| Definition | Mycoplasma hyopneumoniae 232, complete genome. |
|---|---|
| Accession | NC_006360 |
| Length | 892,758 |
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The map label for this gene is 54020504
Identifier: 54020504
GI number: 54020504
Start: 515390
End: 517300
Strand: Reverse
Name: 54020504
Synonym: mhp436
Alternate gene names: NA
Gene position: 517300-515390 (Counterclockwise)
Preceding gene: 54020505
Following gene: 54020503
Centisome position: 57.94
GC content: 32.34
Gene sequence:
>1911_bases ATGAAAAAAATTATAAAAAATTTATTAATTTTACCAGCATTTACTTTTCCGTTGATTTCTGCTGCTTGTTCAGATCCTGC TATTCTAAAAGATGACCTAAATACAAGAACTTTTTCAAATCCAGAAGCAACAGAAAAATACCAACTCTTAAAGGAAATGC TAGAAATTCCCCTTGCAATTGAAAAAAATCTGATTGCCGAATATTATTTTTCCGCTCTTATTAGTCAATATTATGAAGAT TCCTTGATATATCCAGGACTAAATCCACTCTTATTTCAGCGTTTTTTATATAATGAGCAAAAGGATGTAATCCTTAAAAA AATTGAACAATTTGCTAAAGATCCAGATTTTCCTGAATATGTCAGAAAAAATTATCAAGGAACTTCTTATCTCTCAGCAT CAGAATTTTTAAAAAAATGGCGTCCTTCCCAAGAAAAATACCTAAAATCTACTAATTTAAAGGCAAATCCCGATTTTATT ATGCAGGATTATGGAGCTGGGTTTTCAGTAAATAATATCGACCTTGATGAAAGTTATCTTTATTATAAACTAGTAAGTAG TTATGCAAAATTTTATCTCAATGAGATTTTCCCAAAACAAAAAAATAACAATATCCCAATTTCGCCCAACCAAATTGATC CGAATGTCCTAGCCCAAGCCTTAAAAAATCTCCCGCAAAATCAAGATGGTCAAGATGAAAATGACCGACAAAGTCAAGCC CAGAACCAGAGCGAAGATCAAGATGCTAATAAAGAATCTAATAGTGCTCAAGGAAATTCTGAAAAAACAAAACCCAAAGA AGCTCAAGTAGTAGAACAAAATGATGAAAAAGAGCAAAAAGACGAAAAACAAGCCATCCAGATCCCAATCCCTAGGGGTG CGCTTGCCCGGATTGTCGATACGATTCGCGAGGCAACAACCCAACCACTTTCAAATGCCTACTGATGAAATTATAACTAC AGACAGTTAAAGGAATTAGAACTCCAAAAAAGAAGGGAAATAAATGATATATCAAACCCTGATAATTTGAAACTCCCTTT GATTAATGACAAAGATTTCCAAAAGAAATTAGAACTAATAACAAGACTAGAAAAATTTACAATAATAGGCAAAGATGGCC GTAAATACAAGGTTCAGCCGCGCGCTTTTTTCTTTGTTGATAATAAAACTTTTGCCGATGATAAAGAAAACAAAATTAAA AACGCAATTTATCGTCTTTATTGAATCGTTGATTCAAACCCAGATTCTGAAATAAATAATGGTGATAAATCAATTGAACC AGAACAAAATCCAGATTTAGACCGAAAAGATCCTTTTGAAGAGCAACCAAATCTTCCAAAATTAGGTCCCCACTTACCCC AAAATCAAAATTTTTATGGAAAACCGGTGAATTTTGCCGCTTATGATAAAAGTAAGTCAAAAATAAATGATCAACGAAAG CCACAACCAAAAGTAGAAAAAGAAGAAAAAGAAGAAAAAAAACCGCCGATAGTTCAAGGTCCTAGTCCAAAACCACAAAA GATTGAAAATATCGGTCTTGTTAATGATTTTTATAAATACAAGTTTAACGATAAAATTCATAAATTTGAACCGACTGAGT ATTATAAAAATACAGCAAATTTTTCTCAGGGTGGCCTTTATAGTGCAAATTTGCTCGAATTAGAAGAGGAAATAAAGAAA CAAGATCCGGATAATCCTAAAATATTTTATGTTCAAAGACGAATTGATATTGCTGGTTTTCTAACAAAAGGCACACTTTT ACCATTTCAACCCGCAAATCTTGAGAATAATTTATCAAGCCTTTCGCTTTTTGATAGATATTCCCAATTTCTGAGGAGCG GCAGATTCGATAACAATTATTATATAATTGGATCCGATAAGGTTGAGGAATTTGATAAGTTGAAAAGATAA
Upstream 100 bases:
>100_bases TATGGTATTATTTATCTTTAAATAATATTATAAAACTATAAAAAATCATAACCTAATTTTTTATAGTTTTATAGATAAAA ATAAGGCGGGCTAACTAAAA
Downstream 100 bases:
>100_bases AACTTCCAATTGTTTTATTTATAGTATTAATCATACCTAAAAAAAATCAAAATATTTATTTTTTTTAGGTATTTTTTATA AGTAAACAAAAAGTTTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MKKIIKNLLILPAFTFPLISAACSDPAILKDDLNTRTFSNPEATEKYQLLKEMLEIPLAIEKNLIAEYYFSALISQYYED SLIYPGLNPLLFQRFLYNEQKDVILKKIEQFAKDPDFPEYVRKNYQGTSYLSASEFLKKWRPSQEKYLKSTNLKANPDFI MQDYGAGFSVNNIDLDESYLYYKLVSSYAKFYLNEIFPKQKNNNIPISPNQIDPNVLAQALKNLPQNQDGQDENDRQSQA QNQSEDQDANKESNSAQGNSEKTKPKEAQVVEQNDEKEQKDEKQAIQIPIPRGALARIVDTIREATTQPLSNAYWWNYNY RQLKELELQKRREINDISNPDNLKLPLINDKDFQKKLELITRLEKFTIIGKDGRKYKVQPRAFFFVDNKTFADDKENKIK NAIYRLYWIVDSNPDSEINNGDKSIEPEQNPDLDRKDPFEEQPNLPKLGPHLPQNQNFYGKPVNFAAYDKSKSKINDQRK PQPKVEKEEKEEKKPPIVQGPSPKPQKIENIGLVNDFYKYKFNDKIHKFEPTEYYKNTANFSQGGLYSANLLELEEEIKK QDPDNPKIFYVQRRIDIAGFLTKGTLLPFQPANLENNLSSLSLFDRYSQFLRSGRFDNNYYIIGSDKVEEFDKLKR
Sequences:
>Translated_636_residues MKKIIKNLLILPAFTFPLISAACSDPAILKDDLNTRTFSNPEATEKYQLLKEMLEIPLAIEKNLIAEYYFSALISQYYED SLIYPGLNPLLFQRFLYNEQKDVILKKIEQFAKDPDFPEYVRKNYQGTSYLSASEFLKKWRPSQEKYLKSTNLKANPDFI MQDYGAGFSVNNIDLDESYLYYKLVSSYAKFYLNEIFPKQKNNNIPISPNQIDPNVLAQALKNLPQNQDGQDENDRQSQA QNQSEDQDANKESNSAQGNSEKTKPKEAQVVEQNDEKEQKDEKQAIQIPIPRGALARIVDTIREATTQPLSNAY**NYNY RQLKELELQKRREINDISNPDNLKLPLINDKDFQKKLELITRLEKFTIIGKDGRKYKVQPRAFFFVDNKTFADDKENKIK NAIYRLY*IVDSNPDSEINNGDKSIEPEQNPDLDRKDPFEEQPNLPKLGPHLPQNQNFYGKPVNFAAYDKSKSKINDQRK PQPKVEKEEKEEKKPPIVQGPSPKPQKIENIGLVNDFYKYKFNDKIHKFEPTEYYKNTANFSQGGLYSANLLELEEEIKK QDPDNPKIFYVQRRIDIAGFLTKGTLLPFQPANLENNLSSLSLFDRYSQFLRSGRFDNNYYIIGSDKVEEFDKLKR >Mature_636_residues MKKIIKNLLILPAFTFPLISAACSDPAILKDDLNTRTFSNPEATEKYQLLKEMLEIPLAIEKNLIAEYYFSALISQYYED SLIYPGLNPLLFQRFLYNEQKDVILKKIEQFAKDPDFPEYVRKNYQGTSYLSASEFLKKWRPSQEKYLKSTNLKANPDFI MQDYGAGFSVNNIDLDESYLYYKLVSSYAKFYLNEIFPKQKNNNIPISPNQIDPNVLAQALKNLPQNQDGQDENDRQSQA QNQSEDQDANKESNSAQGNSEKTKPKEAQVVEQNDEKEQKDEKQAIQIPIPRGALARIVDTIREATTQPLSNAY**NYNY RQLKELELQKRREINDISNPDNLKLPLINDKDFQKKLELITRLEKFTIIGKDGRKYKVQPRAFFFVDNKTFADDKENKIK NAIYRLY*IVDSNPDSEINNGDKSIEPEQNPDLDRKDPFEEQPNLPKLGPHLPQNQNFYGKPVNFAAYDKSKSKINDQRK PQPKVEKEEKEEKKPPIVQGPSPKPQKIENIGLVNDFYKYKFNDKIHKFEPTEYYKNTANFSQGGLYSANLLELEEEIKK QDPDNPKIFYVQRRIDIAGFLTKGTLLPFQPANLENNLSSLSLFDRYSQFLRSGRFDNNYYIIGSDKVEEFDKLKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73580; Mature: 73580
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIIKNLLILPAFTFPLISAACSDPAILKDDLNTRTFSNPEATEKYQLLKEMLEIPLAI CHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHH EKNLIAEYYFSALISQYYEDSLIYPGLNPLLFQRFLYNEQKDVILKKIEQFAKDPDFPEY HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHH VRKNYQGTSYLSASEFLKKWRPSQEKYLKSTNLKANPDFIMQDYGAGFSVNNIDLDESYL HHHCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHCCCCCEECCCCCCCHHH YYKLVSSYAKFYLNEIFPKQKNNNIPISPNQIDPNVLAQALKNLPQNQDGQDENDRQSQA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH QNQSEDQDANKESNSAQGNSEKTKPKEAQVVEQNDEKEQKDEKQAIQIPIPRGALARIVD HCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCEEEECCCCHHHHHHHH TIREATTQPLSNAYNYNYRQLKELELQKRREINDISNPDNLKLPLINDKDFQKKLELITR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHH LEKFTIIGKDGRKYKVQPRAFFFVDNKTFADDKENKIKNAIYRLYIVDSNPDSEINNGDK HHHHEEECCCCCEEEECCEEEEEECCCCCCCCHHHHHHHEEEEEEEEECCCCCCCCCCCC SIEPEQNPDLDRKDPFEEQPNLPKLGPHLPQNQNFYGKPVNFAAYDKSKSKINDQRKPQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHCCCCCCCC KVEKEEKEEKKPPIVQGPSPKPQKIENIGLVNDFYKYKFNDKIHKFEPTEYYKNTANFSQ CCCHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCCC GGLYSANLLELEEEIKKQDPDNPKIFYVQRRIDIAGFLTKGTLLPFQPANLENNLSSLSL CCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECHHHHHHCCCCCCCCCCCCCCCHHHHHH FDRYSQFLRSGRFDNNYYIIGSDKVEEFDKLKR HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCC >Mature Secondary Structure MKKIIKNLLILPAFTFPLISAACSDPAILKDDLNTRTFSNPEATEKYQLLKEMLEIPLAI CHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHH EKNLIAEYYFSALISQYYEDSLIYPGLNPLLFQRFLYNEQKDVILKKIEQFAKDPDFPEY HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHH VRKNYQGTSYLSASEFLKKWRPSQEKYLKSTNLKANPDFIMQDYGAGFSVNNIDLDESYL HHHCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHCCCCCEECCCCCCCHHH YYKLVSSYAKFYLNEIFPKQKNNNIPISPNQIDPNVLAQALKNLPQNQDGQDENDRQSQA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH QNQSEDQDANKESNSAQGNSEKTKPKEAQVVEQNDEKEQKDEKQAIQIPIPRGALARIVD HCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCEEEECCCCHHHHHHHH TIREATTQPLSNAYNYNYRQLKELELQKRREINDISNPDNLKLPLINDKDFQKKLELITR HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHH LEKFTIIGKDGRKYKVQPRAFFFVDNKTFADDKENKIKNAIYRLYIVDSNPDSEINNGDK HHHHEEECCCCCEEEECCEEEEEECCCCCCCCHHHHHHHEEEEEEEEECCCCCCCCCCCC SIEPEQNPDLDRKDPFEEQPNLPKLGPHLPQNQNFYGKPVNFAAYDKSKSKINDQRKPQP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHCCCCCCCC KVEKEEKEEKKPPIVQGPSPKPQKIENIGLVNDFYKYKFNDKIHKFEPTEYYKNTANFSQ CCCHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCCC GGLYSANLLELEEEIKKQDPDNPKIFYVQRRIDIAGFLTKGTLLPFQPANLENNLSSLSL CCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECHHHHHHCCCCCCCCCCCCCCCHHHHHH FDRYSQFLRSGRFDNNYYIIGSDKVEEFDKLKR HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA