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The map label for this gene is 54294887

Identifier: 54294887

GI number: 54294887

Start: 2208412

End: 2209050

Strand: Reverse

Name: 54294887

Synonym: lpl1966

Alternate gene names: NA

Gene position: 2209050-2208412 (Counterclockwise)

Preceding gene: 54294888

Following gene: 54294883

Centisome position: 66.03

GC content: 32.71

Gene sequence:

>639_bases
ATGTTTGGGGTTTTAGTGGCTTACACAAAGTTTTTTGCTATCAATCCGTATGATAAGAAAAGTATGAGTATTTACCAATC
GGTTAAGAAAGAATTCGAGAAGGATTTAAACCATATCGAGTCCTCTTATAGTGAACTACTCAAAGATAAAGATTTCAATT
CGGCGTTGCAAGTAGAAATGAAAGAACTGGAGATTAGGTTAAAGTATGTCCTTTTTAATTGGTTCTTCTTATTCAAAAAG
GATAAGCAAGATTTGAGCAAGCAAATTTGTCAGTTAAAAGTAGATATATTGAGATTAAAAACAAAATTTATGATAAGCCA
TCTTCTGTTGAATCATGATAAATACAACCTTGAACACTACAAATTTGTGGTTAAGCATTTACATAATCACTTGGAAGATC
TCAATGACAAGATAGGCCTGATTAAAGGTATTGACGTTGATATTTACAACGATCTGTTCAGTGAGATGTATGAATGGTTT
GAGCAAGTATATTCTCTATTAAACAATCGATATGATGAGTTTAAAAAGGAGTTTTCTATAGGCGATAAATGGGATGATTG
GAGCTATGACAATAGTAGTAGCGAGGATGATTGGGACGATAATGAGCCCCTGGTTTTCTTAAACAATACGATTCCTTAA

Upstream 100 bases:

>100_bases
CAATTTGCTAAATAAAATAATTGCTTTAAAGAATCAAATTGAAAAATTAAGTGCCAATCTGGTGTTTGTATTATATTATT
AGGACATTTTTAATTCTTTA

Downstream 100 bases:

>100_bases
TGAATTAATATATCGTGATGCGGTTCAATGAGAATTATTCAGTAGGGTAAGGCTTCTGTAGCAAGCGTAAGTCAATATGT
ATTTGATGAGTATCTATACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MFGVLVAYTKFFAINPYDKKSMSIYQSVKKEFEKDLNHIESSYSELLKDKDFNSALQVEMKELEIRLKYVLFNWFFLFKK
DKQDLSKQICQLKVDILRLKTKFMISHLLLNHDKYNLEHYKFVVKHLHNHLEDLNDKIGLIKGIDVDIYNDLFSEMYEWF
EQVYSLLNNRYDEFKKEFSIGDKWDDWSYDNSSSEDDWDDNEPLVFLNNTIP

Sequences:

>Translated_212_residues
MFGVLVAYTKFFAINPYDKKSMSIYQSVKKEFEKDLNHIESSYSELLKDKDFNSALQVEMKELEIRLKYVLFNWFFLFKK
DKQDLSKQICQLKVDILRLKTKFMISHLLLNHDKYNLEHYKFVVKHLHNHLEDLNDKIGLIKGIDVDIYNDLFSEMYEWF
EQVYSLLNNRYDEFKKEFSIGDKWDDWSYDNSSSEDDWDDNEPLVFLNNTIP
>Mature_212_residues
MFGVLVAYTKFFAINPYDKKSMSIYQSVKKEFEKDLNHIESSYSELLKDKDFNSALQVEMKELEIRLKYVLFNWFFLFKK
DKQDLSKQICQLKVDILRLKTKFMISHLLLNHDKYNLEHYKFVVKHLHNHLEDLNDKIGLIKGIDVDIYNDLFSEMYEWF
EQVYSLLNNRYDEFKKEFSIGDKWDDWSYDNSSSEDDWDDNEPLVFLNNTIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25665; Mature: 25665

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGVLVAYTKFFAINPYDKKSMSIYQSVKKEFEKDLNHIESSYSELLKDKDFNSALQVEM
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KELEIRLKYVLFNWFFLFKKDKQDLSKQICQLKVDILRLKTKFMISHLLLNHDKYNLEHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
KFVVKHLHNHLEDLNDKIGLIKGIDVDIYNDLFSEMYEWFEQVYSLLNNRYDEFKKEFSI
HHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDKWDDWSYDNSSSEDDWDDNEPLVFLNNTIP
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
>Mature Secondary Structure
MFGVLVAYTKFFAINPYDKKSMSIYQSVKKEFEKDLNHIESSYSELLKDKDFNSALQVEM
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KELEIRLKYVLFNWFFLFKKDKQDLSKQICQLKVDILRLKTKFMISHLLLNHDKYNLEHY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
KFVVKHLHNHLEDLNDKIGLIKGIDVDIYNDLFSEMYEWFEQVYSLLNNRYDEFKKEFSI
HHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDKWDDWSYDNSSSEDDWDDNEPLVFLNNTIP
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA