Definition | Mycoplasma hyopneumoniae 232, complete genome. |
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Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020477
Identifier: 54020477
GI number: 54020477
Start: 432755
End: 434422
Strand: Reverse
Name: 54020477
Synonym: mhp366
Alternate gene names: NA
Gene position: 434422-432755 (Counterclockwise)
Preceding gene: 54020478
Following gene: 54020476
Centisome position: 48.66
GC content: 27.04
Gene sequence:
>1668_bases ATGAAAAAAATGGTAAAATATTTTCTAGTTTTAAGTTCTATAAGTCCTTTTTTAGTTCTAAGTTGTACTTATAAAATTGA ATCTAGCAAAACTAAGAAAAAAATATTACCGGAAATAAGAAGTGAAGAAACTCCCGAAAAAAGTGAAGATAAATTAGATC CAACAAAAGAATCAAAAGTAAGTCCAGTTGAAGAAAATACCCAAAAAGAAAATAGCCAAAAAAATGATGTAGTAAATAGC CAAAATAAAACAGAAAAAACGGAAAAAACACAAGGAACGGAAAATCAAACCACAGATAACAATTTTTGGTCTGAATCTAC AAGTGATTTATCAGACCAAACTAATTTTGATTTTGCAAAGGTAAATCAAAATTCAATAAAAATTAATATTAATGGACTAA CACAAGCCAGCGAAAGCGATTTTAGCAAAAATGAGGTAAAAAATATTGCTAAAACGCCAACTTATTATAAATATCAGCTT AAAAATTGGGAAAATGTTATAAAAAAAGAAAATGAAACTACTTTTTTAGGTCAGAAAAATGATAATTTAAATATTTTTCT AATAAAACAAATGAATAATAATTTAGTCGATAATGTTAATGCAAAAGCAAATTATTATTCCTATTTTAACCCAAATAGAC TAGGAAATTATTATATTCTACCTTACTTTGGATTTAAATCAGATAGTCTTGAAGAAAAAAGATATGCAAATATTTTTACT CGAAACATTCGGTTTGCCCCTGGAACTGCAGTTTTTTTAAACGCTAATTCCGGAAAAGCCGCTTTTTTAACTAACAGACA CGTTTTATATCCTTACCATAACGGTGGCCCATTTTGAAAAGTAATGAATACCAAAATTACCGGTAATTCGCTTAATGCTA ACTTACAAAAATTTTTACAATACTATGATGACTTTAAAATTAAAGAACTAGATAATCGGATTCTTTTTCGTCTTTGGGAA ATAAAATGACTCAAAGATAATGGCAAAGAACTTTTCCCGGTTGATTGTCGAGAGTGTAAAATCAAAGAATTAACTGATTA TATGCAAAATTTATATAACAACTTTTTTGAAGTTCCTAATTTTGATAATCAAGGTTTGGATGTTGCTGTTTTTTATTTTA ATTATTCAAAATTTATTAGTGAAACTGAAAGTTTAATAAAATATTTTCAGACCAATCATCAAGATTTAATTAAGACAATT CATACCCTAGCAAATGGAAAATTTGAGAAATTTGTATCAAATTTTAATGAATTTAAAAAATATTGAGAAAAAATTTCAAA ATTAAAACCAACTAAAATTTCTGAACAAAGTTGAGATGATCAAGACTTTGATTATACAACAAAAATTGGGATGTTTTGGG CTAATAATTTAATTTCAAAAAACGTTTTTAAAGGTGTTAATTTCCGCAGGAACCCACAAAACCCTAAACTAATTTCGGCA AACTTTTTTGCTTCTAATGGACCAGGAGCCTCAGGTTCAGGTGTATTTAATGCCGATGGAACTTTAGCTTTTATAAATGG ATCGATTTTAACAATAAATGGAAATGTTAGATCTCTCTTTTATGATCAATTTGGTTTAACCTCGCATATGTCTTCGGGAA TTGCACTTAAGACAAATAGATATAATTTAGTTGATCAAATCAATAAAGTTTATTTAAAAAAGGAATAA
Upstream 100 bases:
>100_bases TTGTTTTTTGTTATAATTTTAATTATGTTTTTTAATTTAACAGAATTAAAATTTAAAAAGTAAAAATTGATAATTTTTTA ATGTAAAAGCGAGAGTTATT
Downstream 100 bases:
>100_bases AAAAAACAAAAATTCAAATTTTTTTGGTTTTTTTAAATTGTAATAATTAGCTAGTTAATCTTTTTTATAAAACGGGATAA TATGGATGTGAGTATGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MKKMVKYFLVLSSISPFLVLSCTYKIESSKTKKKILPEIRSEETPEKSEDKLDPTKESKVSPVEENTQKENSQKNDVVNS QNKTEKTEKTQGTENQTTDNNFWSESTSDLSDQTNFDFAKVNQNSIKININGLTQASESDFSKNEVKNIAKTPTYYKYQL KNWENVIKKENETTFLGQKNDNLNIFLIKQMNNNLVDNVNAKANYYSYFNPNRLGNYYILPYFGFKSDSLEEKRYANIFT RNIRFAPGTAVFLNANSGKAAFLTNRHVLYPYHNGGPFWKVMNTKITGNSLNANLQKFLQYYDDFKIKELDNRILFRLWE IKWLKDNGKELFPVDCRECKIKELTDYMQNLYNNFFEVPNFDNQGLDVAVFYFNYSKFISETESLIKYFQTNHQDLIKTI HTLANGKFEKFVSNFNEFKKYWEKISKLKPTKISEQSWDDQDFDYTTKIGMFWANNLISKNVFKGVNFRRNPQNPKLISA NFFASNGPGASGSGVFNADGTLAFINGSILTINGNVRSLFYDQFGLTSHMSSGIALKTNRYNLVDQINKVYLKKE
Sequences:
>Translated_555_residues MKKMVKYFLVLSSISPFLVLSCTYKIESSKTKKKILPEIRSEETPEKSEDKLDPTKESKVSPVEENTQKENSQKNDVVNS QNKTEKTEKTQGTENQTTDNNFWSESTSDLSDQTNFDFAKVNQNSIKININGLTQASESDFSKNEVKNIAKTPTYYKYQL KNWENVIKKENETTFLGQKNDNLNIFLIKQMNNNLVDNVNAKANYYSYFNPNRLGNYYILPYFGFKSDSLEEKRYANIFT RNIRFAPGTAVFLNANSGKAAFLTNRHVLYPYHNGGPF*KVMNTKITGNSLNANLQKFLQYYDDFKIKELDNRILFRLWE IK*LKDNGKELFPVDCRECKIKELTDYMQNLYNNFFEVPNFDNQGLDVAVFYFNYSKFISETESLIKYFQTNHQDLIKTI HTLANGKFEKFVSNFNEFKKY*EKISKLKPTKISEQS*DDQDFDYTTKIGMFWANNLISKNVFKGVNFRRNPQNPKLISA NFFASNGPGASGSGVFNADGTLAFINGSILTINGNVRSLFYDQFGLTSHMSSGIALKTNRYNLVDQINKVYLKKE >Mature_555_residues MKKMVKYFLVLSSISPFLVLSCTYKIESSKTKKKILPEIRSEETPEKSEDKLDPTKESKVSPVEENTQKENSQKNDVVNS QNKTEKTEKTQGTENQTTDNNFWSESTSDLSDQTNFDFAKVNQNSIKININGLTQASESDFSKNEVKNIAKTPTYYKYQL KNWENVIKKENETTFLGQKNDNLNIFLIKQMNNNLVDNVNAKANYYSYFNPNRLGNYYILPYFGFKSDSLEEKRYANIFT RNIRFAPGTAVFLNANSGKAAFLTNRHVLYPYHNGGPF*KVMNTKITGNSLNANLQKFLQYYDDFKIKELDNRILFRLWE IK*LKDNGKELFPVDCRECKIKELTDYMQNLYNNFFEVPNFDNQGLDVAVFYFNYSKFISETESLIKYFQTNHQDLIKTI HTLANGKFEKFVSNFNEFKKY*EKISKLKPTKISEQS*DDQDFDYTTKIGMFWANNLISKNVFKGVNFRRNPQNPKLISA NFFASNGPGASGSGVFNADGTLAFINGSILTINGNVRSLFYDQFGLTSHMSSGIALKTNRYNLVDQINKVYLKKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63578; Mature: 63578
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMVKYFLVLSSISPFLVLSCTYKIESSKTKKKILPEIRSEETPEKSEDKLDPTKESKV CHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SPVEENTQKENSQKNDVVNSQNKTEKTEKTQGTENQTTDNNFWSESTSDLSDQTNFDFAK CCCHHHHHHHCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE VNQNSIKININGLTQASESDFSKNEVKNIAKTPTYYKYQLKNWENVIKKENETTFLGQKN ECCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHCCCCEEEEECCC DNLNIFLIKQMNNNLVDNVNAKANYYSYFNPNRLGNYYILPYFGFKSDSLEEKRYANIFT CCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH RNIRFAPGTAVFLNANSGKAAFLTNRHVLYPYHNGGPFKVMNTKITGNSLNANLQKFLQY CCEEECCCCEEEEECCCCCEEEEECCEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHH YDDFKIKELDNRILFRLWEIKLKDNGKELFPVDCRECKIKELTDYMQNLYNNFFEVPNFD HCCCCHHHHHHHEEEEEEEEEECCCCCEECCCCHHHCCHHHHHHHHHHHHHHHCCCCCCC NQGLDVAVFYFNYSKFISETESLIKYFQTNHQDLIKTIHTLANGKFEKFVSNFNEFKKYE CCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH KISKLKPTKISEQSDDQDFDYTTKIGMFWANNLISKNVFKGVNFRRNPQNPKLISANFFA HHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEE SNGPGASGSGVFNADGTLAFINGSILTINGNVRSLFYDQFGLTSHMSSGIALKTNRYNLV CCCCCCCCCEEEECCCEEEEEECEEEEEECCEEEEHHHHHCCHHHHCCCEEEEECCCHHH DQINKVYLKKE HHHHHHEEECC >Mature Secondary Structure MKKMVKYFLVLSSISPFLVLSCTYKIESSKTKKKILPEIRSEETPEKSEDKLDPTKESKV CHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SPVEENTQKENSQKNDVVNSQNKTEKTEKTQGTENQTTDNNFWSESTSDLSDQTNFDFAK CCCHHHHHHHCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE VNQNSIKININGLTQASESDFSKNEVKNIAKTPTYYKYQLKNWENVIKKENETTFLGQKN ECCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHCCCCEEEEECCC DNLNIFLIKQMNNNLVDNVNAKANYYSYFNPNRLGNYYILPYFGFKSDSLEEKRYANIFT CCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH RNIRFAPGTAVFLNANSGKAAFLTNRHVLYPYHNGGPFKVMNTKITGNSLNANLQKFLQY CCEEECCCCEEEEECCCCCEEEEECCEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHH YDDFKIKELDNRILFRLWEIKLKDNGKELFPVDCRECKIKELTDYMQNLYNNFFEVPNFD HCCCCHHHHHHHEEEEEEEEEECCCCCEECCCCHHHCCHHHHHHHHHHHHHHHCCCCCCC NQGLDVAVFYFNYSKFISETESLIKYFQTNHQDLIKTIHTLANGKFEKFVSNFNEFKKYE CCCCEEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH KISKLKPTKISEQSDDQDFDYTTKIGMFWANNLISKNVFKGVNFRRNPQNPKLISANFFA HHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEE SNGPGASGSGVFNADGTLAFINGSILTINGNVRSLFYDQFGLTSHMSSGIALKTNRYNLV CCCCCCCCCEEEECCCEEEEEECEEEEEECCEEEEHHHHHCCHHHHCCCEEEEECCCHHH DQINKVYLKKE HHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA