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The map label for this gene is oruR [H]

Identifier: 54294918

GI number: 54294918

Start: 2237210

End: 2238217

Strand: Reverse

Name: oruR [H]

Synonym: lpl1997

Alternate gene names: 54294918

Gene position: 2238217-2237210 (Counterclockwise)

Preceding gene: 54294919

Following gene: 54294917

Centisome position: 66.9

GC content: 34.72

Gene sequence:

>1008_bases
ATGGATCTGGTTATAGCGGCAAATTATCTTTCTACACTGGAAAAATGTCTTGAACAATTTGGGATTAACCATTTTTTAGA
AAAAATTGGCTTTGATCTGATAAGAGTACATGATCCTGACGCCTACTTAACTCAGGATGAATTTAACCAGGTTATTATGG
AAGCTTATAAATTAAGCAATTGCCCGGAATTAGGTTTGGTTTTTGGTCAAAACTTATCTATAGTCAATCACGGTTTTCTT
GGGTATGCAGCAATGAGCAGTCCTACATTTGGAACTGCTATACAGACTGTGCTCAGTTACCTTAATACACGAACCAATTT
GTTGTCTCTGGAGTTACGCCAGTTTAATAATGAAAACAGTGCTTATATCAAATTATTACCACACACAAAAGAAATGGTTT
TATCACGTTTTATAACTGAATTGGCAGTTGCTCATCTTATTAAAATGAGAAATTTTTTGATTAGTTGTAATGACCCATTG
CTCAAGATTGAGTTAAACTACGATGAACCTCCTTATGCAAAATATTATCAAACAATTTTTCAGACTAAAATTGTTTTTAA
TACAGAGGCTACTCGCGTTTGGTTTAAAGCGGAGGAACTGAATTATCCCATCCATTTTGCTGACGATGTCAGTTATCAGC
TGGCAAAAAGGCAATTGCAAGAACTTGAAAAAAAAATGTCATTAAAAGAGGACATGGCAAGCAAGATCAAATCTATTTTA
ATCAATCAGAATTTAAATCATGCCAGCATGGATGAGATAGCCAGTCGATTATGTATGACTTCTCGTACTCTAAGACGTCA
TTTGCAGAGATTGGATGTGACTTATCAAGAGTTGCTTGATGAGGTAAGAGAACAAAAAGCAAAGACATTTTTGCTCAATA
ATAATATTTCCATGACCGAGATCAGCTTTTTATTGGGTTTTCAAGATACATCCAATTTTTCAAAAGCATTCAAACGATGG
ACAGGAATCACTCCCACAGAATATAGGGAAAAACATGAAGTCCAATGA

Upstream 100 bases:

>100_bases
TAAGCCAACTAAATCTTGAATTTTTTTCACATTATTGGATCTTATACTCTAATCTAGATTAGAATTAATTCACTTCTCTC
TTAAAAAGAAAAGCCTGTTG

Downstream 100 bases:

>100_bases
TTGCTCCATTTTAATTTAAACTCATGGCTTATTGATTCTTGAGTTGATATTTATTCTCCTGCATACTGAGGTGGTTTTAT
TTTTAAAAATTGGTCAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MDLVIAANYLSTLEKCLEQFGINHFLEKIGFDLIRVHDPDAYLTQDEFNQVIMEAYKLSNCPELGLVFGQNLSIVNHGFL
GYAAMSSPTFGTAIQTVLSYLNTRTNLLSLELRQFNNENSAYIKLLPHTKEMVLSRFITELAVAHLIKMRNFLISCNDPL
LKIELNYDEPPYAKYYQTIFQTKIVFNTEATRVWFKAEELNYPIHFADDVSYQLAKRQLQELEKKMSLKEDMASKIKSIL
INQNLNHASMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQKAKTFLLNNNISMTEISFLLGFQDTSNFSKAFKRW
TGITPTEYREKHEVQ

Sequences:

>Translated_335_residues
MDLVIAANYLSTLEKCLEQFGINHFLEKIGFDLIRVHDPDAYLTQDEFNQVIMEAYKLSNCPELGLVFGQNLSIVNHGFL
GYAAMSSPTFGTAIQTVLSYLNTRTNLLSLELRQFNNENSAYIKLLPHTKEMVLSRFITELAVAHLIKMRNFLISCNDPL
LKIELNYDEPPYAKYYQTIFQTKIVFNTEATRVWFKAEELNYPIHFADDVSYQLAKRQLQELEKKMSLKEDMASKIKSIL
INQNLNHASMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQKAKTFLLNNNISMTEISFLLGFQDTSNFSKAFKRW
TGITPTEYREKHEVQ
>Mature_335_residues
MDLVIAANYLSTLEKCLEQFGINHFLEKIGFDLIRVHDPDAYLTQDEFNQVIMEAYKLSNCPELGLVFGQNLSIVNHGFL
GYAAMSSPTFGTAIQTVLSYLNTRTNLLSLELRQFNNENSAYIKLLPHTKEMVLSRFITELAVAHLIKMRNFLISCNDPL
LKIELNYDEPPYAKYYQTIFQTKIVFNTEATRVWFKAEELNYPIHFADDVSYQLAKRQLQELEKKMSLKEDMASKIKSIL
INQNLNHASMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQKAKTFLLNNNISMTEISFLLGFQDTSNFSKAFKRW
TGITPTEYREKHEVQ

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789933, Length=105, Percent_Identity=30.4761904761905, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38954; Mature: 38954

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLVIAANYLSTLEKCLEQFGINHFLEKIGFDLIRVHDPDAYLTQDEFNQVIMEAYKLSN
CCEEEEHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
CPELGLVFGQNLSIVNHGFLGYAAMSSPTFGTAIQTVLSYLNTRTNLLSLELRQFNNENS
CCCHHHHCCCCCCEECCCCHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCC
AYIKLLPHTKEMVLSRFITELAVAHLIKMRNFLISCNDPLLKIELNYDEPPYAKYYQTIF
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCHHHHHHHHH
QTKIVFNTEATRVWFKAEELNYPIHFADDVSYQLAKRQLQELEKKMSLKEDMASKIKSIL
HHHHEEECCHHEEEEEHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INQNLNHASMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQKAKTFLLNNNISMTE
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCHHH
ISFLLGFQDTSNFSKAFKRWTGITPTEYREKHEVQ
HHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCC
>Mature Secondary Structure
MDLVIAANYLSTLEKCLEQFGINHFLEKIGFDLIRVHDPDAYLTQDEFNQVIMEAYKLSN
CCEEEEHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCC
CPELGLVFGQNLSIVNHGFLGYAAMSSPTFGTAIQTVLSYLNTRTNLLSLELRQFNNENS
CCCHHHHCCCCCCEECCCCHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCC
AYIKLLPHTKEMVLSRFITELAVAHLIKMRNFLISCNDPLLKIELNYDEPPYAKYYQTIF
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCHHHHHHHHH
QTKIVFNTEATRVWFKAEELNYPIHFADDVSYQLAKRQLQELEKKMSLKEDMASKIKSIL
HHHHEEECCHHEEEEEHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INQNLNHASMDEIASRLCMTSRTLRRHLQRLDVTYQELLDEVREQKAKTFLLNNNISMTE
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCHHH
ISFLLGFQDTSNFSKAFKRWTGITPTEYREKHEVQ
HHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]