Definition | Mycoplasma hyopneumoniae 232, complete genome. |
---|---|
Accession | NC_006360 |
Length | 892,758 |
Click here to switch to the map view.
The map label for this gene is 54020201
Identifier: 54020201
GI number: 54020201
Start: 510321
End: 511217
Strand: Direct
Name: 54020201
Synonym: mhp432
Alternate gene names: NA
Gene position: 510321-511217 (Clockwise)
Preceding gene: 54020200
Following gene: 54020202
Centisome position: 57.16
GC content: 27.54
Gene sequence:
>897_bases ATGTCAGAAAATAACAACTCGTATTTATCGACTAAGCTTGACCATTTTTCGGCCTGAAAAAAAGAGCGGAAAATTGCTCT AATTTTTTCTTTGATTATTCTTGGAATCACCTTTTTTCTGGTGGGTTATGGAATGATTAATAATCGCCAAGAATTTGTGG TTGATAAATTTTATTTTATTAGTTTTAGTAATTATTTCCAAAATTTTAGTGTTTTTTTCTATCTAACTTACCAGTCAAAT CTCATTTATGGACTTGTTTTATTTAGTTTTGTCCTAAATCCTTCAAGGCTAAAATTCCAATTTTTATTTGTTTTTACAGT GATTTTAACTATTGTTTTAATTGTTTTTTGAACCGTAATTGCCTGAAATTTACATATGGATATTACTTTTTTGCTAAAAA CTTCAACTGTCCATTTTTTTCATCCCGTTTTTTCAATTTTTGTGCTTTTTTGGTTTCGCAAAGAATTTATGGTCAATCAT CTTGGTCTAAGTCTTGCTGTTATTTATTCTGTTTGTTATTATTTATTTTGTCTGCTTTTATATTTTTTTACAATTAGACA GTGAATTAGTCCTGAATTTAAGGTAAATAATGAAAATATCCCAGAAAAAAGGTCAGTTTTTTTCTATACAGGACTAACAA TTTATCCCTTTCTTAACTTTTTACACCCATTTTTTTATTCAGGTGATAATCATTCAATGGTGATTCTACTTAATTTGCTA ATGAGTTTCTCAGTTGTATTGCTTCCTTATTGAATTTCGCTTTTCTACATTAATGTTTTTGGAATCAAAGCACTAAATTG AAGCTTTTTTGCCTGGATTAAATCGCTTTTTATTCGCTTAAAAAACTTTTTTTGGGTTGCAAAACCAAAAAAAGAAGAAA ATTTTGGAGAAAAATAG
Upstream 100 bases:
>100_bases TTATTTCAATTAAAAATATGGACCTTTTTAATTGAAATAAGATTTTTTTCTATTTTTAAGTTTTTTAGTGTATAATATTA TTTTATTATTTCTCTCTATT
Downstream 100 bases:
>100_bases TGGCAAAAATCGTTGTAGGACTTTCCGGTGGGGTTGATTCAGCAGTGAGTGCTTATCTTTTAAAAAAAGCTGGTCATAAT GTGATTGCAGTTTTTATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSENNNSYLSTKLDHFSAWKKERKIALIFSLIILGITFFLVGYGMINNRQEFVVDKFYFISFSNYFQNFSVFFYLTYQSN LIYGLVLFSFVLNPSRLKFQFLFVFTVILTIVLIVFWTVIAWNLHMDITFLLKTSTVHFFHPVFSIFVLFWFRKEFMVNH LGLSLAVIYSVCYYLFCLLLYFFTIRQWISPEFKVNNENIPEKRSVFFYTGLTIYPFLNFLHPFFYSGDNHSMVILLNLL MSFSVVLLPYWISLFYINVFGIKALNWSFFAWIKSLFIRLKNFFWVAKPKKEENFGEK
Sequences:
>Translated_298_residues MSENNNSYLSTKLDHFSA*KKERKIALIFSLIILGITFFLVGYGMINNRQEFVVDKFYFISFSNYFQNFSVFFYLTYQSN LIYGLVLFSFVLNPSRLKFQFLFVFTVILTIVLIVF*TVIA*NLHMDITFLLKTSTVHFFHPVFSIFVLFWFRKEFMVNH LGLSLAVIYSVCYYLFCLLLYFFTIRQ*ISPEFKVNNENIPEKRSVFFYTGLTIYPFLNFLHPFFYSGDNHSMVILLNLL MSFSVVLLPY*ISLFYINVFGIKALN*SFFAWIKSLFIRLKNFFWVAKPKKEENFGEK >Mature_297_residues SENNNSYLSTKLDHFSA*KKERKIALIFSLIILGITFFLVGYGMINNRQEFVVDKFYFISFSNYFQNFSVFFYLTYQSNL IYGLVLFSFVLNPSRLKFQFLFVFTVILTIVLIVF*TVIA*NLHMDITFLLKTSTVHFFHPVFSIFVLFWFRKEFMVNHL GLSLAVIYSVCYYLFCLLLYFFTIRQ*ISPEFKVNNENIPEKRSVFFYTGLTIYPFLNFLHPFFYSGDNHSMVILLNLLM SFSVVLLPY*ISLFYINVFGIKALN*SFFAWIKSLFIRLKNFFWVAKPKKEENFGEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34576; Mature: 34445
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS01143 RIBOSOMAL_L31
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENNNSYLSTKLDHFSAKKERKIALIFSLIILGITFFLVGYGMINNRQEFVVDKFYFIS CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEE FSNYFQNFSVFFYLTYQSNLIYGLVLFSFVLNPSRLKFQFLFVFTVILTIVLIVFTVIAN HHHHHCCEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LHMDITFLLKTSTVHFFHPVFSIFVLFWFRKEFMVNHLGLSLAVIYSVCYYLFCLLLYFF HCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIRQISPEFKVNNENIPEKRSVFFYTGLTIYPFLNFLHPFFYSGDNHSMVILLNLLMSFS HHHHCCCCCEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VVLLPYISLFYINVFGIKALNSFFAWIKSLFIRLKNFFWVAKPKKEENFGEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCC >Mature Secondary Structure SENNNSYLSTKLDHFSAKKERKIALIFSLIILGITFFLVGYGMINNRQEFVVDKFYFIS CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEE FSNYFQNFSVFFYLTYQSNLIYGLVLFSFVLNPSRLKFQFLFVFTVILTIVLIVFTVIAN HHHHHCCEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LHMDITFLLKTSTVHFFHPVFSIFVLFWFRKEFMVNHLGLSLAVIYSVCYYLFCLLLYFF HCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIRQISPEFKVNNENIPEKRSVFFYTGLTIYPFLNFLHPFFYSGDNHSMVILLNLLMSFS HHHHCCCCCEECCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VVLLPYISLFYINVFGIKALNSFFAWIKSLFIRLKNFFWVAKPKKEENFGEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA