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The map label for this gene is icmK/dotH

Identifier: 54293443

GI number: 54293443

Start: 533370

End: 534452

Strand: Direct

Name: icmK/dotH

Synonym: lpl0492

Alternate gene names: NA

Gene position: 533370-534452 (Clockwise)

Preceding gene: 54293442

Following gene: 54293444

Centisome position: 15.94

GC content: 42.38

Gene sequence:

>1083_bases
ATGAAGAAATATGATCAATTATGTAAATATTGTTTGGTTATAGGCTTGACATTCAGTATGTCATGCAGCACCTATGCGGC
TGATCAATCAGATGATGCTCAGCAAGCGTTGCAGCAACTGCGAATGCTACAACAGAAATTATCACAAAACCCATCCCCTG
ATGCACAGTCTGGAGCCGGTGATGGCGGTGATAATGCAGCTTCTAATTCAACGCAACAACCTAATCAATCCGGTCAGGCT
AATGCTCCGGCGGCAAATCAATCAGCAAATGCGGGCGGTGATGGGCAGATAATTAATCAAGATGATGCCGAAGTTATTGA
TAAGAAGGCATTTAAGGATATGACACGCAACTTATATCCCTTAAATCCTGAGCAAGTAGTCAAATTAAAACAAATTTATG
AAACTTCAGAATATGCCAAAGCTTCAACGGCAGGCACTCCACCTAAACCTACAGCGACATCACAATTTGTTAATCTGTCT
CCAGGCTCAACACCACCGGTAATAAGATTATCACAAGGTTTTGTGTCTTCCTTAGTGTTCCTGGATTCAACAGGAGCCCC
TTGGCCTATTGCTGCATATGATTTGGGTGATCCCTCTTCGTTTAATATTCAATGGGATAAAACCAGTAATACTTTAATGA
TTCAAGCTACGAAGCTATATAATTATGGTAACTTGGCAGTAAGGTTAAGAGGATTAAATACCCCTGTCATGCTTACTCTT
ATACCTGGTCAGAAAGCTGTGGATTATCGAGTAGACTTGAGAGTTCAAGGCTATGGCCCCAACGCTAAAAGTATGCCAAC
TGAAGAAGGCATTCCCCCATCAGCGAATGATTTACTTCTTCATGTGTTAGAAGGTGTTCCTCCGCCAGGGAGCAGGCGTC
TCGTGGTTAGTGGTGGGGATGCTCGAGCTTGGTTATCTAATGAAAAAATGTATGTTAGAACGAATCTCACTATATTGTCG
CCGGGCTGGTTAGCCAGTATGACTAGCGCAGATGGAACGCATGCTTATGAAATGCAAAAATCTCCGGTTTTATTAGTGTC
TTGGCATGGAAAAGTCATGCAACTCAAGGTAGAAGGGTTATAA

Upstream 100 bases:

>100_bases
TAACAATGTTAATAACTAGAGTTTCAACGTTGAATTCGCCTAGAGGAATAGGTATTTCACAATTTGTTGTTGGACCTGCC
AGCGGTGGGGTATCCTAGTG

Downstream 100 bases:

>100_bases
GCAAATGGCGAGCAAAAAAGAAAATCTAAAGTCACTGTTTTCCAATACTCGGACTCGAGTGATTATCGTTTTTACTGCAG
CTTTATTAATCATCGCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: TraN Protein; TraN Conjugal Transfer Protein; TraN-Like Protein; Conjugal Transfer Protein; Type IV Secretion System Protein IcmK/DotH

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKKYDQLCKYCLVIGLTFSMSCSTYAADQSDDAQQALQQLRMLQQKLSQNPSPDAQSGAGDGGDNAASNSTQQPNQSGQA
NAPAANQSANAGGDGQIINQDDAEVIDKKAFKDMTRNLYPLNPEQVVKLKQIYETSEYAKASTAGTPPKPTATSQFVNLS
PGSTPPVIRLSQGFVSSLVFLDSTGAPWPIAAYDLGDPSSFNIQWDKTSNTLMIQATKLYNYGNLAVRLRGLNTPVMLTL
IPGQKAVDYRVDLRVQGYGPNAKSMPTEEGIPPSANDLLLHVLEGVPPPGSRRLVVSGGDARAWLSNEKMYVRTNLTILS
PGWLASMTSADGTHAYEMQKSPVLLVSWHGKVMQLKVEGL

Sequences:

>Translated_360_residues
MKKYDQLCKYCLVIGLTFSMSCSTYAADQSDDAQQALQQLRMLQQKLSQNPSPDAQSGAGDGGDNAASNSTQQPNQSGQA
NAPAANQSANAGGDGQIINQDDAEVIDKKAFKDMTRNLYPLNPEQVVKLKQIYETSEYAKASTAGTPPKPTATSQFVNLS
PGSTPPVIRLSQGFVSSLVFLDSTGAPWPIAAYDLGDPSSFNIQWDKTSNTLMIQATKLYNYGNLAVRLRGLNTPVMLTL
IPGQKAVDYRVDLRVQGYGPNAKSMPTEEGIPPSANDLLLHVLEGVPPPGSRRLVVSGGDARAWLSNEKMYVRTNLTILS
PGWLASMTSADGTHAYEMQKSPVLLVSWHGKVMQLKVEGL
>Mature_360_residues
MKKYDQLCKYCLVIGLTFSMSCSTYAADQSDDAQQALQQLRMLQQKLSQNPSPDAQSGAGDGGDNAASNSTQQPNQSGQA
NAPAANQSANAGGDGQIINQDDAEVIDKKAFKDMTRNLYPLNPEQVVKLKQIYETSEYAKASTAGTPPKPTATSQFVNLS
PGSTPPVIRLSQGFVSSLVFLDSTGAPWPIAAYDLGDPSSFNIQWDKTSNTLMIQATKLYNYGNLAVRLRGLNTPVMLTL
IPGQKAVDYRVDLRVQGYGPNAKSMPTEEGIPPSANDLLLHVLEGVPPPGSRRLVVSGGDARAWLSNEKMYVRTNLTILS
PGWLASMTSADGTHAYEMQKSPVLLVSWHGKVMQLKVEGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38798; Mature: 38798

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYDQLCKYCLVIGLTFSMSCSTYAADQSDDAQQALQQLRMLQQKLSQNPSPDAQSGAG
CCHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DGGDNAASNSTQQPNQSGQANAPAANQSANAGGDGQIINQDDAEVIDKKAFKDMTRNLYP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCC
LNPEQVVKLKQIYETSEYAKASTAGTPPKPTATSQFVNLSPGSTPPVIRLSQGFVSSLVF
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEECHHHHHEEEE
LDSTGAPWPIAAYDLGDPSSFNIQWDKTSNTLMIQATKLYNYGNLAVRLRGLNTPVMLTL
EECCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCCEEEEE
IPGQKAVDYRVDLRVQGYGPNAKSMPTEEGIPPSANDLLLHVLEGVPPPGSRRLVVSGGD
CCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCC
ARAWLSNEKMYVRTNLTILSPGWLASMTSADGTHAYEMQKSPVLLVSWHGKVMQLKVEGL
CEEEECCCEEEEEEEEEEECCCHHEEECCCCCCEEEEECCCCEEEEEECCEEEEEEEECC
>Mature Secondary Structure
MKKYDQLCKYCLVIGLTFSMSCSTYAADQSDDAQQALQQLRMLQQKLSQNPSPDAQSGAG
CCHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
DGGDNAASNSTQQPNQSGQANAPAANQSANAGGDGQIINQDDAEVIDKKAFKDMTRNLYP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCC
LNPEQVVKLKQIYETSEYAKASTAGTPPKPTATSQFVNLSPGSTPPVIRLSQGFVSSLVF
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEECHHHHHEEEE
LDSTGAPWPIAAYDLGDPSSFNIQWDKTSNTLMIQATKLYNYGNLAVRLRGLNTPVMLTL
EECCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCCEEEEE
IPGQKAVDYRVDLRVQGYGPNAKSMPTEEGIPPSANDLLLHVLEGVPPPGSRRLVVSGGD
CCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCC
ARAWLSNEKMYVRTNLTILSPGWLASMTSADGTHAYEMQKSPVLLVSWHGKVMQLKVEGL
CEEEECCCEEEEEEEEEEECCCHHEEECCCCCCEEEEECCCCEEEEEECCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA