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The map label for this gene is napA

Identifier: 54020207

GI number: 54020207

Start: 565452

End: 565889

Strand: Direct

Name: napA

Synonym: mhp456

Alternate gene names: NA

Gene position: 565452-565889 (Clockwise)

Preceding gene: 54020206

Following gene: 54020208

Centisome position: 63.34

GC content: 26.26

Gene sequence:

>438_bases
ATGATAAAAACACTAGAGCAATTACAGTCAAGTTTAACTATTTTTTATACAAATGTTAAAAATTTTCATTGAAATCTCCA
GGATAAAGACTTTTTGGTGCTTCATAAATTTAGTGATAAATTAGCACAAAAAACCAATAATTTTATTGATGATATTGCAG
AAAAGCTCCGATCATTTGGAAAAATTGCGCTTGCTAATTTTGAAGAAATTATCCAGAATTCTGATTTTGAATTATTTAAA
TCCCAAATTTGATGTTCTGATGAAGTATTAGGTAAATTGGCAGAGCAGATTAAAAAAATTCTTGAAATTTGCGGGGAAAT
TCAAGAAGATGGCGATGAAGATAAAATTGGTTATTTAATTTATCCGCTAATTGATGAAATAATTCTTTACTATCACAAAG
AATTATGAAAAATTTATGCTCAAAAATCAAATTCTTAA

Upstream 100 bases:

>100_bases
ATCGTTCACTCAATCGGACAACAGGGAGAATCGAAAGATTTCGTCGTATGGCAGCAAAAGCGCATAAAAAAACAAAAAAA
TAAGAAAAAAACAATTAAGA

Downstream 100 bases:

>100_bases
TTTTATTTGGGATCAAGAAGATATCCGCATTGATATTTTAGTAGCAAAATTAGCTAATTTATCACGAAAAGTTGCTCAAG
ATTTAATTTTAGAGAAAAAA

Product: neutrophil activating factor

Products: NA

Alternate protein names: Neutrophil Activating Protein

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MIKTLEQLQSSLTIFYTNVKNFHWNLQDKDFLVLHKFSDKLAQKTNNFIDDIAEKLRSFGKIALANFEEIIQNSDFELFK
SQIWCSDEVLGKLAEQIKKILEICGEIQEDGDEDKIGYLIYPLIDEIILYYHKELWKIYAQKSNS

Sequences:

>Translated_145_residues
MIKTLEQLQSSLTIFYTNVKNFH*NLQDKDFLVLHKFSDKLAQKTNNFIDDIAEKLRSFGKIALANFEEIIQNSDFELFK
SQI*CSDEVLGKLAEQIKKILEICGEIQEDGDEDKIGYLIYPLIDEIILYYHKEL*KIYAQKSNS
>Mature_145_residues
MIKTLEQLQSSLTIFYTNVKNFH*NLQDKDFLVLHKFSDKLAQKTNNFIDDIAEKLRSFGKIALANFEEIIQNSDFELFK
SQI*CSDEVLGKLAEQIKKILEICGEIQEDGDEDKIGYLIYPLIDEIILYYHKEL*KIYAQKSNS

Specific function: Unknown

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16489; Mature: 16489

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTLEQLQSSLTIFYTNVKNFHNLQDKDFLVLHKFSDKLAQKTNNFIDDIAEKLRSFGK
CCCHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALANFEEIIQNSDFELFKSQICSDEVLGKLAEQIKKILEICGEIQEDGDEDKIGYLIYP
HHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LIDEIILYYHKELKIYAQKSNS
HHHHHHHHHHHHHHHEEECCCC
>Mature Secondary Structure
MIKTLEQLQSSLTIFYTNVKNFHNLQDKDFLVLHKFSDKLAQKTNNFIDDIAEKLRSFGK
CCCHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALANFEEIIQNSDFELFKSQICSDEVLGKLAEQIKKILEICGEIQEDGDEDKIGYLIYP
HHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
LIDEIILYYHKELKIYAQKSNS
HHHHHHHHHHHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA