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The map label for this gene is 54294882

Identifier: 54294882

GI number: 54294882

Start: 2202418

End: 2205234

Strand: Reverse

Name: 54294882

Synonym: lpl1961

Alternate gene names: NA

Gene position: 2205234-2202418 (Counterclockwise)

Preceding gene: 54294883

Following gene: 54294881

Centisome position: 65.91

GC content: 38.73

Gene sequence:

>2817_bases
ATGGGCAAGACAACAACTCCAGAAATTAATCAATTGAATAAATATATTATTGATAAAAAAAGCATTAAATTAGCCAATGA
TTTATGGATAAGAAGCGTACCTTTAAAAGATACCCCTGCTGAAAAGTATATCGTAGGAACTCGAAAAATCCCGATAGACG
TGGCCGAAAAATTACAGATACGAAGCTTAAAAGGCCCTATTGGTATTCCAGAGTTTGATAAAAACAAACCTTATAATGAT
TATGTGGTTGTCCCTGTTTATAATCTGGATGATGAACTCGTTGGTCTGCAGATAATACAAATTGACCCTGCTGGTAACAA
AGCGACAAATCCTAAAAATTCAGATTTTTTTTGCAAGAAATATTTAGGACCGACTAAACCTCTGCGAGAAGGTAAAGCAG
CTGTTATTAATAAAACAGATAATGTCAATGTTGTTTTTATTGCCGAAGGAGTTGAAACAGCGGCAAGTGTGGCTAGTTTG
AATGAGGTCAGAAATAACTATTCTGTGTTAGCATCAATGGGCGTATCTGAACTGCCTGCTACCTTGGCCTATGTCAAAAC
TCACTACCCCCCAGGAGCAACGGTTGTTTTACTAAAAGATCATGACGATCCTGTGGAGAATCCTTTCGCTAACTCAGAAT
TTGACAAGGCTAAGAAAGCATTCGTTGATGCCGGTTATCGCGTTATTGTCAAAGAACCTCCAACTGTCAAGGAGGATTGG
AATGACGTTTTAGCCAAAGGGGGAGTAAACGAATTGGAGCGCCAGCTCAATCTTAATAACCCGATTCTATGTTTACCGGA
TACTCCTGCCAGAAATAGCAAGGTAACACCTCATTTCAAATCCTTATATGCTGATCTTTTAAAGAATGAAAAATTGGCAG
AAGAGCAAGTTGTTTGTGGTCTCTTGGATAAAGTAATTGGGCAATTGATTGATAAATTGAAGAAAACTCAATCAAGTGAT
GATTTGCACACGACCATTAAAGAGATTGATGAAGTAATTAGAACTACAGAAGGAGTTCGTACACTTTTATCTGAAAATAA
GATATCTGAAACTAAGAACATCCCGCGTCAATTAAAAGGGCTTCGGAGAGCACTAAAAGAACTCAAATTACTTGAGGACA
GACGTCGCGATAGTTTACGGGAAAATGATGATATTGATTTCTCGGCCGATCCGCAAACCAATAGTAATGGCGATTTATAT
AAGGCCTACTATTTTGTCATGAGTCGTTGTCTTGAACACCTTGGATCTTTAGGGCCTCATGGTATTTTTGATTTGGAAAA
GCAAAGCCAAATTTTAGGGCTTTATCAGAAAAGGCTGAAGGCTATTGATAATGAAATCAAAAGAATTCCACAGTTAATTG
CTGAATTTAGCGGTGATGACGAAATCGTAGGCGAAATCGTAATTAAGCAACTGAAAAATAAACTAAAAAGTTTGAAACTG
GAAAGAGAACTCTACGCGCAGGAATTTCATGAAATGAAACAACAACTGCGTCTCCTGAGAAGCGCATATCCGAAAGGCAA
TACTCCTTATGCAAACTACTATGAACAGTTTGTCGAAGAGGCGAACTCTACCATGATGAAAGGCAAGACCCAAGCAAAGG
CTATCAGGGAGAAGCTAACAGGTGTATGGGCTAACAAAAAGCAGGAGTTACAAGAGTACTATAAAAAACGAATTGAAGCA
GCCAGGCAGAATTTTGTCTACGAAAGAAAAAAGGCAATTCCACCCTTGATTGAATATCTGGAAGGATTAAGAGCGATTGT
GAAAAAGAGAAGTGAGGAAATAGACAAAAAAGCCCTGCTTCCCGAATCTCGTAATTATCAAGTGCAATATTTACAAGCTA
TGGAAGAATTGAGTCAATCTGAAGGAGTGGATAAAATATTACAAGACTGGTTGAATAATCTTGAAAATTTCAAGACTGTA
TCTCCATTGATTTATTATCCTCCTAAAGAGGGTGAAACAGTCGATGTGGTCGAGTTGATTGACTATGATTCCGATGGAGA
AGAAACCTTAGATGAATTGTGCAAGGAAATCTTTGTCGATAAGGAGCGTTTATTGGAAACGCCAATGAATGTTCATGACA
AAGGAAAGAAAAAACGGGAAGGAAAAGCAGGTGATTCTGATCCGCAGGTTATGAGTGGTCCAAGTGGCCTTGCTGAGGGT
TTGATGCAATCTATTCAACCTGCTAGCCTGAAAACCAGCAATCCGCTGCTGTATTCGACTATCAAGGATTTTTCCGAGCG
GTTGGCAGTGAGACTTTACAAATCCTTTGAGGTTATTTCTCCAACAAGTGGTGAAAGACAGGAGTTTGATGGTCTTGCTT
TACGTAAAAAAGGACTAAGCATTATTGAGCGTAAAACAAATGATGGAACAGGTCCAGGGCTTTTTCAACGCAATTTTTGT
CAGCAAAAAATTGCCTCCAAGCATGATTTTGTCTTGAAAAATGTTATTGCGGAATTAAAAACCCAAACTTCTCCTGAACA
ATTTATTGATATAAAAGAGCCAAAACCTTTGGGTTGGTACAGTGAGGATTTTACTCCGGAAATGCAAGAGCGATTGGTTA
ATGCTGCCAAATCAACGGTTATTAAAGCATTGCAGAACTTGACTATTGAGTTCAATGTCAATAAACCTAAAGCCTACTCA
GCGACAGATTACCGCGGATTGTTCTTTAATCGCGGTTTAATTCCGGGTGGCGTTTCGCTGCGTTTTTCCAGCCTTGGCAA
AGGAAATGAAGAGGTAGCTCATCAGCATATGGACAAAATTTCAGAAGAAAGAACAGCTAAGCGAGAAAGCAGGGTTTTTT
CTATGAGAGTCAAATAA

Upstream 100 bases:

>100_bases
GCAAGACAACAACTCCAGAAATTAATCATGTGTTGTTTTTTAATATTTCCTTAAGCTAAATATGCCAAAATTTTCACTTC
ATTTAAGTGAGGTAATCGGT

Downstream 100 bases:

>100_bases
AAACTCATTGCTTCAATAACTCAAGTTGTTAATCCTACAAAAGAGCTCTCTCTTACCCAAGTGGAAAAGAAAGAGCTCTT
TTTACTATGATATTTTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 938; Mature: 937

Protein sequence:

>938_residues
MGKTTTPEINQLNKYIIDKKSIKLANDLWIRSVPLKDTPAEKYIVGTRKIPIDVAEKLQIRSLKGPIGIPEFDKNKPYND
YVVVPVYNLDDELVGLQIIQIDPAGNKATNPKNSDFFCKKYLGPTKPLREGKAAVINKTDNVNVVFIAEGVETAASVASL
NEVRNNYSVLASMGVSELPATLAYVKTHYPPGATVVLLKDHDDPVENPFANSEFDKAKKAFVDAGYRVIVKEPPTVKEDW
NDVLAKGGVNELERQLNLNNPILCLPDTPARNSKVTPHFKSLYADLLKNEKLAEEQVVCGLLDKVIGQLIDKLKKTQSSD
DLHTTIKEIDEVIRTTEGVRTLLSENKISETKNIPRQLKGLRRALKELKLLEDRRRDSLRENDDIDFSADPQTNSNGDLY
KAYYFVMSRCLEHLGSLGPHGIFDLEKQSQILGLYQKRLKAIDNEIKRIPQLIAEFSGDDEIVGEIVIKQLKNKLKSLKL
ERELYAQEFHEMKQQLRLLRSAYPKGNTPYANYYEQFVEEANSTMMKGKTQAKAIREKLTGVWANKKQELQEYYKKRIEA
ARQNFVYERKKAIPPLIEYLEGLRAIVKKRSEEIDKKALLPESRNYQVQYLQAMEELSQSEGVDKILQDWLNNLENFKTV
SPLIYYPPKEGETVDVVELIDYDSDGEETLDELCKEIFVDKERLLETPMNVHDKGKKKREGKAGDSDPQVMSGPSGLAEG
LMQSIQPASLKTSNPLLYSTIKDFSERLAVRLYKSFEVISPTSGERQEFDGLALRKKGLSIIERKTNDGTGPGLFQRNFC
QQKIASKHDFVLKNVIAELKTQTSPEQFIDIKEPKPLGWYSEDFTPEMQERLVNAAKSTVIKALQNLTIEFNVNKPKAYS
ATDYRGLFFNRGLIPGGVSLRFSSLGKGNEEVAHQHMDKISEERTAKRESRVFSMRVK

Sequences:

>Translated_938_residues
MGKTTTPEINQLNKYIIDKKSIKLANDLWIRSVPLKDTPAEKYIVGTRKIPIDVAEKLQIRSLKGPIGIPEFDKNKPYND
YVVVPVYNLDDELVGLQIIQIDPAGNKATNPKNSDFFCKKYLGPTKPLREGKAAVINKTDNVNVVFIAEGVETAASVASL
NEVRNNYSVLASMGVSELPATLAYVKTHYPPGATVVLLKDHDDPVENPFANSEFDKAKKAFVDAGYRVIVKEPPTVKEDW
NDVLAKGGVNELERQLNLNNPILCLPDTPARNSKVTPHFKSLYADLLKNEKLAEEQVVCGLLDKVIGQLIDKLKKTQSSD
DLHTTIKEIDEVIRTTEGVRTLLSENKISETKNIPRQLKGLRRALKELKLLEDRRRDSLRENDDIDFSADPQTNSNGDLY
KAYYFVMSRCLEHLGSLGPHGIFDLEKQSQILGLYQKRLKAIDNEIKRIPQLIAEFSGDDEIVGEIVIKQLKNKLKSLKL
ERELYAQEFHEMKQQLRLLRSAYPKGNTPYANYYEQFVEEANSTMMKGKTQAKAIREKLTGVWANKKQELQEYYKKRIEA
ARQNFVYERKKAIPPLIEYLEGLRAIVKKRSEEIDKKALLPESRNYQVQYLQAMEELSQSEGVDKILQDWLNNLENFKTV
SPLIYYPPKEGETVDVVELIDYDSDGEETLDELCKEIFVDKERLLETPMNVHDKGKKKREGKAGDSDPQVMSGPSGLAEG
LMQSIQPASLKTSNPLLYSTIKDFSERLAVRLYKSFEVISPTSGERQEFDGLALRKKGLSIIERKTNDGTGPGLFQRNFC
QQKIASKHDFVLKNVIAELKTQTSPEQFIDIKEPKPLGWYSEDFTPEMQERLVNAAKSTVIKALQNLTIEFNVNKPKAYS
ATDYRGLFFNRGLIPGGVSLRFSSLGKGNEEVAHQHMDKISEERTAKRESRVFSMRVK
>Mature_937_residues
GKTTTPEINQLNKYIIDKKSIKLANDLWIRSVPLKDTPAEKYIVGTRKIPIDVAEKLQIRSLKGPIGIPEFDKNKPYNDY
VVVPVYNLDDELVGLQIIQIDPAGNKATNPKNSDFFCKKYLGPTKPLREGKAAVINKTDNVNVVFIAEGVETAASVASLN
EVRNNYSVLASMGVSELPATLAYVKTHYPPGATVVLLKDHDDPVENPFANSEFDKAKKAFVDAGYRVIVKEPPTVKEDWN
DVLAKGGVNELERQLNLNNPILCLPDTPARNSKVTPHFKSLYADLLKNEKLAEEQVVCGLLDKVIGQLIDKLKKTQSSDD
LHTTIKEIDEVIRTTEGVRTLLSENKISETKNIPRQLKGLRRALKELKLLEDRRRDSLRENDDIDFSADPQTNSNGDLYK
AYYFVMSRCLEHLGSLGPHGIFDLEKQSQILGLYQKRLKAIDNEIKRIPQLIAEFSGDDEIVGEIVIKQLKNKLKSLKLE
RELYAQEFHEMKQQLRLLRSAYPKGNTPYANYYEQFVEEANSTMMKGKTQAKAIREKLTGVWANKKQELQEYYKKRIEAA
RQNFVYERKKAIPPLIEYLEGLRAIVKKRSEEIDKKALLPESRNYQVQYLQAMEELSQSEGVDKILQDWLNNLENFKTVS
PLIYYPPKEGETVDVVELIDYDSDGEETLDELCKEIFVDKERLLETPMNVHDKGKKKREGKAGDSDPQVMSGPSGLAEGL
MQSIQPASLKTSNPLLYSTIKDFSERLAVRLYKSFEVISPTSGERQEFDGLALRKKGLSIIERKTNDGTGPGLFQRNFCQ
QKIASKHDFVLKNVIAELKTQTSPEQFIDIKEPKPLGWYSEDFTPEMQERLVNAAKSTVIKALQNLTIEFNVNKPKAYSA
TDYRGLFFNRGLIPGGVSLRFSSLGKGNEEVAHQHMDKISEERTAKRESRVFSMRVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 106446; Mature: 106315

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTTTPEINQLNKYIIDKKSIKLANDLWIRSVPLKDTPAEKYIVGTRKIPIDVAEKLQI
CCCCCCCCHHHHHHHHHCHHHHHHHHHHEEEECCCCCCCCCCEEECCCCCCHHHHHHHHH
RSLKGPIGIPEFDKNKPYNDYVVVPVYNLDDELVGLQIIQIDPAGNKATNPKNSDFFCKK
HHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECEEEEEECCCCCCCCCCCCCCHHHHH
YLGPTKPLREGKAAVINKTDNVNVVFIAEGVETAASVASLNEVRNNYSVLASMGVSELPA
HCCCCCCHHCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TLAYVKTHYPPGATVVLLKDHDDPVENPFANSEFDKAKKAFVDAGYRVIVKEPPTVKEDW
HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHH
NDVLAKGGVNELERQLNLNNPILCLPDTPARNSKVTPHFKSLYADLLKNEKLAEEQVVCG
HHHHHCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
LLDKVIGQLIDKLKKTQSSDDLHTTIKEIDEVIRTTEGVRTLLSENKISETKNIPRQLKG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LRRALKELKLLEDRRRDSLRENDDIDFSADPQTNSNGDLYKAYYFVMSRCLEHLGSLGPH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
GIFDLEKQSQILGLYQKRLKAIDNEIKRIPQLIAEFSGDDEIVGEIVIKQLKNKLKSLKL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ERELYAQEFHEMKQQLRLLRSAYPKGNTPYANYYEQFVEEANSTMMKGKTQAKAIREKLT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GVWANKKQELQEYYKKRIEAARQNFVYERKKAIPPLIEYLEGLRAIVKKRSEEIDKKALL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PESRNYQVQYLQAMEELSQSEGVDKILQDWLNNLENFKTVSPLIYYPPKEGETVDVVELI
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEHHHEE
DYDSDGEETLDELCKEIFVDKERLLETPMNVHDKGKKKREGKAGDSDPQVMSGPSGLAEG
CCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCHHCCCHHHCCCCCCCCCCCCCCCHHHHHH
LMQSIQPASLKTSNPLLYSTIKDFSERLAVRLYKSFEVISPTSGERQEFDGLALRKKGLS
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCHHHHHHCHH
IIERKTNDGTGPGLFQRNFCQQKIASKHDFVLKNVIAELKTQTSPEQFIDIKEPKPLGWY
HHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCEECCCCCCCCCC
SEDFTPEMQERLVNAAKSTVIKALQNLTIEFNVNKPKAYSATDYRGLFFNRGLIPGGVSL
CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHEECCCCCCCCEE
RFSSLGKGNEEVAHQHMDKISEERTAKRESRVFSMRVK
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure 
GKTTTPEINQLNKYIIDKKSIKLANDLWIRSVPLKDTPAEKYIVGTRKIPIDVAEKLQI
CCCCCCCHHHHHHHHHCHHHHHHHHHHEEEECCCCCCCCCCEEECCCCCCHHHHHHHHH
RSLKGPIGIPEFDKNKPYNDYVVVPVYNLDDELVGLQIIQIDPAGNKATNPKNSDFFCKK
HHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECEEEEEECCCCCCCCCCCCCCHHHHH
YLGPTKPLREGKAAVINKTDNVNVVFIAEGVETAASVASLNEVRNNYSVLASMGVSELPA
HCCCCCCHHCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TLAYVKTHYPPGATVVLLKDHDDPVENPFANSEFDKAKKAFVDAGYRVIVKEPPTVKEDW
HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHH
NDVLAKGGVNELERQLNLNNPILCLPDTPARNSKVTPHFKSLYADLLKNEKLAEEQVVCG
HHHHHCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
LLDKVIGQLIDKLKKTQSSDDLHTTIKEIDEVIRTTEGVRTLLSENKISETKNIPRQLKG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LRRALKELKLLEDRRRDSLRENDDIDFSADPQTNSNGDLYKAYYFVMSRCLEHLGSLGPH
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
GIFDLEKQSQILGLYQKRLKAIDNEIKRIPQLIAEFSGDDEIVGEIVIKQLKNKLKSLKL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ERELYAQEFHEMKQQLRLLRSAYPKGNTPYANYYEQFVEEANSTMMKGKTQAKAIREKLT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GVWANKKQELQEYYKKRIEAARQNFVYERKKAIPPLIEYLEGLRAIVKKRSEEIDKKALL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PESRNYQVQYLQAMEELSQSEGVDKILQDWLNNLENFKTVSPLIYYPPKEGETVDVVELI
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEHHHEE
DYDSDGEETLDELCKEIFVDKERLLETPMNVHDKGKKKREGKAGDSDPQVMSGPSGLAEG
CCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCHHCCCHHHCCCCCCCCCCCCCCCHHHHHH
LMQSIQPASLKTSNPLLYSTIKDFSERLAVRLYKSFEVISPTSGERQEFDGLALRKKGLS
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCHHHHHHCHH
IIERKTNDGTGPGLFQRNFCQQKIASKHDFVLKNVIAELKTQTSPEQFIDIKEPKPLGWY
HHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCEECCCCCCCCCC
SEDFTPEMQERLVNAAKSTVIKALQNLTIEFNVNKPKAYSATDYRGLFFNRGLIPGGVSL
CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHEECCCCCCCCEE
RFSSLGKGNEEVAHQHMDKISEERTAKRESRVFSMRVK
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA