Definition | Legionella pneumophila str. Lens, complete genome. |
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Accession | NC_006369 |
Length | 3,345,687 |
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The map label for this gene is 54293487
Identifier: 54293487
GI number: 54293487
Start: 583136
End: 584251
Strand: Direct
Name: 54293487
Synonym: lpl0536
Alternate gene names: NA
Gene position: 583136-584251 (Clockwise)
Preceding gene: 54293485
Following gene: 54293493
Centisome position: 17.43
GC content: 36.11
Gene sequence:
>1116_bases ATGCCCTATTTCTATACAAGATCGGCACCTTTGTTTTTTGTATTCGTTATTGCACTTATTTTTATAAATTTTTCCTATGC CCATGAATTTCAAACTGATTCAAAAAATAAACATAAAGTGGATGTTCACATAGGTATCTATGCTCCATTTTCCAGTCATT CAGCTTTTATTGGAAGAAATATTCTGGCTGCAATGGAAATGGGCAGCGAACGGTTACAGTCCTCCGATATTCATTATTCA TTTTATACTCTGGATCAACTTCCTAAAAATAAGAATGCTGGTCTTGTGCTGCAAAAATTTATTGATACCCATCATATCAA TGTGTTGGTGACTGGAGGTAAAGAAACGGGGTTAATAGCAGCTCCCATAGCAAAGAAAAACAATTTGATTCATTTTAGTC TGACCAACAATACTGAAGTTGCAGACGGCAGAAATAATTTTATCGTCTGGAGTCCAGCTTATGACCAAGCCAAGGTTTTG GTTAACGAACTAAAACGTCAGCATGTCCATCACTTGGGAATTATTACGGCAAATCAACCGTCCTCAACTGCTTTGACACA TAGTGTTATAAAACAATTACAGGCTGATTCTCATATTGATGTGGCTGCCTCCGAGTATTTTGAACCTGGAAATAAGGATT TTTCAAGATTAACTAACAGAATTAAAAGAAAAAATGCAGATATGTATTTAGTAATGGCATCACCTGAGGATATTAAATTA ATACAAGAACAAATGGAGGCAGATAAACAGCATGTGCCCATTACCAGTATAGTTGAGCGTGCTACTCCAGAAGTGGTAAA GGTATTTGAAGGTCAATGGTATGTTGATTCTCATGAGATGCAGCCTGATTTTATTAATGAATTTAAACAAAATTATTTAA ATTATCCTGTAACTGAGGCAGGTTACGCGTTTGATTTATTTCAGCTTTTGAACAAAAGCATAGTAATGGCAATAAGAACA CAAGGTTCTCCTACAAGCCAGGAAGTCGTTCATCAACTCCATAACATTGCCAATGGAACAGGCGTAATGGGAACTATGGT ATTGGACAGTAAGGGTTCTTTATTTACCAAATCTGAAGTGAAAACTGTGAAAAATGGCGAGATTCATACTGTCTAG
Upstream 100 bases:
>100_bases TATCATGCAATCTCTTATTATTTTTTACGAAATGATAATGATTGTATTTTTTTATTATTCATTGCAGAATGTTTTTAAGG TTTAACACATGGAAGAAAAA
Downstream 100 bases:
>100_bases GTAGAAAATAAAGCCTGAAATCATCAGCTCATTGTGAATCGATGATTTCAGGCGAGAGTGACTAATTGGTCATTATCTGT TAGCTAACGCCATTCCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MPYFYTRSAPLFFVFVIALIFINFSYAHEFQTDSKNKHKVDVHIGIYAPFSSHSAFIGRNILAAMEMGSERLQSSDIHYS FYTLDQLPKNKNAGLVLQKFIDTHHINVLVTGGKETGLIAAPIAKKNNLIHFSLTNNTEVADGRNNFIVWSPAYDQAKVL VNELKRQHVHHLGIITANQPSSTALTHSVIKQLQADSHIDVAASEYFEPGNKDFSRLTNRIKRKNADMYLVMASPEDIKL IQEQMEADKQHVPITSIVERATPEVVKVFEGQWYVDSHEMQPDFINEFKQNYLNYPVTEAGYAFDLFQLLNKSIVMAIRT QGSPTSQEVVHQLHNIANGTGVMGTMVLDSKGSLFTKSEVKTVKNGEIHTV
Sequences:
>Translated_371_residues MPYFYTRSAPLFFVFVIALIFINFSYAHEFQTDSKNKHKVDVHIGIYAPFSSHSAFIGRNILAAMEMGSERLQSSDIHYS FYTLDQLPKNKNAGLVLQKFIDTHHINVLVTGGKETGLIAAPIAKKNNLIHFSLTNNTEVADGRNNFIVWSPAYDQAKVL VNELKRQHVHHLGIITANQPSSTALTHSVIKQLQADSHIDVAASEYFEPGNKDFSRLTNRIKRKNADMYLVMASPEDIKL IQEQMEADKQHVPITSIVERATPEVVKVFEGQWYVDSHEMQPDFINEFKQNYLNYPVTEAGYAFDLFQLLNKSIVMAIRT QGSPTSQEVVHQLHNIANGTGVMGTMVLDSKGSLFTKSEVKTVKNGEIHTV >Mature_370_residues PYFYTRSAPLFFVFVIALIFINFSYAHEFQTDSKNKHKVDVHIGIYAPFSSHSAFIGRNILAAMEMGSERLQSSDIHYSF YTLDQLPKNKNAGLVLQKFIDTHHINVLVTGGKETGLIAAPIAKKNNLIHFSLTNNTEVADGRNNFIVWSPAYDQAKVLV NELKRQHVHHLGIITANQPSSTALTHSVIKQLQADSHIDVAASEYFEPGNKDFSRLTNRIKRKNADMYLVMASPEDIKLI QEQMEADKQHVPITSIVERATPEVVKVFEGQWYVDSHEMQPDFINEFKQNYLNYPVTEAGYAFDLFQLLNKSIVMAIRTQ GSPTSQEVVHQLHNIANGTGVMGTMVLDSKGSLFTKSEVKTVKNGEIHTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41812; Mature: 41681
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYFYTRSAPLFFVFVIALIFINFSYAHEFQTDSKNKHKVDVHIGIYAPFSSHSAFIGRN CCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHH ILAAMEMGSERLQSSDIHYSFYTLDQLPKNKNAGLVLQKFIDTHHINVLVTGGKETGLIA HHHHHHHCHHHHHCCCCEEEEEEHHHCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCEEE APIAKKNNLIHFSLTNNTEVADGRNNFIVWSPAYDQAKVLVNELKRQHVHHLGIITANQP ECCCCCCCEEEEEECCCCEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHEEEEECCCC SSTALTHSVIKQLQADSHIDVAASEYFEPGNKDFSRLTNRIKRKNADMYLVMASPEDIKL CCHHHHHHHHHHHCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHH IQEQMEADKQHVPITSIVERATPEVVKVFEGQWYVDSHEMQPDFINEFKQNYLNYPVTEA HHHHHHCCCCCCCHHHHHHHCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCC GYAFDLFQLLNKSIVMAIRTQGSPTSQEVVHQLHNIANGTGVMGTMVLDSKGSLFTKSEV CHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHH KTVKNGEIHTV HHCCCCCEECC >Mature Secondary Structure PYFYTRSAPLFFVFVIALIFINFSYAHEFQTDSKNKHKVDVHIGIYAPFSSHSAFIGRN CEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHH ILAAMEMGSERLQSSDIHYSFYTLDQLPKNKNAGLVLQKFIDTHHINVLVTGGKETGLIA HHHHHHHCHHHHHCCCCEEEEEEHHHCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCEEE APIAKKNNLIHFSLTNNTEVADGRNNFIVWSPAYDQAKVLVNELKRQHVHHLGIITANQP ECCCCCCCEEEEEECCCCEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHEEEEECCCC SSTALTHSVIKQLQADSHIDVAASEYFEPGNKDFSRLTNRIKRKNADMYLVMASPEDIKL CCHHHHHHHHHHHCCCCCCEEHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHH IQEQMEADKQHVPITSIVERATPEVVKVFEGQWYVDSHEMQPDFINEFKQNYLNYPVTEA HHHHHHCCCCCCCHHHHHHHCCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCC GYAFDLFQLLNKSIVMAIRTQGSPTSQEVVHQLHNIANGTGVMGTMVLDSKGSLFTKSEV CHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHH KTVKNGEIHTV HHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA