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The map label for this gene is 54295118

Identifier: 54295118

GI number: 54295118

Start: 2512939

End: 2513427

Strand: Reverse

Name: 54295118

Synonym: lpl2198

Alternate gene names: NA

Gene position: 2513427-2512939 (Counterclockwise)

Preceding gene: 54295119

Following gene: 54295113

Centisome position: 75.12

GC content: 37.22

Gene sequence:

>489_bases
ATGATTATCAGATTCTCAAAAGTGTTGCTTGTTGTTGCTGTTTCCTTTTTTTGCTTACTTACTGCATTTGGAAACATCAC
TGATTATTCCGCCAATTTTCCTGCTGTGGTAAAAGTATTAACCATGAGTGATATATTTCCTGATTCCACCATCACCTATC
GAGCAATTACTAGTCCAGTTCTGCATTATGTTGCATTTATTATCATTGTTATCCTGGAATTATTAACCGCCGTATTTTGT
GGAATTGGTGCGTGGAAATTGTTTAGGGCAAGAAATGAAAGTGCTTCTGTTTTTAATCATTCCAAGAACTGGGCTATTGG
AGGTCTTACGTTGGGTTTTGTAACCTGGCAAGTGATTTTTATGTCCATAGGAGGAGAGTGGTTTGGTATGTGGATGTCTC
CCACGCTCAACTCAGCTCTTACCACAGCTTTTCATATCTTCATTACTATTTTAGTCGTTATGATTTATTTGGTGATTAAG
GATGAATAG

Upstream 100 bases:

>100_bases
GAACCTGGCTTGGTGAGAAACGAACATAAGCATCTTCTCCACGAACGTTCTTATCAATTAGGTGATACATATTTTTTAAC
TTGTTTCAAAGGATGAAATG

Downstream 100 bases:

>100_bases
AGAGATTTCAGAGATTAATTTGTAACAGAGTAGCCTCCTATCGGAACGGCTGTTTAGAGAACATTTAAATATGAGTTGAC
TCAGTATTGCCTTAATTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein; Transmembrane Protein

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MIIRFSKVLLVVAVSFFCLLTAFGNITDYSANFPAVVKVLTMSDIFPDSTITYRAITSPVLHYVAFIIIVILELLTAVFC
GIGAWKLFRARNESASVFNHSKNWAIGGLTLGFVTWQVIFMSIGGEWFGMWMSPTLNSALTTAFHIFITILVVMIYLVIK
DE

Sequences:

>Translated_162_residues
MIIRFSKVLLVVAVSFFCLLTAFGNITDYSANFPAVVKVLTMSDIFPDSTITYRAITSPVLHYVAFIIIVILELLTAVFC
GIGAWKLFRARNESASVFNHSKNWAIGGLTLGFVTWQVIFMSIGGEWFGMWMSPTLNSALTTAFHIFITILVVMIYLVIK
DE
>Mature_162_residues
MIIRFSKVLLVVAVSFFCLLTAFGNITDYSANFPAVVKVLTMSDIFPDSTITYRAITSPVLHYVAFIIIVILELLTAVFC
GIGAWKLFRARNESASVFNHSKNWAIGGLTLGFVTWQVIFMSIGGEWFGMWMSPTLNSALTTAFHIFITILVVMIYLVIK
DE

Specific function: Unknown

COG id: COG5472

COG function: function code S; Predicted small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18101; Mature: 18101

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRFSKVLLVVAVSFFCLLTAFGNITDYSANFPAVVKVLTMSDIFPDSTITYRAITSPV
CEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
LHYVAFIIIVILELLTAVFCGIGAWKLFRARNESASVFNHSKNWAIGGLTLGFVTWQVIF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCCCEEHHHHHHHHHHHHHH
MSIGGEWFGMWMSPTLNSALTTAFHIFITILVVMIYLVIKDE
HHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIIRFSKVLLVVAVSFFCLLTAFGNITDYSANFPAVVKVLTMSDIFPDSTITYRAITSPV
CEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
LHYVAFIIIVILELLTAVFCGIGAWKLFRARNESASVFNHSKNWAIGGLTLGFVTWQVIF
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHCCCCCCEEHHHHHHHHHHHHHH
MSIGGEWFGMWMSPTLNSALTTAFHIFITILVVMIYLVIKDE
HHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA