Click here to switch to the map view.

The map label for this gene is 54293431

Identifier: 54293431

GI number: 54293431

Start: 521696

End: 523705

Strand: Direct

Name: 54293431

Synonym: lpl0480

Alternate gene names: NA

Gene position: 521696-523705 (Clockwise)

Preceding gene: 54293429

Following gene: 54293433

Centisome position: 15.59

GC content: 36.72

Gene sequence:

>2010_bases
ATGCAAAACTTAGATGAGATTCTAAAGAAACTGGGGGAAGATCTGGAAAAGACTTCGAAAGAAACGGCTAATAAGCTAAG
TGTTTTATCAAGGAAAGTTGCTGAAGATGTGGTTAGGGTATCCGATGAAACGGTTCAAAAAATTAATGAAGTAACCAAAA
AATTCTCTGTAGATACTACAGTCAGCACTATTGACACCCAAAAAATTTTAGATGATTTTATGAAAAATATACGTTTTTCT
CGATTTAAGCAGATTTGGCAAGCAATTGAGGAAACACCGAAATCCAAGCATATATTGTTAAAATCTCTCTTCTTAAAAGG
GCTATTGACTCATAATAAACCTCTACTTGAAGAAATTATACGACAAATTGAATTAATACCTTACTCAAGTGATCTGGAGA
TGCTCGGTGCTTTTAGTCAGGACAAAGCACATCCGCTCTCACCTGAGCTTCTGGAGTTTGTGCAAGAGATGCTTGCCAAT
GAAAGTGAGAAAGTATTGCTCACTATTCTGATGAATGCTTTCCAGTCTATCCCTGAGTTGTCTCTTGATAGCAAGACAGG
GACTTTAAGCATGAAAACTAAAAAAGCCTTACTGCCTCTTTTAATAGAAAAAGCGGATACTTCGATTGCAAAATCAATCA
TGTCACAATTAACTGATATCTCATTTGACTCTGTATTACCCGCATTTCGTCCATCGATTAGTGATCCCAGCTATCAGAAA
ACGAACATAAACGTGAGCAAATACTTGTCTCTTGTTGGTGACAAAACAGATATTTCAGAGTTTTTAATATTAACGATTGG
TCTTTTTACTTCCTTAAAAATTGGAGATAAGGGTTTTTTGCAAGAATTATCGGCTGATTATTTATTTGTTCGATATGATG
ACTGCTTGCATAAAATAATAGAAAAACTAAAGGAAAAAGAAGTAATAGAACAATTAGGAGAAGAAAAAATTCAAAAAATT
ATGAGAGCTGTAGAAAGCCTTCAGAAATTTAATCCTACGAGTAATGACCCAAGACGTTTTTTTGAAACTCGCCTTGCTCA
GTACATTAACGGTCTTTCCCACTCAGAAAAGACCATTGAAATTGATTCGATAGGAGAAGATAAAGAGCCTGAAGATGAGG
AATTGAGAGATAACACATTGAAGGCATGTAATAAAATTCTGCAATTCTTTTTGGGTGATTGTGGAAGAGTTGATACTCCA
CGGGAGATGGAACAAAAAATTTGTATCTTTGCCAATGGTTATAAGGATACCTCTAAATTTAACAAGAAAGAAGTCGAATT
TATTACCGGTGTATTACATCATGCTGGAGCGCATAAAGGGCGCGATAGGGTTGAGCGGGATAAATTGACGGGCATTAAAG
AAAGAAAATTTGAGACTGACTCAGAAAAAGTAGGTTCAGATGTATGGAATTGTGGCGGTGGAGTCATGAAAGGCTGTTCG
CCTGTCTTTTATGATGCTCAACGCGACCCCATGCGTAATATGCTAGTCGATTCTTCAACGGTTGCTCCTAATAACAAAGA
GGGAAAACAATGGTTTTGGAATAATAACCGTCAGTATTCGTCTTACGTAGGATCGATTTCCGGACATACTTGCAATATTG
TGGGTATGTTAGCCAAGTATATGGAAAATTATAAGGAAGATCCTGATCTGCAAAACGATATCAATCTTTTTCTTATTCAG
GTCATAGGTGTTTATGCCAAGCGCGGTTTTCATGCCATGCTTGAAGTCATTGATGTTCTTCATGATCCTTATGTACAAGA
CATATTCAAAGGATATGGTGTTCAAGTTAACCTTTATAGCTCTTTTAAAGAAACCCCTGAGCTTGCTGGATTCCTGCAGC
ATGCGATGAATGATGCAACCACTTATACTCAGGCTCTTGTTAATAAGAAGCATGTCAAGGAAGTGCTACAATCCAAATCA
CATCCATTATTCTTCAGCAAGAAAATTGAAGAGAGTGGGGATAAGAAAAATGACCATACCCCAAAAGATGGAAATGTTTA
TGGGTGTTAG

Upstream 100 bases:

>100_bases
TTGAACAATAAGTTTAATATTTTCTTAATCTTTTTGTTTTATCATACCCCTTGTGAAATATAAGTTGTCAGGCAAGACAA
TGTTAAGAGGTAGAGTTTAT

Downstream 100 bases:

>100_bases
GGGATTAATTTGAGATCCCGTTGTCTATTTGCCTCGGCTTGTCCCTGAGAGATGGTCACATTTTGTGACCATCTCTCAGG
GACAAGCCGAGGCACCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 669; Mature: 669

Protein sequence:

>669_residues
MQNLDEILKKLGEDLEKTSKETANKLSVLSRKVAEDVVRVSDETVQKINEVTKKFSVDTTVSTIDTQKILDDFMKNIRFS
RFKQIWQAIEETPKSKHILLKSLFLKGLLTHNKPLLEEIIRQIELIPYSSDLEMLGAFSQDKAHPLSPELLEFVQEMLAN
ESEKVLLTILMNAFQSIPELSLDSKTGTLSMKTKKALLPLLIEKADTSIAKSIMSQLTDISFDSVLPAFRPSISDPSYQK
TNINVSKYLSLVGDKTDISEFLILTIGLFTSLKIGDKGFLQELSADYLFVRYDDCLHKIIEKLKEKEVIEQLGEEKIQKI
MRAVESLQKFNPTSNDPRRFFETRLAQYINGLSHSEKTIEIDSIGEDKEPEDEELRDNTLKACNKILQFFLGDCGRVDTP
REMEQKICIFANGYKDTSKFNKKEVEFITGVLHHAGAHKGRDRVERDKLTGIKERKFETDSEKVGSDVWNCGGGVMKGCS
PVFYDAQRDPMRNMLVDSSTVAPNNKEGKQWFWNNNRQYSSYVGSISGHTCNIVGMLAKYMENYKEDPDLQNDINLFLIQ
VIGVYAKRGFHAMLEVIDVLHDPYVQDIFKGYGVQVNLYSSFKETPELAGFLQHAMNDATTYTQALVNKKHVKEVLQSKS
HPLFFSKKIEESGDKKNDHTPKDGNVYGC

Sequences:

>Translated_669_residues
MQNLDEILKKLGEDLEKTSKETANKLSVLSRKVAEDVVRVSDETVQKINEVTKKFSVDTTVSTIDTQKILDDFMKNIRFS
RFKQIWQAIEETPKSKHILLKSLFLKGLLTHNKPLLEEIIRQIELIPYSSDLEMLGAFSQDKAHPLSPELLEFVQEMLAN
ESEKVLLTILMNAFQSIPELSLDSKTGTLSMKTKKALLPLLIEKADTSIAKSIMSQLTDISFDSVLPAFRPSISDPSYQK
TNINVSKYLSLVGDKTDISEFLILTIGLFTSLKIGDKGFLQELSADYLFVRYDDCLHKIIEKLKEKEVIEQLGEEKIQKI
MRAVESLQKFNPTSNDPRRFFETRLAQYINGLSHSEKTIEIDSIGEDKEPEDEELRDNTLKACNKILQFFLGDCGRVDTP
REMEQKICIFANGYKDTSKFNKKEVEFITGVLHHAGAHKGRDRVERDKLTGIKERKFETDSEKVGSDVWNCGGGVMKGCS
PVFYDAQRDPMRNMLVDSSTVAPNNKEGKQWFWNNNRQYSSYVGSISGHTCNIVGMLAKYMENYKEDPDLQNDINLFLIQ
VIGVYAKRGFHAMLEVIDVLHDPYVQDIFKGYGVQVNLYSSFKETPELAGFLQHAMNDATTYTQALVNKKHVKEVLQSKS
HPLFFSKKIEESGDKKNDHTPKDGNVYGC
>Mature_669_residues
MQNLDEILKKLGEDLEKTSKETANKLSVLSRKVAEDVVRVSDETVQKINEVTKKFSVDTTVSTIDTQKILDDFMKNIRFS
RFKQIWQAIEETPKSKHILLKSLFLKGLLTHNKPLLEEIIRQIELIPYSSDLEMLGAFSQDKAHPLSPELLEFVQEMLAN
ESEKVLLTILMNAFQSIPELSLDSKTGTLSMKTKKALLPLLIEKADTSIAKSIMSQLTDISFDSVLPAFRPSISDPSYQK
TNINVSKYLSLVGDKTDISEFLILTIGLFTSLKIGDKGFLQELSADYLFVRYDDCLHKIIEKLKEKEVIEQLGEEKIQKI
MRAVESLQKFNPTSNDPRRFFETRLAQYINGLSHSEKTIEIDSIGEDKEPEDEELRDNTLKACNKILQFFLGDCGRVDTP
REMEQKICIFANGYKDTSKFNKKEVEFITGVLHHAGAHKGRDRVERDKLTGIKERKFETDSEKVGSDVWNCGGGVMKGCS
PVFYDAQRDPMRNMLVDSSTVAPNNKEGKQWFWNNNRQYSSYVGSISGHTCNIVGMLAKYMENYKEDPDLQNDINLFLIQ
VIGVYAKRGFHAMLEVIDVLHDPYVQDIFKGYGVQVNLYSSFKETPELAGFLQHAMNDATTYTQALVNKKHVKEVLQSKS
HPLFFSKKIEESGDKKNDHTPKDGNVYGC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76135; Mature: 76135

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLDEILKKLGEDLEKTSKETANKLSVLSRKVAEDVVRVSDETVQKINEVTKKFSVDTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
VSTIDTQKILDDFMKNIRFSRFKQIWQAIEETPKSKHILLKSLFLKGLLTHNKPLLEEII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
RQIELIPYSSDLEMLGAFSQDKAHPLSPELLEFVQEMLANESEKVLLTILMNAFQSIPEL
HHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
SLDSKTGTLSMKTKKALLPLLIEKADTSIAKSIMSQLTDISFDSVLPAFRPSISDPSYQK
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
TNINVSKYLSLVGDKTDISEFLILTIGLFTSLKIGDKGFLQELSADYLFVRYDDCLHKII
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEHHHHHHHHH
EKLKEKEVIEQLGEEKIQKIMRAVESLQKFNPTSNDPRRFFETRLAQYINGLSHSEKTIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEE
IDSIGEDKEPEDEELRDNTLKACNKILQFFLGDCGRVDTPREMEQKICIFANGYKDTSKF
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCEEEEECCCCCHHHC
NKKEVEFITGVLHHAGAHKGRDRVERDKLTGIKERKFETDSEKVGSDVWNCGGGVMKGCS
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCHHHHCCHHHHCCCCHHHCCC
PVFYDAQRDPMRNMLVDSSTVAPNNKEGKQWFWNNNRQYSSYVGSISGHTCNIVGMLAKY
CHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCHHHHHHCCCCCHHHHHHHHHHH
MENYKEDPDLQNDINLFLIQVIGVYAKRGFHAMLEVIDVLHDPYVQDIFKGYGVQVNLYS
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEHH
SFKETPELAGFLQHAMNDATTYTQALVNKKHVKEVLQSKSHPLFFSKKIEESGDKKNDHT
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCCC
PKDGNVYGC
CCCCCCCCC
>Mature Secondary Structure
MQNLDEILKKLGEDLEKTSKETANKLSVLSRKVAEDVVRVSDETVQKINEVTKKFSVDTT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
VSTIDTQKILDDFMKNIRFSRFKQIWQAIEETPKSKHILLKSLFLKGLLTHNKPLLEEII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHH
RQIELIPYSSDLEMLGAFSQDKAHPLSPELLEFVQEMLANESEKVLLTILMNAFQSIPEL
HHHHCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
SLDSKTGTLSMKTKKALLPLLIEKADTSIAKSIMSQLTDISFDSVLPAFRPSISDPSYQK
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
TNINVSKYLSLVGDKTDISEFLILTIGLFTSLKIGDKGFLQELSADYLFVRYDDCLHKII
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEHHHHHHHHH
EKLKEKEVIEQLGEEKIQKIMRAVESLQKFNPTSNDPRRFFETRLAQYINGLSHSEKTIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEE
IDSIGEDKEPEDEELRDNTLKACNKILQFFLGDCGRVDTPREMEQKICIFANGYKDTSKF
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCEEEEECCCCCHHHC
NKKEVEFITGVLHHAGAHKGRDRVERDKLTGIKERKFETDSEKVGSDVWNCGGGVMKGCS
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCHHHHCCHHHHCCCCHHHCCC
PVFYDAQRDPMRNMLVDSSTVAPNNKEGKQWFWNNNRQYSSYVGSISGHTCNIVGMLAKY
CHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCHHHHHHCCCCCHHHHHHHHHHH
MENYKEDPDLQNDINLFLIQVIGVYAKRGFHAMLEVIDVLHDPYVQDIFKGYGVQVNLYS
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEHH
SFKETPELAGFLQHAMNDATTYTQALVNKKHVKEVLQSKSHPLFFSKKIEESGDKKNDHT
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCCCC
PKDGNVYGC
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA