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The map label for this gene is 54293396

Identifier: 54293396

GI number: 54293396

Start: 490134

End: 491642

Strand: Direct

Name: 54293396

Synonym: lpl0445

Alternate gene names: NA

Gene position: 490134-491642 (Clockwise)

Preceding gene: 54293388

Following gene: 54293397

Centisome position: 14.65

GC content: 38.7

Gene sequence:

>1509_bases
ATGATTTATGTTTTAATTTGTATTATGCTAGTTTGCGGTTTGGTTGTGTATCAACTCATGCCCAAGCTCCTGCCGTATTC
TACTTCTTTCATCTCTAAAAAACAGGACACCAGTGAATTAACACATGATGGTATTACGAATGTCTTAACACAATTAGGTC
ATCCCAGGTTTGAAGGAGTCTGTTATGGTTTCACTCTCAATTGGGCATTAGCAGTGGCTCAGGGTAAAGAATCCTTTTTC
TACCGCCAATTGCATCATTTACGAACCCACCAGTTTGGTTTGCCTGAAACATTACAACAAATTAAAGAAAAGAAAGAAAG
GAACCAATCATTAAGTAAAGATGAGAAGATCATTGAAACTTTGCCTCAGTTAGGAAAGAAAATCTGTATTGCTCAAGATC
CCTTACAATATAAAGAGAAATACAAAAAGCTGGTATGGCAGCCTGATATTAATTCCATTTTGAAAGCCATAAATGCAGAC
TCTTCCGTTGCAAAGCACATTTTTTATAAGACGCATAGTTTTTTAAATCAGGACGAAGCAACAGAGTATCTTGAATTATT
AAAAAGAACAGGTATCAGAGAGGATGTTGCAGTAATTATCAGTACCGCAGATCACGCCATGGGATTTAAACTGGCGGGTA
ATGTTTGGCGTTTTATTAACATCAATGATTTATACCAACAAGACAAATATAAACCTTACTTTGAATTCTCTTCCCATAAC
CTGGTTAAAGAGTTGTATCGTGTGTGTGCCGAGAACCTTCAGGGAAGTCGATTGACTGTGAATACCGATTTTGTTTCCAT
TCATCCGGAAGAAAAACTGTCAAGTGCACTGCAGAATTTATTCCCTGTGTTTCCAGTCAGAACCAAAACTTCTTATCCCG
AACGATTGGCTTTTTTTTCCATGGCAGCTACTCAGGGTGATATGAATTCTGTAAAAAAGTGTATTCATTCAGGCTGGTCA
ATTTTTTCTCGACAACGGCTAAGTGATGATTCGCCTATCCTTACAGCCATCTATTTAGGAAGAAGAGACGTAGTACGTGC
CATGCTGAGCACTTCTCGACATAGAGTTAACCAAAAGCGTAAAAGCGATTCTTCTACTTTGCTCCACATTGCCTGTCGGT
ATGGTGGTAGTGGTATAGTAGAAGATCTGTTGAATATACGTGGAATTAAAATCGATCCCCAAGACAGCAAGGGGAGAACG
CCGCTCATGTACGCCTGTAAAAAATCTGTAGTGACGGAGGATAGAAAATTATTTAATTTGTTGTTTGCAAAAGGCGCTTC
TCTTTCTATTAAAGATAATGACGGTTTGACCGCACTTGATCATGCCCTTAAAAATGAGCATAACCTTGCAATCCAAATGA
TCGAGGGGAGATTGGAAAAAGAAGCTTGTGCGCAGGAGAACTCAACCTCTCGTCGATTTAAATTTTCTGAGACAAAAGGT
ACTTTGTTCCAGAGAGGAGTGAAAACTATTTCTTATCCATCACAGCAACCTGGTTTTGGTATGAAATAG

Upstream 100 bases:

>100_bases
TGGAGGATCTTGATGCTAATCGAATATCTCATCCCCTCGACTTGTATGATGGTTTAATTTTATACTCAAGTCATTATGGA
TAGCATCAGGTTCAAGGGAT

Downstream 100 bases:

>100_bases
GAGAATAAAATTTGCCTTTTTAGCACCTGAAGCTTTTTGTCTCGATTTTGGGGTTTTGCGCCCTATTAGTAAACAAACCA
CTTAATGTGCATTAGAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MIYVLICIMLVCGLVVYQLMPKLLPYSTSFISKKQDTSELTHDGITNVLTQLGHPRFEGVCYGFTLNWALAVAQGKESFF
YRQLHHLRTHQFGLPETLQQIKEKKERNQSLSKDEKIIETLPQLGKKICIAQDPLQYKEKYKKLVWQPDINSILKAINAD
SSVAKHIFYKTHSFLNQDEATEYLELLKRTGIREDVAVIISTADHAMGFKLAGNVWRFININDLYQQDKYKPYFEFSSHN
LVKELYRVCAENLQGSRLTVNTDFVSIHPEEKLSSALQNLFPVFPVRTKTSYPERLAFFSMAATQGDMNSVKKCIHSGWS
IFSRQRLSDDSPILTAIYLGRRDVVRAMLSTSRHRVNQKRKSDSSTLLHIACRYGGSGIVEDLLNIRGIKIDPQDSKGRT
PLMYACKKSVVTEDRKLFNLLFAKGASLSIKDNDGLTALDHALKNEHNLAIQMIEGRLEKEACAQENSTSRRFKFSETKG
TLFQRGVKTISYPSQQPGFGMK

Sequences:

>Translated_502_residues
MIYVLICIMLVCGLVVYQLMPKLLPYSTSFISKKQDTSELTHDGITNVLTQLGHPRFEGVCYGFTLNWALAVAQGKESFF
YRQLHHLRTHQFGLPETLQQIKEKKERNQSLSKDEKIIETLPQLGKKICIAQDPLQYKEKYKKLVWQPDINSILKAINAD
SSVAKHIFYKTHSFLNQDEATEYLELLKRTGIREDVAVIISTADHAMGFKLAGNVWRFININDLYQQDKYKPYFEFSSHN
LVKELYRVCAENLQGSRLTVNTDFVSIHPEEKLSSALQNLFPVFPVRTKTSYPERLAFFSMAATQGDMNSVKKCIHSGWS
IFSRQRLSDDSPILTAIYLGRRDVVRAMLSTSRHRVNQKRKSDSSTLLHIACRYGGSGIVEDLLNIRGIKIDPQDSKGRT
PLMYACKKSVVTEDRKLFNLLFAKGASLSIKDNDGLTALDHALKNEHNLAIQMIEGRLEKEACAQENSTSRRFKFSETKG
TLFQRGVKTISYPSQQPGFGMK
>Mature_502_residues
MIYVLICIMLVCGLVVYQLMPKLLPYSTSFISKKQDTSELTHDGITNVLTQLGHPRFEGVCYGFTLNWALAVAQGKESFF
YRQLHHLRTHQFGLPETLQQIKEKKERNQSLSKDEKIIETLPQLGKKICIAQDPLQYKEKYKKLVWQPDINSILKAINAD
SSVAKHIFYKTHSFLNQDEATEYLELLKRTGIREDVAVIISTADHAMGFKLAGNVWRFININDLYQQDKYKPYFEFSSHN
LVKELYRVCAENLQGSRLTVNTDFVSIHPEEKLSSALQNLFPVFPVRTKTSYPERLAFFSMAATQGDMNSVKKCIHSGWS
IFSRQRLSDDSPILTAIYLGRRDVVRAMLSTSRHRVNQKRKSDSSTLLHIACRYGGSGIVEDLLNIRGIKIDPQDSKGRT
PLMYACKKSVVTEDRKLFNLLFAKGASLSIKDNDGLTALDHALKNEHNLAIQMIEGRLEKEACAQENSTSRRFKFSETKG
TLFQRGVKTISYPSQQPGFGMK

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57240; Mature: 57240

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYVLICIMLVCGLVVYQLMPKLLPYSTSFISKKQDTSELTHDGITNVLTQLGHPRFEGV
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCE
CYGFTLNWALAVAQGKESFFYRQLHHLRTHQFGLPETLQQIKEKKERNQSLSKDEKIIET
EEEEEEEHHHEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
LPQLGKKICIAQDPLQYKEKYKKLVWQPDINSILKAINADSSVAKHIFYKTHSFLNQDEA
HHHHHHHEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHH
TEYLELLKRTGIREDVAVIISTADHAMGFKLAGNVWRFININDLYQQDKYKPYFEFSSHN
HHHHHHHHHCCCCHHHEEEEECCHHHHCEEECCCEEEEEECHHHHHHCCCCCCEECCCCH
LVKELYRVCAENLQGSRLTVNTDFVSIHPEEKLSSALQNLFPVFPVRTKTSYPERLAFFS
HHHHHHHHHHHCCCCCEEEEECCEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
MAATQGDMNSVKKCIHSGWSIFSRQRLSDDSPILTAIYLGRRDVVRAMLSTSRHRVNQKR
HHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHH
KSDSSTLLHIACRYGGSGIVEDLLNIRGIKIDPQDSKGRTPLMYACKKSVVTEDRKLFNL
CCCCCCEEEEEECCCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LFAKGASLSIKDNDGLTALDHALKNEHNLAIQMIEGRLEKEACAQENSTSRRFKFSETKG
HHHCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHH
TLFQRGVKTISYPSQQPGFGMK
HHHHHCCHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIYVLICIMLVCGLVVYQLMPKLLPYSTSFISKKQDTSELTHDGITNVLTQLGHPRFEGV
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCE
CYGFTLNWALAVAQGKESFFYRQLHHLRTHQFGLPETLQQIKEKKERNQSLSKDEKIIET
EEEEEEEHHHEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
LPQLGKKICIAQDPLQYKEKYKKLVWQPDINSILKAINADSSVAKHIFYKTHSFLNQDEA
HHHHHHHEECCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHH
TEYLELLKRTGIREDVAVIISTADHAMGFKLAGNVWRFININDLYQQDKYKPYFEFSSHN
HHHHHHHHHCCCCHHHEEEEECCHHHHCEEECCCEEEEEECHHHHHHCCCCCCEECCCCH
LVKELYRVCAENLQGSRLTVNTDFVSIHPEEKLSSALQNLFPVFPVRTKTSYPERLAFFS
HHHHHHHHHHHCCCCCEEEEECCEEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
MAATQGDMNSVKKCIHSGWSIFSRQRLSDDSPILTAIYLGRRDVVRAMLSTSRHRVNQKR
HHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHH
KSDSSTLLHIACRYGGSGIVEDLLNIRGIKIDPQDSKGRTPLMYACKKSVVTEDRKLFNL
CCCCCCEEEEEECCCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LFAKGASLSIKDNDGLTALDHALKNEHNLAIQMIEGRLEKEACAQENSTSRRFKFSETKG
HHHCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHH
TLFQRGVKTISYPSQQPGFGMK
HHHHHCCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA