Definition | Mycoplasma hyopneumoniae 232, complete genome. |
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Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020470
Identifier: 54020470
GI number: 54020470
Start: 414293
End: 416020
Strand: Reverse
Name: 54020470
Synonym: mhp353
Alternate gene names: NA
Gene position: 416020-414293 (Counterclockwise)
Preceding gene: 54020471
Following gene: 54020469
Centisome position: 46.6
GC content: 22.74
Gene sequence:
>1728_bases ATGATTGTCCGAAAGTTTAGAAGAATAGGTATGATACCTAAAATTTTTACAAAAAAATGAGTTATTTTTTCAATTATTGG CGCTAGTTTGGGATCAATTGCTATAAGTGTGCCATTAATTTATTATGGTTTTAATAGCTTTATTGCGGTTGAAATAAATA GATTCGAACCTAAAACATTAACTAGTAATTCAAAATCCGCATCTATTTTTTCTAATTCCAATCAAGAAAAAATAAACAGT TTTATTTTAGAAAACGAATTAAAAAAAGGTACACAAAAGAGTGACTATGCTCTAAAAAATAATTTTCAGGGAGAGTATAA TTACGAATATGCAAATGAATTTTTAGCAATTTTAAAAATTACAAATAATATTAAGCAATTTGAAAGGGTTAAATCAATAT TAAAAACTACGCCTAATTTGTCGCGAAGATTACAATTTAGTTTGAGTGATGTATACCAAATAAGCAATATTTATTTTAAT ATTGACCCAATTAATAACGTTCCTAAACTCGTTAATTTTATTTCAAAATATTATGACAAAAACAAAAAGGAATTTATTAA TATTAATGATGATGATTTTCAAGATCTAGCATGAAATATTTTATATTTTAAATTAAATGGGCATGATTTTCAAAAATATT TCGATATTAAAGATTGAATTAAAAATGAATTTAAGAAAGCAAATTTTGAAAGTGAAGAGGTACTAATAAGTGATAATGAA CCTCATGAAACTTTAGAAAAAAAATCTTTTCTACTTTTTAGAAAATATATCGCTATTTTAACAATAATTAATAATTTAGA TAAGGATTATTTTGTAGACATTATAAATGAAAAACAAAAATCAATAAATGTTTTAATTAAAAAATGAGATAACCATTTTA GACAAATTATTGAAAATAAAGATAGAAAAGAAAACCAAAGTAATTTGGTTATCACACCAATGGTTAGTTTTTACTATTTT AGCAAGAATTTTTATAACTACTCATCAGAGTATTTGTCAAAAATAAATGACTTTACTAAAAATTGGTTAATAAATTTTAG CTCATCAAGCGATCCAAGTTTTTATGGTTCAGGTCTTCTTTACTATTATTTTGGAAATAATAAAAAAATAGAGCCCGAAT TACTTAAAAAAAGTGAAGAAATTGTAGATTATGGCATTGAAAATGGTTTATTTGCTCACGAACCTGACATCACAAATACT ATTTTTGTAAAACAGATTTTAGACTTGAGTGAGAAAAAAGATAATCAAGTGCAAAAAATAAATCAAACAATAGAAACCTT ATTTAAGCAAACAACGGAAAAACCGGAAAATAATCCTGATTTTTTTGAGGACTTATATAATTATGTATTTTTTTCAATTA AGACTCATCCCGATTTTTTTAAGAGTCAAAAAGATTTTTTAAATACAATAATTGATTATAGTAAATTTGTAAAAAAACCA ATTGATTTTTTTTATTTGTTTAAAACAATTGCGCTATTAAATAGTTTTTATAATACAGACAAGCCAACAAAAATTAATGT TTCCAAGCAAATTTTTGACAATATTATAAATGTAAAACTAGAAAAAAATGCTCCATTTTTTTTAAAATTTATTAACTTAT TTATTAAGTTTATTTTTAAAAATGAATTAGACGACAACAAGGAAATTGTTGAATTTATAAACCAAAATCTTGATGAAAAA AATATAAATAACGCTGAATTTTTAGAACATCTTTTTTGGTATATTTAA
Upstream 100 bases:
>100_bases AATACAAAGTAACGACCTTTGGTAGTTCAGCGTCTGCACATGCCAAATATAAATATAAAACTGCAAGTATATTGTCTGAT TCTTCTTATCATAGAGTTTC
Downstream 100 bases:
>100_bases TTTCAAAGTACAATTAAATCAAAATTAGAGCACCAAATAGATTCTACTAAATTAGAAAAATTTATTTCATTGTTAAAAAA AGATATTTTAGCTAAAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MIVRKFRRIGMIPKIFTKKWVIFSIIGASLGSIAISVPLIYYGFNSFIAVEINRFEPKTLTSNSKSASIFSNSNQEKINS FILENELKKGTQKSDYALKNNFQGEYNYEYANEFLAILKITNNIKQFERVKSILKTTPNLSRRLQFSLSDVYQISNIYFN IDPINNVPKLVNFISKYYDKNKKEFININDDDFQDLAWNILYFKLNGHDFQKYFDIKDWIKNEFKKANFESEEVLISDNE PHETLEKKSFLLFRKYIAILTIINNLDKDYFVDIINEKQKSINVLIKKWDNHFRQIIENKDRKENQSNLVITPMVSFYYF SKNFYNYSSEYLSKINDFTKNWLINFSSSSDPSFYGSGLLYYYFGNNKKIEPELLKKSEEIVDYGIENGLFAHEPDITNT IFVKQILDLSEKKDNQVQKINQTIETLFKQTTEKPENNPDFFEDLYNYVFFSIKTHPDFFKSQKDFLNTIIDYSKFVKKP IDFFYLFKTIALLNSFYNTDKPTKINVSKQIFDNIINVKLEKNAPFFLKFINLFIKFIFKNELDDNKEIVEFINQNLDEK NINNAEFLEHLFWYI
Sequences:
>Translated_575_residues MIVRKFRRIGMIPKIFTKK*VIFSIIGASLGSIAISVPLIYYGFNSFIAVEINRFEPKTLTSNSKSASIFSNSNQEKINS FILENELKKGTQKSDYALKNNFQGEYNYEYANEFLAILKITNNIKQFERVKSILKTTPNLSRRLQFSLSDVYQISNIYFN IDPINNVPKLVNFISKYYDKNKKEFININDDDFQDLA*NILYFKLNGHDFQKYFDIKD*IKNEFKKANFESEEVLISDNE PHETLEKKSFLLFRKYIAILTIINNLDKDYFVDIINEKQKSINVLIKK*DNHFRQIIENKDRKENQSNLVITPMVSFYYF SKNFYNYSSEYLSKINDFTKNWLINFSSSSDPSFYGSGLLYYYFGNNKKIEPELLKKSEEIVDYGIENGLFAHEPDITNT IFVKQILDLSEKKDNQVQKINQTIETLFKQTTEKPENNPDFFEDLYNYVFFSIKTHPDFFKSQKDFLNTIIDYSKFVKKP IDFFYLFKTIALLNSFYNTDKPTKINVSKQIFDNIINVKLEKNAPFFLKFINLFIKFIFKNELDDNKEIVEFINQNLDEK NINNAEFLEHLFWYI >Mature_575_residues MIVRKFRRIGMIPKIFTKK*VIFSIIGASLGSIAISVPLIYYGFNSFIAVEINRFEPKTLTSNSKSASIFSNSNQEKINS FILENELKKGTQKSDYALKNNFQGEYNYEYANEFLAILKITNNIKQFERVKSILKTTPNLSRRLQFSLSDVYQISNIYFN IDPINNVPKLVNFISKYYDKNKKEFININDDDFQDLA*NILYFKLNGHDFQKYFDIKD*IKNEFKKANFESEEVLISDNE PHETLEKKSFLLFRKYIAILTIINNLDKDYFVDIINEKQKSINVLIKK*DNHFRQIIENKDRKENQSNLVITPMVSFYYF SKNFYNYSSEYLSKINDFTKNWLINFSSSSDPSFYGSGLLYYYFGNNKKIEPELLKKSEEIVDYGIENGLFAHEPDITNT IFVKQILDLSEKKDNQVQKINQTIETLFKQTTEKPENNPDFFEDLYNYVFFSIKTHPDFFKSQKDFLNTIIDYSKFVKKP IDFFYLFKTIALLNSFYNTDKPTKINVSKQIFDNIINVKLEKNAPFFLKFINLFIKFIFKNELDDNKEIVEFINQNLDEK NINNAEFLEHLFWYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67608; Mature: 67608
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVRKFRRIGMIPKIFTKKVIFSIIGASLGSIAISVPLIYYGFNSFIAVEINRFEPKTLT CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCC SNSKSASIFSNSNQEKINSFILENELKKGTQKSDYALKNNFQGEYNYEYANEFLAILKIT CCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHH NNIKQFERVKSILKTTPNLSRRLQFSLSDVYQISNIYFNIDPINNVPKLVNFISKYYDKN HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCEEEEECCCCCHHHHHHHHHHHHCCC KKEFININDDDFQDLANILYFKLNGHDFQKYFDIKDIKNEFKKANFESEEVLISDNEPHE CCEEECCCCCHHHHHHHHEEEEECCCCHHHHHCHHHHHHHHHHCCCCCCEEEECCCCCHH TLEKKSFLLFRKYIAILTIINNLDKDYFVDIINEKQKSINVLIKKDNHFRQIIENKDRKE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCCC NQSNLVITPMVSFYYFSKNFYNYSSEYLSKINDFTKNWLINFSSSSDPSFYGSGLLYYYF CCCCEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEE GNNKKIEPELLKKSEEIVDYGIENGLFAHEPDITNTIFVKQILDLSEKKDNQVQKINQTI CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH ETLFKQTTEKPENNPDFFEDLYNYVFFSIKTHPDFFKSQKDFLNTIIDYSKFVKKPIDFF HHHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YLFKTIALLNSFYNTDKPTKINVSKQIFDNIINVKLEKNAPFFLKFINLFIKFIFKNELD HHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCC DNKEIVEFINQNLDEKNINNAEFLEHLFWYI CCHHHHHHHHCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MIVRKFRRIGMIPKIFTKKVIFSIIGASLGSIAISVPLIYYGFNSFIAVEINRFEPKTLT CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCC SNSKSASIFSNSNQEKINSFILENELKKGTQKSDYALKNNFQGEYNYEYANEFLAILKIT CCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHH NNIKQFERVKSILKTTPNLSRRLQFSLSDVYQISNIYFNIDPINNVPKLVNFISKYYDKN HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCEEEEECCCCCHHHHHHHHHHHHCCC KKEFININDDDFQDLANILYFKLNGHDFQKYFDIKDIKNEFKKANFESEEVLISDNEPHE CCEEECCCCCHHHHHHHHEEEEECCCCHHHHHCHHHHHHHHHHCCCCCCEEEECCCCCHH TLEKKSFLLFRKYIAILTIINNLDKDYFVDIINEKQKSINVLIKKDNHFRQIIENKDRKE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHCCCCCCC NQSNLVITPMVSFYYFSKNFYNYSSEYLSKINDFTKNWLINFSSSSDPSFYGSGLLYYYF CCCCEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEE GNNKKIEPELLKKSEEIVDYGIENGLFAHEPDITNTIFVKQILDLSEKKDNQVQKINQTI CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH ETLFKQTTEKPENNPDFFEDLYNYVFFSIKTHPDFFKSQKDFLNTIIDYSKFVKKPIDFF HHHHHHHHCCCCCCCHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YLFKTIALLNSFYNTDKPTKINVSKQIFDNIINVKLEKNAPFFLKFINLFIKFIFKNELD HHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCC DNKEIVEFINQNLDEKNINNAEFLEHLFWYI CCHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA