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The map label for this gene is ybhR [H]

Identifier: 54293667

GI number: 54293667

Start: 807255

End: 808391

Strand: Direct

Name: ybhR [H]

Synonym: lpl0720

Alternate gene names: 54293667

Gene position: 807255-808391 (Clockwise)

Preceding gene: 54293666

Following gene: 54293670

Centisome position: 24.13

GC content: 38.35

Gene sequence:

>1137_bases
GTGAAGAGTCATTTTTCAATGCAACGTTTGTGGGCTATCATCCGCAAAGAATTCCTATTGATGAAACGTGATCCTGCTAC
TATCGTGATTATGGCAATCTTACCTTTGATTTTAGTTTGTATAGCCGGGTATGCCATAAACACCTATCCTCAAAAAGTTC
CTACGGTGTTAATCAATTTGGATAATACTGATGTAACACGTGAACTGGTTCGAGAGATACAAAATACAGGGTATTTTTCA
TTTGTGGCTTCGACGAACGATTCAGAATCAGCCCATCATTTATTGAAGACAGGCAAGGCTATCCTGGTATTGACTATTCC
TGTGAACTTTACCAAAGCACTTCGTCGAAACCAAAATCCAGCTCTTTTATTGGAAGATGGCAGTATCGATGCTATTGCTT
CAGGTAGAGCTATCATTGCTTTGGCGGGATTGAAATCATCATTTATAGAGAAAATGGGCCAAAAGGGTATTAATATTCCC
TTGCAGAGGCCTGATTTTCAAATCATAAACCACCGATTATATGATCCGGATCGCGTAACTCAATTTTATGTGGTTCCCGG
GATGATAGGCCTGGTGCTCATGTTAACGATGCTGCTGATAACTGTGGTTGTGGCATTTAGAGACGTTCAGGGCGGTACGA
TTGAATATTTATTAGCCTCACCGACCCGTCCATCAGAAATTTTATTAGGTGAAATTTTTTCTTATATTGTCATTGGCTAT
ATACAATTAAGTTTTGGTCTTATCTTGTCTTACTACTTATTCCACGTTCCGTTTATTGGCGCCCCTCTTCTTTTATATTT
ATGCACCTTACCTTATATTGTGGCGGAGTTATCGTTGGGTTTAACTATCGCCACTTTTTGTACATCCCAGTTTGAAGCAG
TGCAAGTGATCAATGTTTTCATTGCTTTTTCTATTTTGTTAACTGGATTTACTTTTCCGATATTTGGAATGCCTGAATGG
GCGCAATATTTAGGATTATTTTTGCCATTGACGCATTTTTTTAAGATTATGTTCGGCATTATGTTAAAAGGAAATAATTT
TGGTGAAATTTGGGCTAATTTATGGCCACTACTCGCGTATTGCCTTACCATGATTTCTTTAGCGACATGGCGATTTAAAA
GGCATTTTGTGCGATAG

Upstream 100 bases:

>100_bases
TATTGGATCCTTTCGTGTTGAACAATTATGAAATCAAAAAAGCAGATACTACTTTAGAGGACGCTTTCATTTATAAAATT
ATGAAAGAAGGGAATCCAAA

Downstream 100 bases:

>100_bases
AAGATACCTCAAGAATCATATTGATAAATGGTTGATTCATAATCCAACTGTGAGGAAGCGGACTTTTCAGGCATAAAAAT
TTTAATTTAATGCAATTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MKSHFSMQRLWAIIRKEFLLMKRDPATIVIMAILPLILVCIAGYAINTYPQKVPTVLINLDNTDVTRELVREIQNTGYFS
FVASTNDSESAHHLLKTGKAILVLTIPVNFTKALRRNQNPALLLEDGSIDAIASGRAIIALAGLKSSFIEKMGQKGINIP
LQRPDFQIINHRLYDPDRVTQFYVVPGMIGLVLMLTMLLITVVVAFRDVQGGTIEYLLASPTRPSEILLGEIFSYIVIGY
IQLSFGLILSYYLFHVPFIGAPLLLYLCTLPYIVAELSLGLTIATFCTSQFEAVQVINVFIAFSILLTGFTFPIFGMPEW
AQYLGLFLPLTHFFKIMFGIMLKGNNFGEIWANLWPLLAYCLTMISLATWRFKRHFVR

Sequences:

>Translated_378_residues
MKSHFSMQRLWAIIRKEFLLMKRDPATIVIMAILPLILVCIAGYAINTYPQKVPTVLINLDNTDVTRELVREIQNTGYFS
FVASTNDSESAHHLLKTGKAILVLTIPVNFTKALRRNQNPALLLEDGSIDAIASGRAIIALAGLKSSFIEKMGQKGINIP
LQRPDFQIINHRLYDPDRVTQFYVVPGMIGLVLMLTMLLITVVVAFRDVQGGTIEYLLASPTRPSEILLGEIFSYIVIGY
IQLSFGLILSYYLFHVPFIGAPLLLYLCTLPYIVAELSLGLTIATFCTSQFEAVQVINVFIAFSILLTGFTFPIFGMPEW
AQYLGLFLPLTHFFKIMFGIMLKGNNFGEIWANLWPLLAYCLTMISLATWRFKRHFVR
>Mature_378_residues
MKSHFSMQRLWAIIRKEFLLMKRDPATIVIMAILPLILVCIAGYAINTYPQKVPTVLINLDNTDVTRELVREIQNTGYFS
FVASTNDSESAHHLLKTGKAILVLTIPVNFTKALRRNQNPALLLEDGSIDAIASGRAIIALAGLKSSFIEKMGQKGINIP
LQRPDFQIINHRLYDPDRVTQFYVVPGMIGLVLMLTMLLITVVVAFRDVQGGTIEYLLASPTRPSEILLGEIFSYIVIGY
IQLSFGLILSYYLFHVPFIGAPLLLYLCTLPYIVAELSLGLTIATFCTSQFEAVQVINVFIAFSILLTGFTFPIFGMPEW
AQYLGLFLPLTHFFKIMFGIMLKGNNFGEIWANLWPLLAYCLTMISLATWRFKRHFVR

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=368, Percent_Identity=26.6304347826087, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1787011, Length=350, Percent_Identity=24.5714285714286, Blast_Score=121, Evalue=8e-29,
Organism=Escherichia coli, GI48994943, Length=363, Percent_Identity=25.3443526170799, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI226510979, Length=331, Percent_Identity=21.1480362537764, Blast_Score=72, Evalue=7e-14,
Organism=Drosophila melanogaster, GI85725260, Length=382, Percent_Identity=24.3455497382199, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI85725262, Length=382, Percent_Identity=24.869109947644, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24650855, Length=373, Percent_Identity=23.5924932975871, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24650853, Length=373, Percent_Identity=23.5924932975871, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42628; Mature: 42628

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSHFSMQRLWAIIRKEFLLMKRDPATIVIMAILPLILVCIAGYAINTYPQKVPTVLINL
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEC
DNTDVTRELVREIQNTGYFSFVASTNDSESAHHLLKTGKAILVLTIPVNFTKALRRNQNP
CCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHCCCCC
ALLLEDGSIDAIASGRAIIALAGLKSSFIEKMGQKGINIPLQRPDFQIINHRLYDPDRVT
EEEEECCCCCEECCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHE
QFYVVPGMIGLVLMLTMLLITVVVAFRDVQGGTIEYLLASPTRPSEILLGEIFSYIVIGY
EEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
IQLSFGLILSYYLFHVPFIGAPLLLYLCTLPYIVAELSLGLTIATFCTSQFEAVQVINVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IAFSILLTGFTFPIFGMPEWAQYLGLFLPLTHFFKIMFGIMLKGNNFGEIWANLWPLLAY
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
CLTMISLATWRFKRHFVR
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSHFSMQRLWAIIRKEFLLMKRDPATIVIMAILPLILVCIAGYAINTYPQKVPTVLINL
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEC
DNTDVTRELVREIQNTGYFSFVASTNDSESAHHLLKTGKAILVLTIPVNFTKALRRNQNP
CCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCEEEEEEECCCHHHHHHCCCCC
ALLLEDGSIDAIASGRAIIALAGLKSSFIEKMGQKGINIPLQRPDFQIINHRLYDPDRVT
EEEEECCCCCEECCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHE
QFYVVPGMIGLVLMLTMLLITVVVAFRDVQGGTIEYLLASPTRPSEILLGEIFSYIVIGY
EEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH
IQLSFGLILSYYLFHVPFIGAPLLLYLCTLPYIVAELSLGLTIATFCTSQFEAVQVINVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IAFSILLTGFTFPIFGMPEWAQYLGLFLPLTHFFKIMFGIMLKGNNFGEIWANLWPLLAY
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
CLTMISLATWRFKRHFVR
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]