Definition Mycoplasma hyopneumoniae 232, complete genome.
Accession NC_006360
Length 892,758

Click here to switch to the map view.

The map label for this gene is 54020536

Identifier: 54020536

GI number: 54020536

Start: 594902

End: 595768

Strand: Reverse

Name: 54020536

Synonym: mhp480

Alternate gene names: NA

Gene position: 595768-594902 (Counterclockwise)

Preceding gene: 54020537

Following gene: 54020535

Centisome position: 66.73

GC content: 27.34

Gene sequence:

>867_bases
ATGAATATTAATGAAATAAAGGAAAAACGGGCTAACTTTGCAAAAATTTACGATTTAGTTTCACTAAATCGGAATATTTC
TTTGATAAAAATTAACCTTCTTTTACGCACAATTCGCAATGTTTATGAATTTTTTCTAATTGGTCAGTACTTTTTGGTAA
ATTTTAGTTATCAAAGATCGCTTAGCACTAAATTATCGTTAGTTACTAGAAAAGCATTGATTCGTCAAAATGTTAGTCTC
TGAATTTATCCTTCTTCTGATGAGAAATATACCCAGAACTTTTTTGACCAAATTGAGGCAAAAATTCTTGAAAACTATAA
AGAAAAAGATTTTATTATTACTTTAGGCGATCGGGCACTTAATTTTGCTAACAAAAATAAGATGCAAATTCTTGAAAGTT
TTCAAAATTTGGATAATACTTTTAAAAATTCAACGAAAATTGGTGAAATTATCAATTATGGAATCAAAAATCGACAATTT
TCAACTGTAAAAATGGCAGTTTATTCAAATAAAATCACCGATTTTATCGCAACAATTTTCCCTTTAAACCATTTTGAATT
CAAAATGGAAACAAATCAGGAAGTACTTGAAAAAATTGAAAAAAATCTAGAGAAAGTAAGATTTTTTCCAAATTTTGAAG
AATTTTATCAAAGTCAAATTCTTAGTTATTTTGTAACTTCAGTCCAAATTTTATTATTAGAGTCCCAATTTATTGTCTAT
AAAAATAAGCTAATCCATGAAAATACGCTTTTAAAAGAGATTGAAGAAAAAATGCGTCATCTGCGAACATCAATTCTCAA
AATCGAGCGGGAACTAGAAATTGAAGAGCTCAATGTCATTAAAAGAAAGCCGAAAGGAGTTTTCTAA

Upstream 100 bases:

>100_bases
AAAAGTGATTTTTAGTGAAGTTTCTTTAGTCTCAAGTCTTGAAAATATCCAAAATCAGCAAAATAAGCCAAAAAAAGCCT
AATTTTGAAAGTTTTAAATT

Downstream 100 bases:

>100_bases
ATGGAGGCAAAACTTTGAAATTTTCGGATTCTAACCCCCGAAAATAAAATTATTACTTTAAAAAATTGCAAAATTTCCCT
TAATATTGAGCAAGAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MNINEIKEKRANFAKIYDLVSLNRNISLIKINLLLRTIRNVYEFFLIGQYFLVNFSYQRSLSTKLSLVTRKALIRQNVSL
WIYPSSDEKYTQNFFDQIEAKILENYKEKDFIITLGDRALNFANKNKMQILESFQNLDNTFKNSTKIGEIINYGIKNRQF
STVKMAVYSNKITDFIATIFPLNHFEFKMETNQEVLEKIEKNLEKVRFFPNFEEFYQSQILSYFVTSVQILLLESQFIVY
KNKLIHENTLLKEIEEKMRHLRTSILKIERELEIEELNVIKRKPKGVF

Sequences:

>Translated_288_residues
MNINEIKEKRANFAKIYDLVSLNRNISLIKINLLLRTIRNVYEFFLIGQYFLVNFSYQRSLSTKLSLVTRKALIRQNVSL
*IYPSSDEKYTQNFFDQIEAKILENYKEKDFIITLGDRALNFANKNKMQILESFQNLDNTFKNSTKIGEIINYGIKNRQF
STVKMAVYSNKITDFIATIFPLNHFEFKMETNQEVLEKIEKNLEKVRFFPNFEEFYQSQILSYFVTSVQILLLESQFIVY
KNKLIHENTLLKEIEEKMRHLRTSILKIERELEIEELNVIKRKPKGVF
>Mature_288_residues
MNINEIKEKRANFAKIYDLVSLNRNISLIKINLLLRTIRNVYEFFLIGQYFLVNFSYQRSLSTKLSLVTRKALIRQNVSL
*IYPSSDEKYTQNFFDQIEAKILENYKEKDFIITLGDRALNFANKNKMQILESFQNLDNTFKNSTKIGEIINYGIKNRQF
STVKMAVYSNKITDFIATIFPLNHFEFKMETNQEVLEKIEKNLEKVRFFPNFEEFYQSQILSYFVTSVQILLLESQFIVY
KNKLIHENTLLKEIEEKMRHLRTSILKIERELEIEELNVIKRKPKGVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34208; Mature: 34208

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINEIKEKRANFAKIYDLVSLNRNISLIKINLLLRTIRNVYEFFLIGQYFLVNFSYQRS
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHH
LSTKLSLVTRKALIRQNVSLIYPSSDEKYTQNFFDQIEAKILENYKEKDFIITLGDRALN
HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
FANKNKMQILESFQNLDNTFKNSTKIGEIINYGIKNRQFSTVKMAVYSNKITDFIATIFP
HCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHEEHHHHHHHHHHHHHHHHC
LNHFEFKMETNQEVLEKIEKNLEKVRFFPNFEEFYQSQILSYFVTSVQILLLESQFIVYK
CCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
NKLIHENTLLKEIEEKMRHLRTSILKIERELEIEELNVIKRKPKGVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNINEIKEKRANFAKIYDLVSLNRNISLIKINLLLRTIRNVYEFFLIGQYFLVNFSYQRS
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHH
LSTKLSLVTRKALIRQNVSLIYPSSDEKYTQNFFDQIEAKILENYKEKDFIITLGDRALN
HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
FANKNKMQILESFQNLDNTFKNSTKIGEIINYGIKNRQFSTVKMAVYSNKITDFIATIFP
HCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHEEHHHHHHHHHHHHHHHHC
LNHFEFKMETNQEVLEKIEKNLEKVRFFPNFEEFYQSQILSYFVTSVQILLLESQFIVYK
CCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
NKLIHENTLLKEIEEKMRHLRTSILKIERELEIEELNVIKRKPKGVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]