| Definition | Mycoplasma hyopneumoniae 232, complete genome. |
|---|---|
| Accession | NC_006360 |
| Length | 892,758 |
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The map label for this gene is 54020542
Identifier: 54020542
GI number: 54020542
Start: 602210
End: 604849
Strand: Reverse
Name: 54020542
Synonym: mhp487
Alternate gene names: NA
Gene position: 604849-602210 (Counterclockwise)
Preceding gene: 54020543
Following gene: 54020541
Centisome position: 67.75
GC content: 32.58
Gene sequence:
>2640_bases ATGAACAAAACGAAAACTTTAAGATTTTATTTAACGGAAATTTGTGATGAATTTCACAAGGAAAAAGATTGCTATTACCG TCTTAAATTTGCAAAAGAAACCGTTGGTATTTTTAACTCACTTACTGATGTTTTTCTTAAGATTGAAAGCCTGAAAACTC CAGTGCGACTTTGAGTTTTACGTGGGAATAAATTTGGATCGGTAATCTCTTTTCCTTTAGCGATTAACTTTAGATCGCTT AATCAGGCTCAGCGCGAAGAATTTTTAGCTAAAACATTTTCCGATTTTGATAATTCAGCTTCCCAAACAACTAGTGAAAA AACAAAAAAATCCGATAAAAATTTAAAAAATCCTTTAAAAAATAGTAAGAATCAAAAACAGGCAACTGAATTAATCATTA CCGAGGATGAAAAAACCATCGATGAAATTCTTTATGCGATCAAACAAAACGCTGCCGATCAAAAAATTGAATGTGCTGTC TGTGAAAAAGATAATGAAACTGAAGCCCTAAGTCATCAATGTCCTTGTCATCTTGTTGAGCTCGAAATTTTAGAAGATAG TCTAGAAAATAAAATACCTGAATTAGTCAGTGAAAATGAAAAAATCCTTTTAGATGCGGCTAGTTTTCCCCAAGAAGGCA AAAAATCTGATGAAAATTTAGAAGTAGAAAAACTTGAAAATCAAGATGATAATTTAATCTTTAACCAACAAATTTCCGAT CAATTTGACGAAAAAATACTTGAAAATGTGAGCTCTACATCCGAAGTTTTGATTTTAAAAAGCCAAGAAAAAGAATTTGA AGTCGGTATTGAAAAAAAAGTTTTAGACCATAAGGAATATGGTATAATTAATAGTCCGGATCTCGAGGTCGCTGTAGAAA AAGAAGCCAATATCACCTATCAGCATTCTGAATTTTGCGACTCAGTCTCTTCGTTTAGCTCTTTCAAAACTTCATGTTCA GCTTGTTCTCATAATGCAACTTGCCCTTGATGTCAGAAATACCGCACTTATTTATTAGAAGCAAAAAATTGTCCAGCTTG TATTTTAAAATTTAAAGAGCAAAACTTTGATCTTGATACTAAATTATTAGAGCTTCGTTCTAGTAATTTAGTATCAAAAA AAGAAAATTTAGTAAAAAAAGAATCACAGATCTGCAAGGCTTGCAGTCATAATGCTTTATGTTCTTGATGTCAGCGCTAC CGTACCTATTTATTAGAAGCCAGAAATTGTCCTAAATGTTTAGAAACATTCAAGTTTAAAAATATTGATATTAACAGGAA GATTTTTGAGCTTTCCCATCCTTCTTATCCTTATATTTTATTAAAAAACCCTTATTTAAGCAATTGTTATGCATGTAATC ACAATGCAACTTGCCCTTGATGTCAGAAATATCGCACTTATTTATTGGAAGCCAGAAATTGTCCAGCTTGTCTTGAGAAA TTTAAAGCCAAAAATTTCGATGTTGATGCCAAATTATTAGAGCTCCGTTATGGTTCATATACAAAACACCTTGAAAATTT AGGTGCAAAAATTTCTTGTCAGGCATGCAATCACAATGCAAATTGTTTATGATGTCAGCGATATGCAACTTATTTATTAG AAGCTAAAAATTGTCCAGCTTGTCTTGAAAGATTTAGGCTCCAAAATTTTGATATTGAGAAAAAATTAAGTGAATTACGT GTAAATGATTATCAAAATTTATATTCTTTAATTTGACAGCAAACTTATAATTCTCCTTGTCCGACATGCAATCATAATTT TTTCTGTCCAAAATGCAGCAAATTGCGCGCTTTTTATAAAGAAGCTAGAAAATGCCTTGCTTGCCAGGAACTATTAAAAC AAAGAAATATTAATATTGAAGAGAAAATTTACCAACTTTCTTATTATCCATATTTTGACTCCCGCGCGCTTGTTAGATAT CAGTTTGGTCAGGGCCACAAACTACCTTATAATGAAAATTGTGCCTCCTGTGTTCATATTTATTTCTGTAAATTCTGCCT TAAATACCGAGCTTTTTTACTTGAAGCAAAAAATTGTCCAGCTTGTCGTTACCTTTTTGCCAAGAGAAATCTTTCAATTG ACTATCTTCTAAAAATTATTAATTATGAAGTCCATGATGATAATTTTCACCATATAAGTCCCCTTTTAGTTCTAGCTCAT GGCAAAAAAATTGTCCATGAAGAAATTCCTCAGATTGTCGAAATCGTTCTTGATTATTCCTGAATTAAAATTTATCCGCA GTTTTTAGCGCTAGGAAATTACCCACTTAATAAATTCCCAGCAATTATCCCATTATTTCAAGGGATCGTTTATCAAGCAT TACTTGATCAGAACTGAGATGAACATAATGCGATGGTCGATGAGGAATTATTCAATACCAAACGAGGTTTTGGCGGATAT AATCTTCAAGGTGGTCTAAGCGTTGGCCTTGGCGATCTCAGTGTCGATGAGGCAACTAGGGTAATAGCAGCTTCAACTTC AAGTGTTGATGAAGATGAAGAAATTATTATTGTTGCTACCGAAAAATCAACAATTTGAGGCTTGCCTTCCTATGTTTTAT GGTTCGTCCTATTTGCTGTGATTGCTGTGCTTCTTGTGGTTGTGATTATGTTTGTTTTATATGGGGCAGGTATAATTTAG
Upstream 100 bases:
>100_bases AAGCAAAACGTAAAATTTTATTTTTTAGTCATATAATTTCAATTTTATTCTATAATTTAAATTATTTTAAGTTTATAATC AAAAGAAGTCGCTAAACAAA
Downstream 100 bases:
>100_bases TACCAATTTTAAAAATTTTGTAAAAAAAACAAAATTTTTTCTACTAATCTTTGTTTTTTATAAAAAATTTTATTTTTTGC AAAGATTAGTAGAATTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 879; Mature: 879
Protein sequence:
>879_residues MNKTKTLRFYLTEICDEFHKEKDCYYRLKFAKETVGIFNSLTDVFLKIESLKTPVRLWVLRGNKFGSVISFPLAINFRSL NQAQREEFLAKTFSDFDNSASQTTSEKTKKSDKNLKNPLKNSKNQKQATELIITEDEKTIDEILYAIKQNAADQKIECAV CEKDNETEALSHQCPCHLVELEILEDSLENKIPELVSENEKILLDAASFPQEGKKSDENLEVEKLENQDDNLIFNQQISD QFDEKILENVSSTSEVLILKSQEKEFEVGIEKKVLDHKEYGIINSPDLEVAVEKEANITYQHSEFCDSVSSFSSFKTSCS ACSHNATCPWCQKYRTYLLEAKNCPACILKFKEQNFDLDTKLLELRSSNLVSKKENLVKKESQICKACSHNALCSWCQRY RTYLLEARNCPKCLETFKFKNIDINRKIFELSHPSYPYILLKNPYLSNCYACNHNATCPWCQKYRTYLLEARNCPACLEK FKAKNFDVDAKLLELRYGSYTKHLENLGAKISCQACNHNANCLWCQRYATYLLEAKNCPACLERFRLQNFDIEKKLSELR VNDYQNLYSLIWQQTYNSPCPTCNHNFFCPKCSKLRAFYKEARKCLACQELLKQRNINIEEKIYQLSYYPYFDSRALVRY QFGQGHKLPYNENCASCVHIYFCKFCLKYRAFLLEAKNCPACRYLFAKRNLSIDYLLKIINYEVHDDNFHHISPLLVLAH GKKIVHEEIPQIVEIVLDYSWIKIYPQFLALGNYPLNKFPAIIPLFQGIVYQALLDQNWDEHNAMVDEELFNTKRGFGGY NLQGGLSVGLGDLSVDEATRVIAASTSSVDEDEEIIIVATEKSTIWGLPSYVLWFVLFAVIAVLLVVVIMFVLYGAGII
Sequences:
>Translated_879_residues MNKTKTLRFYLTEICDEFHKEKDCYYRLKFAKETVGIFNSLTDVFLKIESLKTPVRL*VLRGNKFGSVISFPLAINFRSL NQAQREEFLAKTFSDFDNSASQTTSEKTKKSDKNLKNPLKNSKNQKQATELIITEDEKTIDEILYAIKQNAADQKIECAV CEKDNETEALSHQCPCHLVELEILEDSLENKIPELVSENEKILLDAASFPQEGKKSDENLEVEKLENQDDNLIFNQQISD QFDEKILENVSSTSEVLILKSQEKEFEVGIEKKVLDHKEYGIINSPDLEVAVEKEANITYQHSEFCDSVSSFSSFKTSCS ACSHNATCP*CQKYRTYLLEAKNCPACILKFKEQNFDLDTKLLELRSSNLVSKKENLVKKESQICKACSHNALCS*CQRY RTYLLEARNCPKCLETFKFKNIDINRKIFELSHPSYPYILLKNPYLSNCYACNHNATCP*CQKYRTYLLEARNCPACLEK FKAKNFDVDAKLLELRYGSYTKHLENLGAKISCQACNHNANCL*CQRYATYLLEAKNCPACLERFRLQNFDIEKKLSELR VNDYQNLYSLI*QQTYNSPCPTCNHNFFCPKCSKLRAFYKEARKCLACQELLKQRNINIEEKIYQLSYYPYFDSRALVRY QFGQGHKLPYNENCASCVHIYFCKFCLKYRAFLLEAKNCPACRYLFAKRNLSIDYLLKIINYEVHDDNFHHISPLLVLAH GKKIVHEEIPQIVEIVLDYS*IKIYPQFLALGNYPLNKFPAIIPLFQGIVYQALLDQN*DEHNAMVDEELFNTKRGFGGY NLQGGLSVGLGDLSVDEATRVIAASTSSVDEDEEIIIVATEKSTI*GLPSYVLWFVLFAVIAVLLVVVIMFVLYGAGII >Mature_879_residues MNKTKTLRFYLTEICDEFHKEKDCYYRLKFAKETVGIFNSLTDVFLKIESLKTPVRL*VLRGNKFGSVISFPLAINFRSL NQAQREEFLAKTFSDFDNSASQTTSEKTKKSDKNLKNPLKNSKNQKQATELIITEDEKTIDEILYAIKQNAADQKIECAV CEKDNETEALSHQCPCHLVELEILEDSLENKIPELVSENEKILLDAASFPQEGKKSDENLEVEKLENQDDNLIFNQQISD QFDEKILENVSSTSEVLILKSQEKEFEVGIEKKVLDHKEYGIINSPDLEVAVEKEANITYQHSEFCDSVSSFSSFKTSCS ACSHNATCP*CQKYRTYLLEAKNCPACILKFKEQNFDLDTKLLELRSSNLVSKKENLVKKESQICKACSHNALCS*CQRY RTYLLEARNCPKCLETFKFKNIDINRKIFELSHPSYPYILLKNPYLSNCYACNHNATCP*CQKYRTYLLEARNCPACLEK FKAKNFDVDAKLLELRYGSYTKHLENLGAKISCQACNHNANCL*CQRYATYLLEAKNCPACLERFRLQNFDIEKKLSELR VNDYQNLYSLI*QQTYNSPCPTCNHNFFCPKCSKLRAFYKEARKCLACQELLKQRNINIEEKIYQLSYYPYFDSRALVRY QFGQGHKLPYNENCASCVHIYFCKFCLKYRAFLLEAKNCPACRYLFAKRNLSIDYLLKIINYEVHDDNFHHISPLLVLAH GKKIVHEEIPQIVEIVLDYS*IKIYPQFLALGNYPLNKFPAIIPLFQGIVYQALLDQN*DEHNAMVDEELFNTKRGFGGY NLQGGLSVGLGDLSVDEATRVIAASTSSVDEDEEIIIVATEKSTI*GLPSYVLWFVLFAVIAVLLVVVIMFVLYGAGII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 99803; Mature: 99803
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTKTLRFYLTEICDEFHKEKDCYYRLKFAKETVGIFNSLTDVFLKIESLKTPVRLVLR CCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE GNKFGSVISFPLAINFRSLNQAQREEFLAKTFSDFDNSASQTTSEKTKKSDKNLKNPLKN CCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC SKNQKQATELIITEDEKTIDEILYAIKQNAADQKIECAVCEKDNETEALSHQCPCHLVEL CCCHHHHHEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHCCCCCEEEHH EILEDSLENKIPELVSENEKILLDAASFPQEGKKSDENLEVEKLENQDDNLIFNQQISDQ HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCEEECCHHHHH FDEKILENVSSTSEVLILKSQEKEFEVGIEKKVLDHKEYGIINSPDLEVAVEKEANITYQ HHHHHHHHCCCCCEEEEEECCCCHHHCCHHHHHHCHHHCCCCCCCCCEEEEECCCCCEEE HSEFCDSVSSFSSFKTSCSACSHNATCPCQKYRTYLLEAKNCPACILKFKEQNFDLDTKL HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHEEECCCCCCHHHHH LELRSSNLVSKKENLVKKESQICKACSHNALCSCQRYRTYLLEARNCPKCLETFKFKNID HHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC INRKIFELSHPSYPYILLKNPYLSNCYACNHNATCPCQKYRTYLLEARNCPACLEKFKAK CCCEEEEECCCCCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCC NFDVDAKLLELRYGSYTKHLENLGAKISCQACNHNANCLCQRYATYLLEAKNCPACLERF CCCCCHHHHHHHCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHH RLQNFDIEKKLSELRVNDYQNLYSLIQQTYNSPCPTCNHNFFCPKCSKLRAFYKEARKCL HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ACQELLKQRNINIEEKIYQLSYYPYFDSRALVRYQFGQGHKLPYNENCASCVHIYFCKFC HHHHHHHHCCCCHHHHHHEEEECCEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH LKYRAFLLEAKNCPACRYLFAKRNLSIDYLLKIINYEVHDDNFHHISPLLVLAHGKKIVH HHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCEECCCCCCHHHHHHHHHCCCHHHH EEIPQIVEIVLDYSIKIYPQFLALGNYPLNKFPAIIPLFQGIVYQALLDQNDEHNAMVDE HHHHHHHHHHHHCCCEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH ELFNTKRGFGGYNLQGGLSVGLGDLSVDEATRVIAASTSSVDEDEEIIIVATEKSTIGLP HHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHEEEECCCCCCCCCCEEEEEECCCCCCCH SYVLWFVLFAVIAVLLVVVIMFVLYGAGII HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNKTKTLRFYLTEICDEFHKEKDCYYRLKFAKETVGIFNSLTDVFLKIESLKTPVRLVLR CCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE GNKFGSVISFPLAINFRSLNQAQREEFLAKTFSDFDNSASQTTSEKTKKSDKNLKNPLKN CCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC SKNQKQATELIITEDEKTIDEILYAIKQNAADQKIECAVCEKDNETEALSHQCPCHLVEL CCCHHHHHEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHCCCCCEEEHH EILEDSLENKIPELVSENEKILLDAASFPQEGKKSDENLEVEKLENQDDNLIFNQQISDQ HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCEEECCHHHHH FDEKILENVSSTSEVLILKSQEKEFEVGIEKKVLDHKEYGIINSPDLEVAVEKEANITYQ HHHHHHHHCCCCCEEEEEECCCCHHHCCHHHHHHCHHHCCCCCCCCCEEEEECCCCCEEE HSEFCDSVSSFSSFKTSCSACSHNATCPCQKYRTYLLEAKNCPACILKFKEQNFDLDTKL HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHEEECCCCCCHHHHH LELRSSNLVSKKENLVKKESQICKACSHNALCSCQRYRTYLLEARNCPKCLETFKFKNID HHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC INRKIFELSHPSYPYILLKNPYLSNCYACNHNATCPCQKYRTYLLEARNCPACLEKFKAK CCCEEEEECCCCCCEEEECCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCC NFDVDAKLLELRYGSYTKHLENLGAKISCQACNHNANCLCQRYATYLLEAKNCPACLERF CCCCCHHHHHHHCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHH RLQNFDIEKKLSELRVNDYQNLYSLIQQTYNSPCPTCNHNFFCPKCSKLRAFYKEARKCL HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ACQELLKQRNINIEEKIYQLSYYPYFDSRALVRYQFGQGHKLPYNENCASCVHIYFCKFC HHHHHHHHCCCCHHHHHHEEEECCEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH LKYRAFLLEAKNCPACRYLFAKRNLSIDYLLKIINYEVHDDNFHHISPLLVLAHGKKIVH HHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCEECCCCCCHHHHHHHHHCCCHHHH EEIPQIVEIVLDYSIKIYPQFLALGNYPLNKFPAIIPLFQGIVYQALLDQNDEHNAMVDE HHHHHHHHHHHHCCCEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH ELFNTKRGFGGYNLQGGLSVGLGDLSVDEATRVIAASTSSVDEDEEIIIVATEKSTIGLP HHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHEEEECCCCCCCCCCEEEEEECCCCCCCH SYVLWFVLFAVIAVLLVVVIMFVLYGAGII HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA