Definition | Legionella pneumophila str. Lens, complete genome. |
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Accession | NC_006369 |
Length | 3,345,687 |
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The map label for this gene is 54295152
Identifier: 54295152
GI number: 54295152
Start: 2550202
End: 2551494
Strand: Reverse
Name: 54295152
Synonym: lpl2232
Alternate gene names: NA
Gene position: 2551494-2550202 (Counterclockwise)
Preceding gene: 54295153
Following gene: 54295150
Centisome position: 76.26
GC content: 42.61
Gene sequence:
>1293_bases ATGTCGCCATCAGAATCAGGAGAGTTGTCAATAATACAGGAGATGTCTCAGCGTATCGTGGAGGCGCAGCGTCAAATCAG GATTCTTGATAGTATTAAATGGGATGAATCAGTAAAACAGGAATTTTTTAAGTTCAAGGGAAAAAAACTTCCTTCTATTG ATAAGGCATATTATGACGGTAAGCCACTGCCTTTTAAAGTCAAAGACAAGCAGGAAGAGTTTCGTATCATTTTGCGTGAT GCACAGAACCAATTAGGGCAATACTCCACAGTAACTCGCCTAATCAGACGTCAATGCGAAGAGTATAGCCGCGCAGCCCA GATGTTATCCTTGCGGGGTACCCCTTCATTTAGCGAAATGGCTATGGAATTGTATGGTAGCCCGGACGATGTGTTTTATG TGGGTGGACCGCGTATGTGTGAAATGGGTTCCCTGCTGTTTGATGTATTAAAGAATCTCCAGGTCCAATTGCAGTCCCAA GCTGATGTCAAGCGTTACACTCCGATACAGGCTCAGGAAATTTTACAGGAGCGATTAGAGAAATTTTTTGACAAGCATCC TGGCCGAGTGAGTGTTATGGTCAGTGATGATATGGTTGCTGATGCTTCTGCTGGAGCTGACAGCATCAAGTTAAGTCAGA ACGCTATGTTTAGCGATAGAGATTTACGCTATTTGGAAGTTCATGAGGGCTGGGTTCATGTGGGAACGACTCTCAATGGA GCCTTGCAACCGAATTGCTTTTTCCTATCTAAAGGTTCTCCTTCCAGCAGCGTGATTCAGGAGGGCTTGGCAGTCATTAC CGAAGTCGTGACATTTTCTTCTTATCCAGGTCGGATGTTGAAAATTACAAACCGGGTGATTGCCCTGGATAAGGTGACTC AAGGGGCAGATTTTATTGATATTTATCGCTATTTCCTGGAGTGCGGATTGTCAGAAGAAGACAGCTATAACCAGTCCGTA CGTATATTTAGAGGCAGCACACCGACAGGTGGTCCATTTACCAAAGATTTATCCTATGCCAAGGGGTTTGTATTAATTTA CAATTACATACGCTTTGCTATAGGGCAGAAAAGAGTCGACACAATCCCATTATTATTTACCGGCAAGCTGGTTTTGGATG ATTTACCTTTGCTAGGTGAATTAAAAGAACGCGAGATTTTAACGGATCCAGTGTATCTTCCACCTCCTTTCCAGGATTTG GCTGCATTAAGCGCATGGATGAGTTTCTCTCTGTATTTGAACCAGTTTGATTTAAATGAAATTCAAAAGAATTTTCGATT TTTGTTGGTTTAA
Upstream 100 bases:
>100_bases CAATATTAGTAATTTTTATGATTTACCTCAACAAACTCAGGATGCGCGGGTGAGTATAGCGCCTCCGGTGGAAGATATCA CAACTTCATAAGGATTCATC
Downstream 100 bases:
>100_bases ACATTAATGAGTTTGCATTTGGCCAAGAGTAAAGGGATAGTCGTGCCTGCAACGGGCATAGGCTCCGCCTATTTTGGCCG GATTTGGGTGATAGGCGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSPSESGELSIIQEMSQRIVEAQRQIRILDSIKWDESVKQEFFKFKGKKLPSIDKAYYDGKPLPFKVKDKQEEFRIILRD AQNQLGQYSTVTRLIRRQCEEYSRAAQMLSLRGTPSFSEMAMELYGSPDDVFYVGGPRMCEMGSLLFDVLKNLQVQLQSQ ADVKRYTPIQAQEILQERLEKFFDKHPGRVSVMVSDDMVADASAGADSIKLSQNAMFSDRDLRYLEVHEGWVHVGTTLNG ALQPNCFFLSKGSPSSSVIQEGLAVITEVVTFSSYPGRMLKITNRVIALDKVTQGADFIDIYRYFLECGLSEEDSYNQSV RIFRGSTPTGGPFTKDLSYAKGFVLIYNYIRFAIGQKRVDTIPLLFTGKLVLDDLPLLGELKEREILTDPVYLPPPFQDL AALSAWMSFSLYLNQFDLNEIQKNFRFLLV
Sequences:
>Translated_430_residues MSPSESGELSIIQEMSQRIVEAQRQIRILDSIKWDESVKQEFFKFKGKKLPSIDKAYYDGKPLPFKVKDKQEEFRIILRD AQNQLGQYSTVTRLIRRQCEEYSRAAQMLSLRGTPSFSEMAMELYGSPDDVFYVGGPRMCEMGSLLFDVLKNLQVQLQSQ ADVKRYTPIQAQEILQERLEKFFDKHPGRVSVMVSDDMVADASAGADSIKLSQNAMFSDRDLRYLEVHEGWVHVGTTLNG ALQPNCFFLSKGSPSSSVIQEGLAVITEVVTFSSYPGRMLKITNRVIALDKVTQGADFIDIYRYFLECGLSEEDSYNQSV RIFRGSTPTGGPFTKDLSYAKGFVLIYNYIRFAIGQKRVDTIPLLFTGKLVLDDLPLLGELKEREILTDPVYLPPPFQDL AALSAWMSFSLYLNQFDLNEIQKNFRFLLV >Mature_429_residues SPSESGELSIIQEMSQRIVEAQRQIRILDSIKWDESVKQEFFKFKGKKLPSIDKAYYDGKPLPFKVKDKQEEFRIILRDA QNQLGQYSTVTRLIRRQCEEYSRAAQMLSLRGTPSFSEMAMELYGSPDDVFYVGGPRMCEMGSLLFDVLKNLQVQLQSQA DVKRYTPIQAQEILQERLEKFFDKHPGRVSVMVSDDMVADASAGADSIKLSQNAMFSDRDLRYLEVHEGWVHVGTTLNGA LQPNCFFLSKGSPSSSVIQEGLAVITEVVTFSSYPGRMLKITNRVIALDKVTQGADFIDIYRYFLECGLSEEDSYNQSVR IFRGSTPTGGPFTKDLSYAKGFVLIYNYIRFAIGQKRVDTIPLLFTGKLVLDDLPLLGELKEREILTDPVYLPPPFQDLA ALSAWMSFSLYLNQFDLNEIQKNFRFLLV
Specific function: Unknown
COG id: COG3930
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48974; Mature: 48843
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSESGELSIIQEMSQRIVEAQRQIRILDSIKWDESVKQEFFKFKGKKLPSIDKAYYDG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHCCC KPLPFKVKDKQEEFRIILRDAQNQLGQYSTVTRLIRRQCEEYSRAAQMLSLRGTPSFSEM CCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AMELYGSPDDVFYVGGPRMCEMGSLLFDVLKNLQVQLQSQADVKRYTPIQAQEILQERLE HHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHH KFFDKHPGRVSVMVSDDMVADASAGADSIKLSQNAMFSDRDLRYLEVHEGWVHVGTTLNG HHHHCCCCEEEEEEECCCEECCCCCCCCEEECCCCCCCCCCCEEEEEECCEEEECCEECC ALQPNCFFLSKGSPSSSVIQEGLAVITEVVTFSSYPGRMLKITNRVIALDKVTQGADFID CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHEEEEHHHCCCCHHHH IYRYFLECGLSEEDSYNQSVRIFRGSTPTGGPFTKDLSYAKGFVLIYNYIRFAIGQKRVD HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC TIPLLFTGKLVLDDLPLLGELKEREILTDPVYLPPPFQDLAALSAWMSFSLYLNQFDLNE EEEEEEECHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH IQKNFRFLLV HHHHCEEECC >Mature Secondary Structure SPSESGELSIIQEMSQRIVEAQRQIRILDSIKWDESVKQEFFKFKGKKLPSIDKAYYDG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHCCC KPLPFKVKDKQEEFRIILRDAQNQLGQYSTVTRLIRRQCEEYSRAAQMLSLRGTPSFSEM CCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AMELYGSPDDVFYVGGPRMCEMGSLLFDVLKNLQVQLQSQADVKRYTPIQAQEILQERLE HHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHH KFFDKHPGRVSVMVSDDMVADASAGADSIKLSQNAMFSDRDLRYLEVHEGWVHVGTTLNG HHHHCCCCEEEEEEECCCEECCCCCCCCEEECCCCCCCCCCCEEEEEECCEEEECCEECC ALQPNCFFLSKGSPSSSVIQEGLAVITEVVTFSSYPGRMLKITNRVIALDKVTQGADFID CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHEEEEHHHCCCCHHHH IYRYFLECGLSEEDSYNQSVRIFRGSTPTGGPFTKDLSYAKGFVLIYNYIRFAIGQKRVD HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC TIPLLFTGKLVLDDLPLLGELKEREILTDPVYLPPPFQDLAALSAWMSFSLYLNQFDLNE EEEEEEECHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH IQKNFRFLLV HHHHCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA