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The map label for this gene is 54294957

Identifier: 54294957

GI number: 54294957

Start: 2280636

End: 2281013

Strand: Reverse

Name: 54294957

Synonym: lpl2036

Alternate gene names: NA

Gene position: 2281013-2280636 (Counterclockwise)

Preceding gene: 54294959

Following gene: 54294956

Centisome position: 68.18

GC content: 31.75

Gene sequence:

>378_bases
TTGGGTTTTAGCACCAATAAATGCAGAACACTTATAGAGTTATCGTCCAGAATTATTACTGATGAAACCATGTTTTTTAA
TTTAGAAGAAAAAACCAATAATGAAATTGTCAAATTTTTATGTCAATTAAAGGGGATTGGACGATGGTCTGCAGAATATG
TTTTGTTACGTGGACTGGGGAAAATTGACATGTTTCCAGGAGAAGATGTAGGTGCGTCAAAAAAATTACAATTATTGTTA
CATATCCAAACAAAATTGGATAACGAGCAAATTTCAAAAATTACGATAAAATGGTACCCCTATACAGGATTTATTTATTT
TCATTTATTGCTGCAAAAATTAAACAATAAGGGATTGCTGGCTATCGGACCAATCTGA

Upstream 100 bases:

>100_bases
AACGAATTATACAAGTAGTTGAGCAACGTTTATCTTCTCCGTTTGAATCAATTAAAGTTGATATTGATGAGTTATTAGTT
CCATTCTTGAATTAAAAAAA

Downstream 100 bases:

>100_bases
ACTATTAACTGGGGTTGCAATTTCATTTGTGCGCCTGTTTATTTATTTTTATTCTAAAAAAATAGACTATAATTATCATT
ACATTACGTATCAACGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: 3-Methyladenine DNA Glycosylase; DNA-3-Methyladenine Glycosylase II; DNA-3-Methyladenine Glycosylase; DNA Glycosidase

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MGFSTNKCRTLIELSSRIITDETMFFNLEEKTNNEIVKFLCQLKGIGRWSAEYVLLRGLGKIDMFPGEDVGASKKLQLLL
HIQTKLDNEQISKITIKWYPYTGFIYFHLLLQKLNNKGLLAIGPI

Sequences:

>Translated_125_residues
MGFSTNKCRTLIELSSRIITDETMFFNLEEKTNNEIVKFLCQLKGIGRWSAEYVLLRGLGKIDMFPGEDVGASKKLQLLL
HIQTKLDNEQISKITIKWYPYTGFIYFHLLLQKLNNKGLLAIGPI
>Mature_124_residues
GFSTNKCRTLIELSSRIITDETMFFNLEEKTNNEIVKFLCQLKGIGRWSAEYVLLRGLGKIDMFPGEDVGASKKLQLLLH
IQTKLDNEQISKITIKWYPYTGFIYFHLLLQKLNNKGLLAIGPI

Specific function: Unknown

COG id: COG0122

COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14368; Mature: 14237

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS00516 ALKYLBASE_DNA_GLYCOS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFSTNKCRTLIELSSRIITDETMFFNLEEKTNNEIVKFLCQLKGIGRWSAEYVLLRGLG
CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHEEECCC
KIDMFPGEDVGASKKLQLLLHIQTKLDNEQISKITIKWYPYTGFIYFHLLLQKLNNKGLL
CCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCCEE
AIGPI
EECCC
>Mature Secondary Structure 
GFSTNKCRTLIELSSRIITDETMFFNLEEKTNNEIVKFLCQLKGIGRWSAEYVLLRGLG
CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHEEECCC
KIDMFPGEDVGASKKLQLLLHIQTKLDNEQISKITIKWYPYTGFIYFHLLLQKLNNKGLL
CCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCCEE
AIGPI
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA