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The map label for this gene is yfgD [H]

Identifier: 54293254

GI number: 54293254

Start: 345406

End: 345747

Strand: Direct

Name: yfgD [H]

Synonym: lpl0302

Alternate gene names: 54293254

Gene position: 345406-345747 (Clockwise)

Preceding gene: 54293253

Following gene: 54293257

Centisome position: 10.32

GC content: 37.13

Gene sequence:

>342_bases
ATGGAAAAAATTACTATTTATCATAATCCAAGATGCTCAAAATCTAGACAAACATTGGAAATACTGCAAAACAAAGGTTT
TGAACCCATTATCATTGAATATCTTAAAACTCCTCTTGATCTGGAACAATTGAAAAGATTACGGACTCACCTGGCTCTTG
AAGATTTGGTGCGTACGAATGAAAATGTTTTTAAAGAATTGGGTCTGTCTCTGGCTAATGAGGCGCAAGTTTTAGAAGCT
ATGGTAATAGAACCTATATTAATGCAACGCCCAATTGTCACATTTAAAGGTAAGGCTGTTATCGGGCGTCCGCCTGAGAA
AGTCCTGGAGCTGTTTGATTAG

Upstream 100 bases:

>100_bases
AGTTTAAAACCCCTGCTTGTGTTTTTGCAAAGCGAGCAGGATAAAAGCGAAAGAAAGTGTTATAGTTTTAATTTATTTCG
GCAAAGAATTTAAAAAGAAC

Downstream 100 bases:

>100_bases
TCTTTATTGTACGATAATATAAATTTAATCCTGATACCATGACTAATCTCACTGTCATGGTAAGGAATAAAAGCATTTGC
AAAACTTCAGAGAGAATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MEKITIYHNPRCSKSRQTLEILQNKGFEPIIIEYLKTPLDLEQLKRLRTHLALEDLVRTNENVFKELGLSLANEAQVLEA
MVIEPILMQRPIVTFKGKAVIGRPPEKVLELFD

Sequences:

>Translated_113_residues
MEKITIYHNPRCSKSRQTLEILQNKGFEPIIIEYLKTPLDLEQLKRLRTHLALEDLVRTNENVFKELGLSLANEAQVLEA
MVIEPILMQRPIVTFKGKAVIGRPPEKVLELFD
>Mature_113_residues
MEKITIYHNPRCSKSRQTLEILQNKGFEPIIIEYLKTPLDLEQLKRLRTHLALEDLVRTNENVFKELGLSLANEAQVLEA
MVIEPILMQRPIVTFKGKAVIGRPPEKVLELFD

Specific function: Unknown

COG id: COG1393

COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArsC family [H]

Homologues:

Organism=Escherichia coli, GI1788841, Length=117, Percent_Identity=49.5726495726496, Blast_Score=107, Evalue=3e-25,
Organism=Escherichia coli, GI1789918, Length=116, Percent_Identity=40.5172413793103, Blast_Score=82, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006659
- InterPro:   IPR006660
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF03960 ArsC [H]

EC number: NA

Molecular weight: Translated: 13067; Mature: 13067

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKITIYHNPRCSKSRQTLEILQNKGFEPIIIEYLKTPLDLEQLKRLRTHLALEDLVRTN
CCEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
ENVFKELGLSLANEAQVLEAMVIEPILMQRPIVTFKGKAVIGRPPEKVLELFD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCEEECCCHHHHHHHCC
>Mature Secondary Structure
MEKITIYHNPRCSKSRQTLEILQNKGFEPIIIEYLKTPLDLEQLKRLRTHLALEDLVRTN
CCEEEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
ENVFKELGLSLANEAQVLEAMVIEPILMQRPIVTFKGKAVIGRPPEKVLELFD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 10493123 [H]