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The map label for this gene is sgaU

Identifier: 54020508

GI number: 54020508

Start: 519520

End: 520449

Strand: Reverse

Name: sgaU

Synonym: mhp440

Alternate gene names: 54020508

Gene position: 520449-519520 (Counterclockwise)

Preceding gene: 54020509

Following gene: 54020507

Centisome position: 58.3

GC content: 31.18

Gene sequence:

>930_bases
ATGCAAAAGACCCAGAGGCAAAAGCAAAGGAATTCAAAGATGAGTTTAAAAAATACTGAACCTAATTTTTTTGTCGGCAT
CTATGAAAAGGCAATTGATAAACGTTTTTCTTTGATAGATAAAATTAAAATCGCCAAACAAGCCGGTTTTAATTTTATCG
AAATGTCAGTTGATGAAACAGATGAGTTTGCTTCTCGCCTTGATTTTTCCAATGATGAGATTAAAGTAATTTTAGATACT
CTAATTGAATATGATTTTTATATAAATTCAATGTGTTTGTCCTTACATCGAAAGTTTCCTTTTGGTTCTGCAAGTGAAAA
AATCCGCGAAAAAGCGCTAAAAATTATGGAAAAAGCCTTAATTTTAGCAAAAAAACTTAAAATTTCGATTATTCAACTTG
CCGCTTATGATATTTATTATGAGGAACCCCATCCAAATTCGGAAATTTTTTTCATCAAAACAATGAAAAAAATTGTTGCA
TTAGCAAAAAAATATAGTATAATAATAGCATTTGAGTCAATGGATAGAAAATTCGCCGGGACAATCACAAGACTTTTATA
TTTGCAAAAGTCAGTCGGCGGCGGAGTATTTTTATATCCCGATCTTGGAAATTTATCGCGTTTTTCCAATGATCTTGAAG
CCGAGATTAAGCTCGGAAAAAGTGAAATTGTTGCTTTTCATTTTAAAGATACCTTGCCTGATACCTTCAAAAATCTTGAT
TTTGGCCAAGGTGATGTTGATTTTGTTTCTGCTTTTAAATACATTATAAATGCAGAAATTAATGTCCCATTTGTAATTGA
AATGTGACATAAACCAGAAAATTTTGACCAAAATGCCGAATTTGAGCAAAATTTTCAAAAACAGGTTGGGATAATTCGTT
CAGCCCGTGAATTTTTTCAAGAAAAGTTGAGGTTAGCCAATGAAAATTAA

Upstream 100 bases:

>100_bases
GGTTTTAAGGTTACAATCACCGGCGGGGTTGAAGTTGAGGATATTAAATTATTTAAGGATATCCCAATTTATATTTTTAT
CGCCGGCCGTTCAATTCGCG

Downstream 100 bases:

>100_bases
AGACCGTAACGAACTTGAAGAACTCCAAAAAGCCGTTCTAGAAGCAAATCTTTTACTTTATAAGTCCAAATTAGCACTTC
ATACCTGGGGAAATGTCTCA

Product: L-xylulose 5-phosphate 3-epimerase

Products: NA

Alternate protein names: L-ascorbate utilization protein E; L-xylulose-5-phosphate 3-epimerase [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MQKTQRQKQRNSKMSLKNTEPNFFVGIYEKAIDKRFSLIDKIKIAKQAGFNFIEMSVDETDEFASRLDFSNDEIKVILDT
LIEYDFYINSMCLSLHRKFPFGSASEKIREKALKIMEKALILAKKLKISIIQLAAYDIYYEEPHPNSEIFFIKTMKKIVA
LAKKYSIIIAFESMDRKFAGTITRLLYLQKSVGGGVFLYPDLGNLSRFSNDLEAEIKLGKSEIVAFHFKDTLPDTFKNLD
FGQGDVDFVSAFKYIINAEINVPFVIEMWHKPENFDQNAEFEQNFQKQVGIIRSAREFFQEKLRLANEN

Sequences:

>Translated_309_residues
MQKTQRQKQRNSKMSLKNTEPNFFVGIYEKAIDKRFSLIDKIKIAKQAGFNFIEMSVDETDEFASRLDFSNDEIKVILDT
LIEYDFYINSMCLSLHRKFPFGSASEKIREKALKIMEKALILAKKLKISIIQLAAYDIYYEEPHPNSEIFFIKTMKKIVA
LAKKYSIIIAFESMDRKFAGTITRLLYLQKSVGGGVFLYPDLGNLSRFSNDLEAEIKLGKSEIVAFHFKDTLPDTFKNLD
FGQGDVDFVSAFKYIINAEINVPFVIEM*HKPENFDQNAEFEQNFQKQVGIIRSAREFFQEKLRLANEN
>Mature_309_residues
MQKTQRQKQRNSKMSLKNTEPNFFVGIYEKAIDKRFSLIDKIKIAKQAGFNFIEMSVDETDEFASRLDFSNDEIKVILDT
LIEYDFYINSMCLSLHRKFPFGSASEKIREKALKIMEKALILAKKLKISIIQLAAYDIYYEEPHPNSEIFFIKTMKKIVA
LAKKYSIIIAFESMDRKFAGTITRLLYLQKSVGGGVFLYPDLGNLSRFSNDLEAEIKLGKSEIVAFHFKDTLPDTFKNLD
FGQGDVDFVSAFKYIINAEINVPFVIEM*HKPENFDQNAEFEQNFQKQVGIIRSAREFFQEKLRLANEN

Specific function: Catalyzes the isomerization of L-xylulose-5-phosphate to L-ribulose-5-phosphate. Is involved in the anaerobic L-ascorbate utilization [H]

COG id: COG3623

COG function: function code G; Putative L-xylulose-5-phosphate 3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HUMPI family [H]

Homologues:

Organism=Escherichia coli, GI87082294, Length=254, Percent_Identity=43.3070866141732, Blast_Score=207, Evalue=7e-55,
Organism=Escherichia coli, GI1790641, Length=256, Percent_Identity=39.0625, Blast_Score=204, Evalue=8e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004560
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: =5.1.3.22 [H]

Molecular weight: Translated: 35709; Mature: 35709

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTQRQKQRNSKMSLKNTEPNFFVGIYEKAIDKRFSLIDKIKIAKQAGFNFIEMSVDET
CCCHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCH
DEFASRLDFSNDEIKVILDTLIEYDFYINSMCLSLHRKFPFGSASEKIREKALKIMEKAL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ILAKKLKISIIQLAAYDIYYEEPHPNSEIFFIKTMKKIVALAKKYSIIIAFESMDRKFAG
HHHHHHHHHHHEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHCEEEEEEECCCCHHHH
TITRLLYLQKSVGGGVFLYPDLGNLSRFSNDLEAEIKLGKSEIVAFHFKDTLPDTFKNLD
HHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCHHHEEECCCCEEEEEECCCCCHHHHCCC
FGQGDVDFVSAFKYIINAEINVPFVIEMHKPENFDQNAEFEQNFQKQVGIIRSAREFFQE
CCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KLRLANEN
HHHHCCCC
>Mature Secondary Structure
MQKTQRQKQRNSKMSLKNTEPNFFVGIYEKAIDKRFSLIDKIKIAKQAGFNFIEMSVDET
CCCHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCH
DEFASRLDFSNDEIKVILDTLIEYDFYINSMCLSLHRKFPFGSASEKIREKALKIMEKAL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
ILAKKLKISIIQLAAYDIYYEEPHPNSEIFFIKTMKKIVALAKKYSIIIAFESMDRKFAG
HHHHHHHHHHHEEEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHCEEEEEEECCCCHHHH
TITRLLYLQKSVGGGVFLYPDLGNLSRFSNDLEAEIKLGKSEIVAFHFKDTLPDTFKNLD
HHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCHHHEEECCCCEEEEEECCCCCHHHHCCC
FGQGDVDFVSAFKYIINAEINVPFVIEMHKPENFDQNAEFEQNFQKQVGIIRSAREFFQE
CCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KLRLANEN
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]