Click here to switch to the map view.

The map label for this gene is 54295014

Identifier: 54295014

GI number: 54295014

Start: 2375299

End: 2375985

Strand: Reverse

Name: 54295014

Synonym: lpl2094

Alternate gene names: NA

Gene position: 2375985-2375299 (Counterclockwise)

Preceding gene: 54295015

Following gene: 54295011

Centisome position: 71.02

GC content: 42.5

Gene sequence:

>687_bases
ATGAGCAAAACTGAGAGACTCTTTCATCTGTTGCAAATTTTGCGGCGTTACCGTTATCCTCTTAGCGGACAATATCTTGC
CAATGAGCTGGGTGTAAGTACCCGTACCATCTATCGGGACATTGCGGTTTTACAGGCTCAAGGTGCTGATATAGAGGGTG
AACCAGGCTTGGGTTATGTGTTAAAGCCAGGTTTTATGTTACCGCCTTTGATGTTTAATGAAGAGGAAATTGAGGCTCTT
GTTTTAGGCTCCAGATGGGTGGCTAAAAAAACGGATACTCACTTGCAACAGGCTGCGCATAATGCCTTGGCTAAAATCGC
TTCTGTGCTGCCTGCCGATTTACGGCAGCAATTGGAGTTATCCAGTTTATTAATAGGGCCTGGTGAAGTGATTTCAGGAG
AAGATGAATCCCTGGCCTTAGTCAGGAAGGCAATACGAAAAGAACTGAAATTGTTTATTCAATACCATGACTTAAAAGGA
AATGTTTCAACACGTACGATTTGGCCAATTGGACTTGGGTATTTTGATCAAGTAAGAGTTTTGATTGCCTGGTGTGAATT
AAAAAAGGATTTTCGTCATTTTAGAGCCGATAGAATTGTAGATGTTCAAAACCTGGGAGTCTGCTATGCAAAGCGACGCT
CGGTGTTACTTCATGATTGGCGAAAGCAAAATAATATCCCAGGCTGA

Upstream 100 bases:

>100_bases
TGGTGCTTTTTAGAGGCATCTGCTGATGGTTTGAATATTTATAAAAAGATTGGTTTTCGTGAACTGTTTAAAAATCTTTA
TTATGAAGAGCAATGCCAAT

Downstream 100 bases:

>100_bases
TGACAACACGATGTTATTGAGGTGTAACTTGAACAGGTAAAATTTAATGCCGAGAATCAAGTTTTACTTTCTTCCCGGAT
TAAGATAGCTTCTTATGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; DeoR-Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; HTH Domain Family; Transcription Regulator Protein; HTH Type; Regulatory Protein; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; HTH Domain-Containing Protein; DeoR Family Transriptional Regulator; Transcription Repressor; Transcription Regulator Protein DeoR Family; DeoR-Family Protein Transcriptional Regulator; HTH Domain-Containing; Helix-Turn-Helix Domain-Containing Protein; HTH Domain Protein; Transcriptional Regulator-Like; Helix-Turn-Helix Family Protein; Bacterial Regulatory Protein DeoR Family; Protein Containing HTH Domain; Transriptional Regulator DeoR Family; NB-Dependent Receptor; Regulatory Protein Deor; Transcriptional Repressor

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSKTERLFHLLQILRRYRYPLSGQYLANELGVSTRTIYRDIAVLQAQGADIEGEPGLGYVLKPGFMLPPLMFNEEEIEAL
VLGSRWVAKKTDTHLQQAAHNALAKIASVLPADLRQQLELSSLLIGPGEVISGEDESLALVRKAIRKELKLFIQYHDLKG
NVSTRTIWPIGLGYFDQVRVLIAWCELKKDFRHFRADRIVDVQNLGVCYAKRRSVLLHDWRKQNNIPG

Sequences:

>Translated_228_residues
MSKTERLFHLLQILRRYRYPLSGQYLANELGVSTRTIYRDIAVLQAQGADIEGEPGLGYVLKPGFMLPPLMFNEEEIEAL
VLGSRWVAKKTDTHLQQAAHNALAKIASVLPADLRQQLELSSLLIGPGEVISGEDESLALVRKAIRKELKLFIQYHDLKG
NVSTRTIWPIGLGYFDQVRVLIAWCELKKDFRHFRADRIVDVQNLGVCYAKRRSVLLHDWRKQNNIPG
>Mature_227_residues
SKTERLFHLLQILRRYRYPLSGQYLANELGVSTRTIYRDIAVLQAQGADIEGEPGLGYVLKPGFMLPPLMFNEEEIEALV
LGSRWVAKKTDTHLQQAAHNALAKIASVLPADLRQQLELSSLLIGPGEVISGEDESLALVRKAIRKELKLFIQYHDLKGN
VSTRTIWPIGLGYFDQVRVLIAWCELKKDFRHFRADRIVDVQNLGVCYAKRRSVLLHDWRKQNNIPG

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25989; Mature: 25857

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTERLFHLLQILRRYRYPLSGQYLANELGVSTRTIYRDIAVLQAQGADIEGEPGLGYV
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEE
LKPGFMLPPLMFNEEEIEALVLGSRWVAKKTDTHLQQAAHNALAKIASVLPADLRQQLEL
ECCCCCCCCCCCCHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
SSLLIGPGEVISGEDESLALVRKAIRKELKLFIQYHDLKGNVSTRTIWPIGLGYFDQVRV
HHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHH
LIAWCELKKDFRHFRADRIVDVQNLGVCYAKRRSVLLHDWRKQNNIPG
HHHHHHHHHHHHHHHHHCEECHHHCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SKTERLFHLLQILRRYRYPLSGQYLANELGVSTRTIYRDIAVLQAQGADIEGEPGLGYV
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCEE
LKPGFMLPPLMFNEEEIEALVLGSRWVAKKTDTHLQQAAHNALAKIASVLPADLRQQLEL
ECCCCCCCCCCCCHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
SSLLIGPGEVISGEDESLALVRKAIRKELKLFIQYHDLKGNVSTRTIWPIGLGYFDQVRV
HHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHH
LIAWCELKKDFRHFRADRIVDVQNLGVCYAKRRSVLLHDWRKQNNIPG
HHHHHHHHHHHHHHHHHCEECHHHCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA