Click here to switch to the map view.

The map label for this gene is 54020316

Identifier: 54020316

GI number: 54020316

Start: 32850

End: 33653

Strand: Reverse

Name: 54020316

Synonym: mhp027

Alternate gene names: NA

Gene position: 33653-32850 (Counterclockwise)

Preceding gene: 54020317

Following gene: 54020315

Centisome position: 3.77

GC content: 32.96

Gene sequence:

>804_bases
ATGATAAAAAATTTGAGAAAAAATTTAAAAAAAACATCTTTATTTTTCGGTATTTTTGGATTTTTAGGTATAATATTAAC
AACGAACACAACAACAGTCTCAGTTAGAAGCAAAAAAGCAAGGGCTTATTCTAATGGTTTCTCAACTCAGGAAATAATCG
CGTCTCTTTTATCGAACTCGCTCAATCCCTTTTCTATTTTAAGTGGATTTGCATTACTAAAATCAGGTATCAACGATAAA
TATGCCGAACTTAAAAATGATGATGCGGAAATGCAAGTATCTATTTTTGGAGGTCAATTTTTAATTTATTTAGGGGGATT
ATTTTGAGAGGATAAGGTATCTTGAGCAACAGATGTTGAAGTCAAATATAAACCAGGAAAACAGAAAAACAATCTTAATA
AATTAAAAAAAGTAGAGGGAAGGTTGAATGTTTGAACCTCAGGAATTGGCTCCCCCTCTTTTCAAGTAGGAGCGGAACTA
AGGTATAATGGAACTTTTATGCCAACTGCTACTGCAAAAATGGGTATTAATTTTGACACTAAGGAATTAGAAATAGTTAA
AACCGCAGATGAAAGATCGAGAGCTTTAATTAGTTTTGCAGGGGTGGGTTGAAGATACAAAATAACTTCATATGGCCAAC
ATGCAACTGGAATTGTTGAAGGTGATGAAAATTTTGCTAATGTCAACACGGAAAATACTGCGATTCTAACGCCACGCAGA
AAAAAACCTAAAACATCTTTCCAAGAATTGTTTGGCAAATATATCCAAGAAAAATACGGCCACTTAGAAGATGATATCGA
TTAA

Upstream 100 bases:

>100_bases
CTTATTTTAATTTCTAATAGAAGTGAAATTGTACAAATAATCAAATAATTAAGATAATAAGCAAAATCTAGACCAAATTC
AAACAAAAAGGGAGTCACTA

Downstream 100 bases:

>100_bases
AGATTTAAGCAAAAAGTATGCTGATAAAACGATTTTTAACAAAATTAATTTAGAAATTCCAGCAAACAAACTAACTTTTG
TATTTGGGGAATCTGGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MIKNLRKNLKKTSLFFGIFGFLGIILTTNTTTVSVRSKKARAYSNGFSTQEIIASLLSNSLNPFSILSGFALLKSGINDK
YAELKNDDAEMQVSIFGGQFLIYLGGLFWEDKVSWATDVEVKYKPGKQKNNLNKLKKVEGRLNVWTSGIGSPSFQVGAEL
RYNGTFMPTATAKMGINFDTKELEIVKTADERSRALISFAGVGWRYKITSYGQHATGIVEGDENFANVNTENTAILTPRR
KKPKTSFQELFGKYIQEKYGHLEDDID

Sequences:

>Translated_267_residues
MIKNLRKNLKKTSLFFGIFGFLGIILTTNTTTVSVRSKKARAYSNGFSTQEIIASLLSNSLNPFSILSGFALLKSGINDK
YAELKNDDAEMQVSIFGGQFLIYLGGLF*EDKVS*ATDVEVKYKPGKQKNNLNKLKKVEGRLNV*TSGIGSPSFQVGAEL
RYNGTFMPTATAKMGINFDTKELEIVKTADERSRALISFAGVG*RYKITSYGQHATGIVEGDENFANVNTENTAILTPRR
KKPKTSFQELFGKYIQEKYGHLEDDID
>Mature_267_residues
MIKNLRKNLKKTSLFFGIFGFLGIILTTNTTTVSVRSKKARAYSNGFSTQEIIASLLSNSLNPFSILSGFALLKSGINDK
YAELKNDDAEMQVSIFGGQFLIYLGGLF*EDKVS*ATDVEVKYKPGKQKNNLNKLKKVEGRLNV*TSGIGSPSFQVGAEL
RYNGTFMPTATAKMGINFDTKELEIVKTADERSRALISFAGVG*RYKITSYGQHATGIVEGDENFANVNTENTAILTPRR
KKPKTSFQELFGKYIQEKYGHLEDDID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29029; Mature: 29029

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNLRKNLKKTSLFFGIFGFLGIILTTNTTTVSVRSKKARAYSNGFSTQEIIASLLSNS
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECHHHHHHHCCCCHHHHHHHHHHCC
LNPFSILSGFALLKSGINDKYAELKNDDAEMQVSIFGGQFLIYLGGLFEDKVSATDVEVK
CCHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECCEEEEEECCHHHCCCCCCEEEEE
YKPGKQKNNLNKLKKVEGRLNVTSGIGSPSFQVGAELRYNGTFMPTATAKMGINFDTKEL
ECCCCCCCHHHHHHHHHCCEEEECCCCCCCCEECCEEEECCEECCCCHHEECCCCCCCCE
EIVKTADERSRALISFAGVGRYKITSYGQHATGIVEGDENFANVNTENTAILTPRRKKPK
EEEECCCHHHHEEEEEECCCCEEEECCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCC
TSFQELFGKYIQEKYGHLEDDID
HHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIKNLRKNLKKTSLFFGIFGFLGIILTTNTTTVSVRSKKARAYSNGFSTQEIIASLLSNS
CCCHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECHHHHHHHCCCCHHHHHHHHHHCC
LNPFSILSGFALLKSGINDKYAELKNDDAEMQVSIFGGQFLIYLGGLFEDKVSATDVEVK
CCHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECCEEEEEECCHHHCCCCCCEEEEE
YKPGKQKNNLNKLKKVEGRLNVTSGIGSPSFQVGAELRYNGTFMPTATAKMGINFDTKEL
ECCCCCCCHHHHHHHHHCCEEEECCCCCCCCEECCEEEECCEECCCCHHEECCCCCCCCE
EIVKTADERSRALISFAGVGRYKITSYGQHATGIVEGDENFANVNTENTAILTPRRKKPK
EEEECCCHHHHEEEEEECCCCEEEECCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCC
TSFQELFGKYIQEKYGHLEDDID
HHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA