Definition | Legionella pneumophila str. Lens, complete genome. |
---|---|
Accession | NC_006369 |
Length | 3,345,687 |
Click here to switch to the map view.
The map label for this gene is crcB [H]
Identifier: 54293501
GI number: 54293501
Start: 598894
End: 599298
Strand: Direct
Name: crcB [H]
Synonym: lpl0550
Alternate gene names: 54293501
Gene position: 598894-599298 (Clockwise)
Preceding gene: 54293500
Following gene: 54293502
Centisome position: 17.9
GC content: 36.79
Gene sequence:
>405_bases ATGGTTGTTGCACCCTATTTGGCTGTAGCTATCGGAGGCTCTTTAGGCGCAATGTCTCGTTATTTAGTTACAATAATGGC GCAAAATGCCTGGGGGATTAAATTTCCTTATGGTACTCTTTTAGTGAACACACTAGGTTCTTTTCTAGCTGGTTTTTTTC TTATTGTATTAGTAGGTCGTTTTAGCGCCGAGGAGTCGTTTCGTTTATTCCTTTTTACGGGATTTTTAGGAGCTTTTACT ACCTTTTCGAGTTTCGCTGCAGAATCTTTATTTATGTTTGAGCAAGGATATTGGTTTAAATTAATTACCAATATACTGGT TAATAATGTTGGCTCATTGTCCATGGTCTTTGTTGGAACATTAGTTGCTAAATATGTATTATTAGGACATCAGGGCTCCA ATTAA
Upstream 100 bases:
>100_bases GGCGGTTTCAGAATTAGAGTTGATTCAAAATGAGTGTCCAGAAATTACTCCTATGATTGATGCTTTGAATCAATCCACAA GAGGCATTGTGAGGTAAGCA
Downstream 100 bases:
>100_bases TAATTTTTAGAGTGTTGGCTTATGTTAGATAATCAATTACTTAGAGAGAATCCTCAATATGTAGCAACCCAATTGCTGAA GCGAGGATTTCAATTTGATG
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MVVAPYLAVAIGGSLGAMSRYLVTIMAQNAWGIKFPYGTLLVNTLGSFLAGFFLIVLVGRFSAEESFRLFLFTGFLGAFT TFSSFAAESLFMFEQGYWFKLITNILVNNVGSLSMVFVGTLVAKYVLLGHQGSN
Sequences:
>Translated_134_residues MVVAPYLAVAIGGSLGAMSRYLVTIMAQNAWGIKFPYGTLLVNTLGSFLAGFFLIVLVGRFSAEESFRLFLFTGFLGAFT TFSSFAAESLFMFEQGYWFKLITNILVNNVGSLSMVFVGTLVAKYVLLGHQGSN >Mature_134_residues MVVAPYLAVAIGGSLGAMSRYLVTIMAQNAWGIKFPYGTLLVNTLGSFLAGFFLIVLVGRFSAEESFRLFLFTGFLGAFT TFSSFAAESLFMFEQGYWFKLITNILVNNVGSLSMVFVGTLVAKYVLLGHQGSN
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
Organism=Escherichia coli, GI1786842, Length=109, Percent_Identity=34.8623853211009, Blast_Score=61, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 14580; Mature: 14580
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVAPYLAVAIGGSLGAMSRYLVTIMAQNAWGIKFPYGTLLVNTLGSFLAGFFLIVLVGR CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH FSAEESFRLFLFTGFLGAFTTFSSFAAESLFMFEQGYWFKLITNILVNNVGSLSMVFVGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHH LVAKYVLLGHQGSN HHHHHHHHCCCCCC >Mature Secondary Structure MVVAPYLAVAIGGSLGAMSRYLVTIMAQNAWGIKFPYGTLLVNTLGSFLAGFFLIVLVGR CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHH FSAEESFRLFLFTGFLGAFTTFSSFAAESLFMFEQGYWFKLITNILVNNVGSLSMVFVGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHH LVAKYVLLGHQGSN HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA