Click here to switch to the map view.

The map label for this gene is yybO [H]

Identifier: 54293534

GI number: 54293534

Start: 633323

End: 634606

Strand: Direct

Name: yybO [H]

Synonym: lpl0585

Alternate gene names: 54293534

Gene position: 633323-634606 (Clockwise)

Preceding gene: 54293532

Following gene: 54293535

Centisome position: 18.93

GC content: 40.73

Gene sequence:

>1284_bases
ATGGGAATATCTAAAGTGGAAATTTATAAACGTAAAAATTACCTGGGTTTTGCGTGGTTAGTTTGGGGGTTGGCAGCTGC
TTTTTATTTTTCTGATTATTTAGCTAGAGTAGCGCCTGGTGTAATGCACCGATATCTACAAATGGACTTTGGCATTAATG
AGGCTGGCTTCGGCATATTAACTGCATCCTTCTATGTTCCATATATCTTAATGCAAATTCCTGTAGGATTGACAGTTGAT
CGATTAAGCATTCGATGGTTATTGACTATTATGTCATTAGTTACTGCTTTTGGTTGCTGTGTATTTGGCCTTGCGGATGG
TCTGCTGACTGCATCAATTGGAAGAATGTTGATTGGTTTCAGTGCCGCTTTTGCATTCATTTGCTCACTTCGCCTTGCCA
CTTCATGGTTTCCCCCAACTATGCTTGGATTATTATCTGGATTAACTCAAGCGTTAGGAATGCTTGGTGCTGCTGCAGGG
GAGGCCCCTGTTTCATTTTTAGTGAGTAATGTTGGCTGGCGCCATAGCATGCTGATTATCGCCTTCTTATTTATTGCCTT
ATCAGGATTATTGTATCAATTTGTGCAAGATAAACCCGGTGAGCATCGCAATGAAATTCGTTCTGTTAATCGAATCAGTA
TTTTGGATAGCTTAAAGATCATTTTATCAAATAAACAAACTTGGCTTAATGCGATGTATGCTGGGTTTTTATTTGGCCCC
ACCGCTGTAATTGGAGAGGCAATAGGTCCGGCATATTTACAGTTCGGGCGTGGTTTAGGGGCGCACGCAGCTGCATTTGC
AACAGGATTGATCTTTATAGGCTGGGGAATTAGTGGCCCATTATCAGGTTGGATTTCTGATAAAATGGGACGTCGTAAGC
CATTGATGATTATTTCCGCAGTATGTGGTGTGATCTTGAGCAGTTTATTTGTTTTTATTCCTGAAATGAGTCAAACAACG
GCCTACATACTATTTTTTGTTTTTGGCCTTACAAACACTGGAGTTGCGATTTCATACGCTGTTTCTACAGAAATACATGA
CAGGAGTGTTGTTGGTACATCTATCGCATTTACCAATATGACTTCAATTTTTGTCGGGGCCTTATTCCAGCCTTTAGTAG
GACGTATCATAGACATGGTGTCTGGGCCCAGAGCCTATAATGTTGAAACGCTATTATTATCGGATTTCCAAGCCGGTCTA
AAATTACTCCCCTTATGTTCCTTGGTGGCCTTAATCCTTGCGTTTACTGTTAAAGAGACTTATTGCAAACCCATAAGGCA
TTAA

Upstream 100 bases:

>100_bases
TATGTTGAAATAAGTTACAACAGCAGTATAATGATAAGTTATCATTGTTAATTTATTGATCATTTTTTAAATAAATACAG
CATGTGGTGGTTATACCAAA

Downstream 100 bases:

>100_bases
GAGATAGCAAAAATCAAACATTGAGCATTGCATGATAAATATGCCACCATTGTTTGATTTTTGCTGTAAATTACATCAAA
TTTATGAAATTTAATGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MGISKVEIYKRKNYLGFAWLVWGLAAAFYFSDYLARVAPGVMHRYLQMDFGINEAGFGILTASFYVPYILMQIPVGLTVD
RLSIRWLLTIMSLVTAFGCCVFGLADGLLTASIGRMLIGFSAAFAFICSLRLATSWFPPTMLGLLSGLTQALGMLGAAAG
EAPVSFLVSNVGWRHSMLIIAFLFIALSGLLYQFVQDKPGEHRNEIRSVNRISILDSLKIILSNKQTWLNAMYAGFLFGP
TAVIGEAIGPAYLQFGRGLGAHAAAFATGLIFIGWGISGPLSGWISDKMGRRKPLMIISAVCGVILSSLFVFIPEMSQTT
AYILFFVFGLTNTGVAISYAVSTEIHDRSVVGTSIAFTNMTSIFVGALFQPLVGRIIDMVSGPRAYNVETLLLSDFQAGL
KLLPLCSLVALILAFTVKETYCKPIRH

Sequences:

>Translated_427_residues
MGISKVEIYKRKNYLGFAWLVWGLAAAFYFSDYLARVAPGVMHRYLQMDFGINEAGFGILTASFYVPYILMQIPVGLTVD
RLSIRWLLTIMSLVTAFGCCVFGLADGLLTASIGRMLIGFSAAFAFICSLRLATSWFPPTMLGLLSGLTQALGMLGAAAG
EAPVSFLVSNVGWRHSMLIIAFLFIALSGLLYQFVQDKPGEHRNEIRSVNRISILDSLKIILSNKQTWLNAMYAGFLFGP
TAVIGEAIGPAYLQFGRGLGAHAAAFATGLIFIGWGISGPLSGWISDKMGRRKPLMIISAVCGVILSSLFVFIPEMSQTT
AYILFFVFGLTNTGVAISYAVSTEIHDRSVVGTSIAFTNMTSIFVGALFQPLVGRIIDMVSGPRAYNVETLLLSDFQAGL
KLLPLCSLVALILAFTVKETYCKPIRH
>Mature_426_residues
GISKVEIYKRKNYLGFAWLVWGLAAAFYFSDYLARVAPGVMHRYLQMDFGINEAGFGILTASFYVPYILMQIPVGLTVDR
LSIRWLLTIMSLVTAFGCCVFGLADGLLTASIGRMLIGFSAAFAFICSLRLATSWFPPTMLGLLSGLTQALGMLGAAAGE
APVSFLVSNVGWRHSMLIIAFLFIALSGLLYQFVQDKPGEHRNEIRSVNRISILDSLKIILSNKQTWLNAMYAGFLFGPT
AVIGEAIGPAYLQFGRGLGAHAAAFATGLIFIGWGISGPLSGWISDKMGRRKPLMIISAVCGVILSSLFVFIPEMSQTTA
YILFFVFGLTNTGVAISYAVSTEIHDRSVVGTSIAFTNMTSIFVGALFQPLVGRIIDMVSGPRAYNVETLLLSDFQAGLK
LLPLCSLVALILAFTVKETYCKPIRH

Specific function: Uptake Of D-Glucarate. [C]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI1789152, Length=437, Percent_Identity=22.6544622425629, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46396; Mature: 46264

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCC
>Mature Secondary Structure 
GISKVEIYKRKNYLGFAWLVWGLAAAFYFSDYLARVAPGVMHRYLQMDFGINEAGFGIL
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH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HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]