLPEEERKSFENEIRQSLDYNHNLCCSGLFEDGDT
PLHIAIKSGDYRYDETIGMYGQFINTKNSSGKTPLDIALQMAGQSKVHPADVRKDYRFIMKHLLANGANQTKQFEEFDKI
ENIRSYQFHTPYLNKAIKAKTYHELKEVLRDIGEDHQYCLKFKKMLAVECISEFIKANQDNLSLRGILLKLKKEVDGKGT
KSENAALMYIRQLRSRLWIVRQIRGLYGWSTTQGEIDYMIDKELARLDTKDLKRLSLFDSRDSSTLDNVFLDISLSKNKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74454; Mature: 74323

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRVYNLKDIYLGAPSFSGHEVYLDAVYYPSDPSEKNFRVIYKKNKFGNANLSRMEVAFS
CCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
QLARLFLDNGLTSFQKMVVNDANKVQGLIVEHLNYVIENKEGLKQPFYTLNAPRNGCDYT
HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCCCEEECCCCCCCCHH
EKRVTSSNEIPFYFLDKLPQGFFNQLLAAEKNNKLSIDYASLASILATSYTLEEDDLHKG
HHHCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCC
NFGFYLVKKQGKPRVVFFKIDHDLMFVDSIMSFTTRRFCHLFDGCDAFDITEEDLLKFPN
CCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCC
LKYSANGYWPTKTSIFYKPWDNKDYRTYAEIQAFADLSHMEEFNKAKWRSFYKHILISQS
CEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
QMEATLKACFDENNSSDRAHISLVIQAMLARQARLKAMLFSLKDFRDFILSQNGKERDLL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
CHEILNNLPEEERKSFENEIRQSLDYNHNLCCSGLFEDGDTPLHIAIKSGDYRYDETIGM
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEEECCCCCCHHHHHH
YGQFINTKNSSGKTPLDIALQMAGQSKVHPADVRKDYRFIMKHLLANGANQTKQFEEFDK
HHHHHCCCCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
IENIRSYQFHTPYLNKAIKAKTYHELKEVLRDIGEDHQYCLKFKKMLAVECISEFIKANQ
HHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
DNLSLRGILLKLKKEVDGKGTKSENAALMYIRQLRSRLWIVRQIRGLYGWSTTQGEIDYM
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
IDKELARLDTKDLKRLSLFDSRDSSTLDNVFLDISLSKNKI
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure 
PRVYNLKDIYLGAPSFSGHEVYLDAVYYPSDPSEKNFRVIYKKNKFGNANLSRMEVAFS
CCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
QLARLFLDNGLTSFQKMVVNDANKVQGLIVEHLNYVIENKEGLKQPFYTLNAPRNGCDYT
HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHCCCCEEECCCCCCCCHH
EKRVTSSNEIPFYFLDKLPQGFFNQLLAAEKNNKLSIDYASLASILATSYTLEEDDLHKG
HHHCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCC
NFGFYLVKKQGKPRVVFFKIDHDLMFVDSIMSFTTRRFCHLFDGCDAFDITEEDLLKFPN
CCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCC
LKYSANGYWPTKTSIFYKPWDNKDYRTYAEIQAFADLSHMEEFNKAKWRSFYKHILISQS
CEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
QMEATLKACFDENNSSDRAHISLVIQAMLARQARLKAMLFSLKDFRDFILSQNGKERDLL
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
CHEILNNLPEEERKSFENEIRQSLDYNHNLCCSGLFEDGDTPLHIAIKSGDYRYDETIGM
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCEEEEEECCCCCCHHHHHH
YGQFINTKNSSGKTPLDIALQMAGQSKVHPADVRKDYRFIMKHLLANGANQTKQFEEFDK
HHHHHCCCCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
IENIRSYQFHTPYLNKAIKAKTYHELKEVLRDIGEDHQYCLKFKKMLAVECISEFIKANQ
HHHHHCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
DNLSLRGILLKLKKEVDGKGTKSENAALMYIRQLRSRLWIVRQIRGLYGWSTTQGEIDYM
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
IDKELARLDTKDLKRLSLFDSRDSSTLDNVFLDISLSKNKI
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA