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The map label for this gene is omp [H]

Identifier: 54293723

GI number: 54293723

Start: 883020

End: 883469

Strand: Direct

Name: omp [H]

Synonym: lpl0776

Alternate gene names: 54293723

Gene position: 883020-883469 (Clockwise)

Preceding gene: 54293722

Following gene: 54293724

Centisome position: 26.39

GC content: 44.0

Gene sequence:

>450_bases
ATGAAAAAATTAATTGTTGCATCATTATCCCTAACATTCATGCTGGGTGGCTGTGCCTCAATGAACAAAGAAGGTGTAGG
TACAATTACAGGTGGTGTAGTAGGTGGATTACTTGGTAGCCAGTTTGGTGGTGGTTCAGGTAAGGTTGCAGCTGCAGGAG
CAGGAGCATTATTAGGAGCTTACCTGGGTGGTCAAATTGGAAAAACAATGGATAAAGTAGACCGACTTGAAATGCAAAGG
GCCCTCGAAACAGCTCCAACAGGTAAAGCGGTTGCATGGTCAAATCCGGATACTGGATACCGTTATACTGTCCAGCCAAC
GAGAACTTATTATAATGCTCAACAACCTTGCCGTGAGTACATTACCAAAGCCATGATTGGTGGAAAAACCCAACAAATTT
ATGGTAAGGCCTGTCGTCAAGCTGACGGTTCGTGGCGTGTTGTAAATTAA

Upstream 100 bases:

>100_bases
AATTTCGGAGAGAGTACGTTACAAATAAGTTATGGATAATAACTGTTCGTGGTGGTAGAATGAAAACCGATTTTGTAACT
CTTTAAACAGGTGAACTGTA

Downstream 100 bases:

>100_bases
TTAATTGATTAAGATTGTTGGGGAAAACCCAACAATCTCATTTTATTATTCTAACCAATTAAGACAGGACTTACGAAAAA
CCCCCGTCTCTTTGTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKKLIVASLSLTFMLGGCASMNKEGVGTITGGVVGGLLGSQFGGGSGKVAAAGAGALLGAYLGGQIGKTMDKVDRLEMQR
ALETAPTGKAVAWSNPDTGYRYTVQPTRTYYNAQQPCREYITKAMIGGKTQQIYGKACRQADGSWRVVN

Sequences:

>Translated_149_residues
MKKLIVASLSLTFMLGGCASMNKEGVGTITGGVVGGLLGSQFGGGSGKVAAAGAGALLGAYLGGQIGKTMDKVDRLEMQR
ALETAPTGKAVAWSNPDTGYRYTVQPTRTYYNAQQPCREYITKAMIGGKTQQIYGKACRQADGSWRVVN
>Mature_149_residues
MKKLIVASLSLTFMLGGCASMNKEGVGTITGGVVGGLLGSQFGGGSGKVAAAGAGALLGAYLGGQIGKTMDKVDRLEMQR
ALETAPTGKAVAWSNPDTGYRYTVQPTRTYYNAQQPCREYITKAMIGGKTQQIYGKACRQADGSWRVVN

Specific function: Unknown

COG id: COG4520

COG function: function code M; Surface antigen

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rickettsiale 17 kDa surface antigen family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816
- InterPro:   IPR016364 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 15575; Mature: 15575

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIVASLSLTFMLGGCASMNKEGVGTITGGVVGGLLGSQFGGGSGKVAAAGAGALLGA
CCCCHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCEEECCHHHHHHH
YLGGQIGKTMDKVDRLEMQRALETAPTGKAVAWSNPDTGYRYTVQPTRTYYNAQQPCREY
HHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCHHHHHCCHHHHHHH
ITKAMIGGKTQQIYGKACRQADGSWRVVN
HHHHHHCCCHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MKKLIVASLSLTFMLGGCASMNKEGVGTITGGVVGGLLGSQFGGGSGKVAAAGAGALLGA
CCCCHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCEEECCHHHHHHH
YLGGQIGKTMDKVDRLEMQRALETAPTGKAVAWSNPDTGYRYTVQPTRTYYNAQQPCREY
HHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCHHHHHCCHHHHHHH
ITKAMIGGKTQQIYGKACRQADGSWRVVN
HHHHHHCCCHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA