Click here to switch to the map view.

The map label for this gene is 54020465

Identifier: 54020465

GI number: 54020465

Start: 402170

End: 402802

Strand: Reverse

Name: 54020465

Synonym: mhp345

Alternate gene names: NA

Gene position: 402802-402170 (Counterclockwise)

Preceding gene: 54020466

Following gene: 54020464

Centisome position: 45.12

GC content: 31.44

Gene sequence:

>633_bases
ATGTTCAAAAATATAAAAAAAATTGTTAAATTAAGGCTTGTTCCAATAGCTTCTTTACTGCCTATTTTTATTGTTTTATC
ATGCCACGATAAAAGTCAAACAGCTCCTGAAACTACCAAAAAAGATGCCCAAACTAGTCAAGAAGATAAAAATAAAGCCA
TAAAAATGGGCAATCAAGAGGCAACAAAAACTAAAAAAACTAACCGAACAATCGACTTTCATTCTGCTCCATTTAATATT
CCAAAAAAAGATAATGTCAAAATTCGAACTTTATTATTTCCAGCTGCAAGAAATGAAAATAAACTAGATAGTCAAGGTGT
TTTCCGTTTTCAATTGCATCACTCACCGGTAAAAGGTGTTACAGGAAAATGAAGCGCTTATGCTACTGAGGTAAAATCAT
TAACTGACAACACTCTAGTTGATCCTTTAAAAGTTAAGGTCGCTCGTACAACCGCAATTGAAGGTGAAAATATTGAGTTT
CCCTTAGTTTTTAGATGAGATGAGCAAGATCAGAAACTAGAAAAAGGCAAATTTTACACATTTATTTTCTGAAAAGATGA
TGGTTCAGAAAAAATTGTTTTTAATTCAAGACATATTGAGCAAAATAACGATACTTTTCAAGCAACTGAGTAA

Upstream 100 bases:

>100_bases
TAGTAATTTTAAATTTAGGGGCTATAAAATCTTATTGGTTTATTTAAATTCTTTGTTTTTCAAAGCAAAAAAATAAAAAA
CTGAGCAAAAAAGGAGAAAA

Downstream 100 bases:

>100_bases
AATTTGAAAGTTTTTCAAAATAAAAACTAAATTAGTATACTAATTTCAGACACATTAAAAAAAAGGTGTCAAAATGAAAC
AATTTAATAATAAATTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MFKNIKKIVKLRLVPIASLLPIFIVLSCHDKSQTAPETTKKDAQTSQEDKNKAIKMGNQEATKTKKTNRTIDFHSAPFNI
PKKDNVKIRTLLFPAARNENKLDSQGVFRFQLHHSPVKGVTGKWSAYATEVKSLTDNTLVDPLKVKVARTTAIEGENIEF
PLVFRWDEQDQKLEKGKFYTFIFWKDDGSEKIVFNSRHIEQNNDTFQATE

Sequences:

>Translated_210_residues
MFKNIKKIVKLRLVPIASLLPIFIVLSCHDKSQTAPETTKKDAQTSQEDKNKAIKMGNQEATKTKKTNRTIDFHSAPFNI
PKKDNVKIRTLLFPAARNENKLDSQGVFRFQLHHSPVKGVTGK*SAYATEVKSLTDNTLVDPLKVKVARTTAIEGENIEF
PLVFR*DEQDQKLEKGKFYTFIF*KDDGSEKIVFNSRHIEQNNDTFQATE
>Mature_210_residues
MFKNIKKIVKLRLVPIASLLPIFIVLSCHDKSQTAPETTKKDAQTSQEDKNKAIKMGNQEATKTKKTNRTIDFHSAPFNI
PKKDNVKIRTLLFPAARNENKLDSQGVFRFQLHHSPVKGVTGK*SAYATEVKSLTDNTLVDPLKVKVARTTAIEGENIEF
PLVFR*DEQDQKLEKGKFYTFIF*KDDGSEKIVFNSRHIEQNNDTFQATE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23484; Mature: 23484

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKNIKKIVKLRLVPIASLLPIFIVLSCHDKSQTAPETTKKDAQTSQEDKNKAIKMGNQE
CCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCH
ATKTKKTNRTIDFHSAPFNIPKKDNVKIRTLLFPAARNENKLDSQGVFRFQLHHSPVKGV
HHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCC
TGKSAYATEVKSLTDNTLVDPLKVKVARTTAIEGENIEFPLVFRDEQDQKLEKGKFYTFI
CCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCHHHHHCCCEEEEE
FKDDGSEKIVFNSRHIEQNNDTFQATE
EECCCCCEEEEECCCCCCCCCEEEECC
>Mature Secondary Structure
MFKNIKKIVKLRLVPIASLLPIFIVLSCHDKSQTAPETTKKDAQTSQEDKNKAIKMGNQE
CCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCH
ATKTKKTNRTIDFHSAPFNIPKKDNVKIRTLLFPAARNENKLDSQGVFRFQLHHSPVKGV
HHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCC
TGKSAYATEVKSLTDNTLVDPLKVKVARTTAIEGENIEFPLVFRDEQDQKLEKGKFYTFI
CCCCHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCHHHHHCCCEEEEE
FKDDGSEKIVFNSRHIEQNNDTFQATE
EECCCCCEEEEECCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA