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The map label for this gene is ybeQ [H]

Identifier: 54295067

GI number: 54295067

Start: 2452798

End: 2453919

Strand: Reverse

Name: ybeQ [H]

Synonym: lpl2147

Alternate gene names: 54295067

Gene position: 2453919-2452798 (Counterclockwise)

Preceding gene: 54295069

Following gene: 54295066

Centisome position: 73.35

GC content: 40.55

Gene sequence:

>1122_bases
ATGAAAAAATATATTTTATCTCTTTCTCTACTGACGGTGATTAACTCTTCAGCTATCGCTACGACTCAGGAAGGTGAGGA
GGCCTATAACAAGGGATATTACGAAAAAGCATTTATTTTGTTGTCTCCTGAAGCAGATAAAGGAGATGCCAAGGCTCAAT
ATTTGCTGGGTAAGATGTATTATAATGCCCAAGGTGTAACTTATAATCCGGAAAAAACAGAGCAATTATTACTTGCCTCA
GCGAATCAAGGCAATGTCGATGCCCAGGTATTGTTAGCCGGTTTCTATTGGTACCTTAATACACCAGAGGGCTATAAAAA
GGCGTTTGAATGGTATCAGAAAGCAGCGGATCAAAATAATGCAGATGGTCAATATGGCTTGGGCTATATGTATGATACAG
GAACTGGTGTACCTCAGAATTCCGATACAGCTATGGTATGGTATAAAAAAGCAGCAGAGCAAGGCAACTCTAATGCGGCT
TTAGCTATTGGTTATAATTATGATACCGGTACAGGGGTGAAAAAGGATAAGACTCAGGCTCTTAACTGGTATGCAAAAGC
CGCTGACTTAGGTAATGCCAGCGCACAATATAACCTTGGTTTGATGTATGAGCAAGGGGATGGTGTTCCTAAAGATTTTC
AGAAGGCTGCTGAGTATTTTGAGAAAGCAGCAAATCAGGATCATGCCAAATCGCAATTGGAGTTAGGTTATTTATATGAT
TCAGGAAAATTAGGTAAATCGGATCTGCAAAAGGCTGCTTTTTGGTATCAAAAAAGCGCAGATCTGGGGAATGCCAATGC
GCAATTTAATTTAGCTGATATGTATTTTTACGGTGATGGGGTCGGTAAAAGCCTTGAGCAATCCGTATACTGGATGCAAA
AAGCAGCTGAGCAAGGGTATGGTAAGGCTCAAAATCAATTAGGTATCTATTACAGAGACGGTATTGGTGTTGCTGCTGAT
CCTGTAAAAGCTTATGCCTGGTTTACAGCAGCCAAGAGTAATGGCTTTGAAAAAGCGGCGAGCAATGCCAGTGATCTTGA
GAAATCTATGAACCCAGAGGATCTGAGTAAGGCGAGAACTTTAGGACAACAATATACGGATAATTACAAGGCCAAAAAAT
AA

Upstream 100 bases:

>100_bases
ATATAAAAAAAACAAAATGAAAAGGGATTTTATACATTGTTGAATTTATGTCATATACTTTAAAGCGATAGCTCTTAAAA
ATAAGGTATATATCATGGAC

Downstream 100 bases:

>100_bases
AAGCCTGTTACCTGTTTTCAAGAGCTAGAGATACTGCATTTGTGGGCTATGGGAGTGTGCGAGAGAACTCTCGCATACAC
TCGGATTCGGCAGCCCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKKYILSLSLLTVINSSAIATTQEGEEAYNKGYYEKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLAS
ANQGNVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAA
LAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKDFQKAAEYFEKAANQDHAKSQLELGYLYD
SGKLGKSDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQLGIYYRDGIGVAAD
PVKAYAWFTAAKSNGFEKAASNASDLEKSMNPEDLSKARTLGQQYTDNYKAKK

Sequences:

>Translated_373_residues
MKKYILSLSLLTVINSSAIATTQEGEEAYNKGYYEKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLAS
ANQGNVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAA
LAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKDFQKAAEYFEKAANQDHAKSQLELGYLYD
SGKLGKSDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQLGIYYRDGIGVAAD
PVKAYAWFTAAKSNGFEKAASNASDLEKSMNPEDLSKARTLGQQYTDNYKAKK
>Mature_373_residues
MKKYILSLSLLTVINSSAIATTQEGEEAYNKGYYEKAFILLSPEADKGDAKAQYLLGKMYYNAQGVTYNPEKTEQLLLAS
ANQGNVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAADQNNADGQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAA
LAIGYNYDTGTGVKKDKTQALNWYAKAADLGNASAQYNLGLMYEQGDGVPKDFQKAAEYFEKAANQDHAKSQLELGYLYD
SGKLGKSDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGYGKAQNQLGIYYRDGIGVAAD
PVKAYAWFTAAKSNGFEKAASNASDLEKSMNPEDLSKARTLGQQYTDNYKAKK

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=291, Percent_Identity=31.2714776632302, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI151301150, Length=316, Percent_Identity=26.2658227848101, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI217330658, Length=180, Percent_Identity=31.6666666666667, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI217330656, Length=180, Percent_Identity=31.6666666666667, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI33620759, Length=241, Percent_Identity=28.6307053941909, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI154689719, Length=232, Percent_Identity=30.1724137931034, Blast_Score=73, Evalue=4e-13,
Organism=Escherichia coli, GI87081769, Length=257, Percent_Identity=37.3540856031128, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1786867, Length=122, Percent_Identity=35.2459016393443, Blast_Score=79, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17563256, Length=314, Percent_Identity=29.9363057324841, Blast_Score=105, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6319998, Length=269, Percent_Identity=29.368029739777, Blast_Score=80, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6319410, Length=247, Percent_Identity=27.9352226720648, Blast_Score=73, Evalue=6e-14,
Organism=Drosophila melanogaster, GI21355295, Length=331, Percent_Identity=30.5135951661631, Blast_Score=114, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 41172; Mature: 41172

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYILSLSLLTVINSSAIATTQEGEEAYNKGYYEKAFILLSPEADKGDAKAQYLLGKMY
CCCHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHE
YNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAADQNN
ECCCCCEECCCHHHEEEEEECCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCC
ADGQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA
CCCCCCCEEEEECCCCCCCCCCCEEEEEEHHHHCCCCCEEEEEEECCCCCCCCCCCHHHH
LNWYAKAADLGNASAQYNLGLMYEQGDGVPKDFQKAAEYFEKAANQDHAKSQLELGYLYD
HHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHEEEEEEEC
SGKLGKSDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGY
CCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC
GKAQNQLGIYYRDGIGVAADPVKAYAWFTAAKSNGFEKAASNASDLEKSMNPEDLSKART
CCCCCCCEEEEECCCCCCCCCHHHHHEEEHHCCCCHHHHHCCHHHHHHCCCHHHHHHHHH
LGQQYTDNYKAKK
HHHHHHCCCCCCC
>Mature Secondary Structure
MKKYILSLSLLTVINSSAIATTQEGEEAYNKGYYEKAFILLSPEADKGDAKAQYLLGKMY
CCCHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHE
YNAQGVTYNPEKTEQLLLASANQGNVDAQVLLAGFYWYLNTPEGYKKAFEWYQKAADQNN
ECCCCCEECCCHHHEEEEEECCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCC
ADGQYGLGYMYDTGTGVPQNSDTAMVWYKKAAEQGNSNAALAIGYNYDTGTGVKKDKTQA
CCCCCCCEEEEECCCCCCCCCCCEEEEEEHHHHCCCCCEEEEEEECCCCCCCCCCCHHHH
LNWYAKAADLGNASAQYNLGLMYEQGDGVPKDFQKAAEYFEKAANQDHAKSQLELGYLYD
HHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHEEEEEEEC
SGKLGKSDLQKAAFWYQKSADLGNANAQFNLADMYFYGDGVGKSLEQSVYWMQKAAEQGY
CCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCC
GKAQNQLGIYYRDGIGVAADPVKAYAWFTAAKSNGFEKAASNASDLEKSMNPEDLSKART
CCCCCCCEEEEECCCCCCCCCHHHHHEEEHHCCCCHHHHHCCHHHHHHCCCHHHHHHHHH
LGQQYTDNYKAKK
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]