Definition | Mycoplasma hyopneumoniae 232, complete genome. |
---|---|
Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is potA
Identifier: 54020171
GI number: 54020171
Start: 452886
End: 455063
Strand: Direct
Name: potA
Synonym: mhp380
Alternate gene names: 54020171
Gene position: 452886-455063 (Clockwise)
Preceding gene: 54020170
Following gene: 54020172
Centisome position: 50.73
GC content: 30.35
Gene sequence:
>2178_bases ATGAAAAAAGATAATGAAAATCTAGACTATCAAAATGCTGATTTTGAATATGAAATTAAAAAAATTCGGCAGGCGGCCGA AAATCGTTATAAGTCAAAATCTTTGATTCCAGCAATTGAAATCAAAGATCTAACCATTGATTTTGGTGAAACACTTGCAG TTGATAAGGCTAATCTTAAAATTTTTAAAGGCGAACTTGTCACCCTTTTAGGGCCTTCAGGGTCTGGAAAAACAACGATT TTAAACGCAATTGCCGGCCTTTTAAAACCCACTTCGGGCCAGATTATTTTTAATGGGGATGATGTAACTAGAAAATCACC TCAACAAAGAAAAATTGGACTTGTTTTTCAAAATTATGCACTTTATCCACATTTAAATGTTTTTGGAAACATCGCTTTTT CACTTCATAATGACCCAAGATGAAAACAACGAGCCCTTGAAAAATCTATGCACGCCCAGGTAAATGCTAATTCGATTGTT TTAGCAAAAAATGGTGCTTCCCTTGAAGAACTTGAAAAGTATAAGGCACTTTTATTTGATTATTTTAATGTTTATCGCCA GTTAGAGCATGACTATAGCGAGCTTAAAACTGAAATGTATCTTGGCCTAAACCAGCTCAAATCAGATTATATTTTAATTG ATGCCCATAAACAATCAGAAATTAAAAATCTAACAATTGATTTTCTAAAACTAGGTAGATCAGCATCAATTTTTTGAGCA ATTTTAAAGAAAATTTTCAAGAAGAATCAAAATCAAACCTGTCCAATCCAACAGGCAATTTCTTATCGGAAAGCTTATAA ATTAAAGCTAAAAAAAATCAGAGAAAAAGCAAAGGCTGATAAAAAGGACTATAAAAACCGAATTATTCAGGAAAAATATG CAATTAAATATGCCCCTGAATTAGTCAAGGCCCGTAAAATTTTTCTTGAAGAAAAATCACAATTATTTGAAAAATTAGAA AATCTTGAAAATTTATATAAAAAATTTAAATTAAATGCGAAGTTAGAATTAACAAAAATCAAAAAAGGTTATAAAAAATT TCGTACTAAAACGAAACTAAAAGATGAAGAATCACTAAATCTTGACTATCAAGAACAAATTGAAGCCTTCAATTTTCAAA AAAAAGAAAAAGAATTATGATTTAAAACCCAAATTCAAACCGAAAAAGCATTAATTAAAAATGAGAAAAAACTCGAAAAA CTAGAGCAAAATTACATTGAAAACAAGAAAAAATTTCTAGAAAATAACAGAGCTGAATCACCAAACTTATTACTTTTAAA ATCACTTAAACAAAAAATTAAAAGTTATAAAGCCCAAACTTTAAAACGGTTTTTAGAATGAGAAAAAAACTTGATTAGTA AATTTTCCCTTAATATCGAAAAATTATCAGAAACTGAACTAAAAGAATACCAGGAATATAAATCAAAAAATATTTCGATT AAGGAAGCAATAAATCAGGCCGTACTTCAGACAGCCGAAAAAGTTGAAATCACCAAAAATCTGGCTAAAAAACCGACAAA ATTATCAGGAGGTCAGCAACAAAGAGTTGCGATCGCCCGCGGAATCGTCCGTCATCCTGATATTTTGTTAATGGATGAGC CACTTTCAAATTTAGATGCAAAACTGCGAGTCCAAACAAGGCAATGAATTAGAAAAATCCAGACAGAAATCGGGATTACA ACTGTTTTTGTTACCCACGACCAAGAAGAGGCAATGTCAATTTCAGATAGAATAATTTGTATGTCAACTGGTTATATTCA ACAAATCGGGACTCCAACTGAGTTATATCATAAACCTAAAAATGAATTTGTTGCTTCTTTTTTAGGTGTTCCAGAAATGA ATATTTTTGATGCTTTCTATGATCAAAAAAGTAAACGCGTTGTTATTGACAATCAAGTAATTTACGAGAATTTAGAAAAT TATCCCTATGAAAAAATCAGAGCCGGAATTCGCGCTGAGCATCTAATTGAAGATGCAAATGGCAATTTTTTTGGAAAAAT TGCTGCAATTGAATATCTCGGAAAAGATATCCAAGGGAAAATTGAAATTACAAATTTAGGTCTTTTTTCGATTATTTTAA AGAAAAAACCAACCTATGAAATCGGCGAAATTATCCAGTTTAGCTTTAAAAATGGCAAATTACATTTATTTGATTATCAA ACAAGGGAAAGGATCTAA
Upstream 100 bases:
>100_bases AATTTTTTAGTTTTAGGAGATAAAAATAAGAATAAAAATGTTGTTGACTGGTATGAATTTGGTCGAGAATTAAAGGAAAA AAAATAAAAAACGGAAAAAA
Downstream 100 bases:
>100_bases TGAATTTTATCAGCGGTTTTTTTTATAAAAGACGGATTCGCAAATCGCGTTTAGAACTAGGGATTCTCGATCAAAAACAC CCGTTTTGAAAGCCTTTTTT
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 725; Mature: 725
Protein sequence:
>725_residues MKKDNENLDYQNADFEYEIKKIRQAAENRYKSKSLIPAIEIKDLTIDFGETLAVDKANLKIFKGELVTLLGPSGSGKTTI LNAIAGLLKPTSGQIIFNGDDVTRKSPQQRKIGLVFQNYALYPHLNVFGNIAFSLHNDPRWKQRALEKSMHAQVNANSIV LAKNGASLEELEKYKALLFDYFNVYRQLEHDYSELKTEMYLGLNQLKSDYILIDAHKQSEIKNLTIDFLKLGRSASIFWA ILKKIFKKNQNQTCPIQQAISYRKAYKLKLKKIREKAKADKKDYKNRIIQEKYAIKYAPELVKARKIFLEEKSQLFEKLE NLENLYKKFKLNAKLELTKIKKGYKKFRTKTKLKDEESLNLDYQEQIEAFNFQKKEKELWFKTQIQTEKALIKNEKKLEK LEQNYIENKKKFLENNRAESPNLLLLKSLKQKIKSYKAQTLKRFLEWEKNLISKFSLNIEKLSETELKEYQEYKSKNISI KEAINQAVLQTAEKVEITKNLAKKPTKLSGGQQQRVAIARGIVRHPDILLMDEPLSNLDAKLRVQTRQWIRKIQTEIGIT TVFVTHDQEEAMSISDRIICMSTGYIQQIGTPTELYHKPKNEFVASFLGVPEMNIFDAFYDQKSKRVVIDNQVIYENLEN YPYEKIRAGIRAEHLIEDANGNFFGKIAAIEYLGKDIQGKIEITNLGLFSIILKKKPTYEIGEIIQFSFKNGKLHLFDYQ TRERI
Sequences:
>Translated_725_residues MKKDNENLDYQNADFEYEIKKIRQAAENRYKSKSLIPAIEIKDLTIDFGETLAVDKANLKIFKGELVTLLGPSGSGKTTI LNAIAGLLKPTSGQIIFNGDDVTRKSPQQRKIGLVFQNYALYPHLNVFGNIAFSLHNDPR*KQRALEKSMHAQVNANSIV LAKNGASLEELEKYKALLFDYFNVYRQLEHDYSELKTEMYLGLNQLKSDYILIDAHKQSEIKNLTIDFLKLGRSASIF*A ILKKIFKKNQNQTCPIQQAISYRKAYKLKLKKIREKAKADKKDYKNRIIQEKYAIKYAPELVKARKIFLEEKSQLFEKLE NLENLYKKFKLNAKLELTKIKKGYKKFRTKTKLKDEESLNLDYQEQIEAFNFQKKEKEL*FKTQIQTEKALIKNEKKLEK LEQNYIENKKKFLENNRAESPNLLLLKSLKQKIKSYKAQTLKRFLE*EKNLISKFSLNIEKLSETELKEYQEYKSKNISI KEAINQAVLQTAEKVEITKNLAKKPTKLSGGQQQRVAIARGIVRHPDILLMDEPLSNLDAKLRVQTRQ*IRKIQTEIGIT TVFVTHDQEEAMSISDRIICMSTGYIQQIGTPTELYHKPKNEFVASFLGVPEMNIFDAFYDQKSKRVVIDNQVIYENLEN YPYEKIRAGIRAEHLIEDANGNFFGKIAAIEYLGKDIQGKIEITNLGLFSIILKKKPTYEIGEIIQFSFKNGKLHLFDYQ TRERI >Mature_725_residues MKKDNENLDYQNADFEYEIKKIRQAAENRYKSKSLIPAIEIKDLTIDFGETLAVDKANLKIFKGELVTLLGPSGSGKTTI LNAIAGLLKPTSGQIIFNGDDVTRKSPQQRKIGLVFQNYALYPHLNVFGNIAFSLHNDPR*KQRALEKSMHAQVNANSIV LAKNGASLEELEKYKALLFDYFNVYRQLEHDYSELKTEMYLGLNQLKSDYILIDAHKQSEIKNLTIDFLKLGRSASIF*A ILKKIFKKNQNQTCPIQQAISYRKAYKLKLKKIREKAKADKKDYKNRIIQEKYAIKYAPELVKARKIFLEEKSQLFEKLE NLENLYKKFKLNAKLELTKIKKGYKKFRTKTKLKDEESLNLDYQEQIEAFNFQKKEKEL*FKTQIQTEKALIKNEKKLEK LEQNYIENKKKFLENNRAESPNLLLLKSLKQKIKSYKAQTLKRFLE*EKNLISKFSLNIEKLSETELKEYQEYKSKNISI KEAINQAVLQTAEKVEITKNLAKKPTKLSGGQQQRVAIARGIVRHPDILLMDEPLSNLDAKLRVQTRQ*IRKIQTEIGIT TVFVTHDQEEAMSISDRIICMSTGYIQQIGTPTELYHKPKNEFVASFLGVPEMNIFDAFYDQKSKRVVIDNQVIYENLEN YPYEKIRAGIRAEHLIEDANGNFFGKIAAIEYLGKDIQGKIEITNLGLFSIILKKKPTYEIGEIIQFSFKNGKLHLFDYQ TRERI
Specific function: Part Of The Binding-Protein-Dependent Transport System For Sn-Glycerol-3-Phosphate. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG3839
COG function: function code G; ABC-type sugar transport systems, ATPase components
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI87082267, Length=252, Percent_Identity=37.3015873015873, Blast_Score=166, Evalue=6e-42, Organism=Escherichia coli, GI1790467, Length=221, Percent_Identity=41.1764705882353, Blast_Score=162, Evalue=1e-40, Organism=Escherichia coli, GI1787370, Length=214, Percent_Identity=41.1214953271028, Blast_Score=147, Evalue=2e-36, Organism=Escherichia coli, GI1787712, Length=143, Percent_Identity=46.8531468531469, Blast_Score=134, Evalue=3e-32, Organism=Escherichia coli, GI87081709, Length=114, Percent_Identity=50.8771929824561, Blast_Score=125, Evalue=6e-30, Organism=Escherichia coli, GI87081791, Length=229, Percent_Identity=33.1877729257642, Blast_Score=119, Evalue=5e-28, Organism=Escherichia coli, GI1788761, Length=127, Percent_Identity=43.3070866141732, Blast_Score=116, Evalue=5e-27, Organism=Escherichia coli, GI1789032, Length=115, Percent_Identity=44.3478260869565, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1788450, Length=113, Percent_Identity=39.8230088495575, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1787500, Length=153, Percent_Identity=30.0653594771242, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1789962, Length=139, Percent_Identity=33.0935251798561, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1789672, Length=127, Percent_Identity=39.3700787401575, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI1788644, Length=106, Percent_Identity=40.5660377358491, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI145693107, Length=142, Percent_Identity=32.3943661971831, Blast_Score=83, Evalue=8e-17, Organism=Escherichia coli, GI1787029, Length=114, Percent_Identity=38.5964912280702, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI1787164, Length=82, Percent_Identity=45.1219512195122, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI1786253, Length=94, Percent_Identity=40.4255319148936, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1787089, Length=105, Percent_Identity=39.0476190476191, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI48994997, Length=114, Percent_Identity=36.8421052631579, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790162, Length=121, Percent_Identity=36.3636363636364, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1786872, Length=123, Percent_Identity=34.1463414634146, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI87081782, Length=96, Percent_Identity=41.6666666666667, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1788225, Length=104, Percent_Identity=41.3461538461538, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1786563, Length=98, Percent_Identity=41.8367346938776, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1789864, Length=103, Percent_Identity=34.9514563106796, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1789586, Length=102, Percent_Identity=31.3725490196078, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1786398, Length=104, Percent_Identity=35.5769230769231, Blast_Score=71, Evalue=3e-13, Organism=Escherichia coli, GI1789891, Length=86, Percent_Identity=39.5348837209302, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1790544, Length=157, Percent_Identity=28.6624203821656, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1787758, Length=108, Percent_Identity=32.4074074074074, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788506, Length=182, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI48994943, Length=95, Percent_Identity=37.8947368421053, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1789873, Length=103, Percent_Identity=34.9514563106796, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1786981, Length=100, Percent_Identity=34, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI48994883, Length=142, Percent_Identity=27.4647887323944, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1787759, Length=147, Percent_Identity=27.2108843537415, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1789963, Length=109, Percent_Identity=31.1926605504587, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI24666092, Length=97, Percent_Identity=36.0824742268041, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI221500365, Length=182, Percent_Identity=26.3736263736264, Blast_Score=66, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR008995 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 83484; Mature: 83484
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDNENLDYQNADFEYEIKKIRQAAENRYKSKSLIPAIEIKDLTIDFGETLAVDKANLK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCEEEEECCCCE IFKGELVTLLGPSGSGKTTILNAIAGLLKPTSGQIIFNGDDVTRKSPQQRKIGLVFQNYA EEECCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHCCEEEECCC LYPHLNVFGNIAFSLHNDPRKQRALEKSMHAQVNANSIVLAKNGASLEELEKYKALLFDY CCCCHHHHCCEEEEECCCHHHHHHHHHHHHCEECCCEEEEEECCCCHHHHHHHHHHHHHH FNVYRQLEHDYSELKTEMYLGLNQLKSDYILIDAHKQSEIKNLTIDFLKLGRSASIFAIL HHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHH KKIFKKNQNQTCPIQQAISYRKAYKLKLKKIREKAKADKKDYKNRIIQEKYAIKYAPELV HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KARKIFLEEKSQLFEKLENLENLYKKFKLNAKLELTKIKKGYKKFRTKTKLKDEESLNLD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCC YQEQIEAFNFQKKEKELFKTQIQTEKALIKNEKKLEKLEQNYIENKKKFLENNRAESPNL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH LLLKSLKQKIKSYKAQTLKRFLEEKNLISKFSLNIEKLSETELKEYQEYKSKNISIKEAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHH NQAVLQTAEKVEITKNLAKKPTKLSGGQQQRVAIARGIVRHPDILLMDEPLSNLDAKLRV HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHH QTRQIRKIQTEIGITTVFVTHDQEEAMSISDRIICMSTGYIQQIGTPTELYHKPKNEFVA HHHHHHHHHHHCCEEEEEEECCHHHHHHHCCEEEEEECCHHHHCCCCHHHHHCCHHHHHH SFLGVPEMNIFDAFYDQKSKRVVIDNQVIYENLENYPYEKIRAGIRAEHLIEDANGNFFG HHHCCCCCHHHHHHHCCCCCEEEECCHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCEEE KIAAIEYLGKDIQGKIEITNLGLFSIILKKKPTYEIGEIIQFSFKNGKLHLFDYQTRERI HHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCCHHHHHEEEECCCEEEEEECHHHCCC >Mature Secondary Structure MKKDNENLDYQNADFEYEIKKIRQAAENRYKSKSLIPAIEIKDLTIDFGETLAVDKANLK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCEEEEECCCCE IFKGELVTLLGPSGSGKTTILNAIAGLLKPTSGQIIFNGDDVTRKSPQQRKIGLVFQNYA EEECCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHCCEEEECCC LYPHLNVFGNIAFSLHNDPRKQRALEKSMHAQVNANSIVLAKNGASLEELEKYKALLFDY CCCCHHHHCCEEEEECCCHHHHHHHHHHHHCEECCCEEEEEECCCCHHHHHHHHHHHHHH FNVYRQLEHDYSELKTEMYLGLNQLKSDYILIDAHKQSEIKNLTIDFLKLGRSASIFAIL HHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHH KKIFKKNQNQTCPIQQAISYRKAYKLKLKKIREKAKADKKDYKNRIIQEKYAIKYAPELV HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KARKIFLEEKSQLFEKLENLENLYKKFKLNAKLELTKIKKGYKKFRTKTKLKDEESLNLD HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCC YQEQIEAFNFQKKEKELFKTQIQTEKALIKNEKKLEKLEQNYIENKKKFLENNRAESPNL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCH LLLKSLKQKIKSYKAQTLKRFLEEKNLISKFSLNIEKLSETELKEYQEYKSKNISIKEAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHH NQAVLQTAEKVEITKNLAKKPTKLSGGQQQRVAIARGIVRHPDILLMDEPLSNLDAKLRV HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHH QTRQIRKIQTEIGITTVFVTHDQEEAMSISDRIICMSTGYIQQIGTPTELYHKPKNEFVA HHHHHHHHHHHCCEEEEEEECCHHHHHHHCCEEEEEECCHHHHCCCCHHHHHCCHHHHHH SFLGVPEMNIFDAFYDQKSKRVVIDNQVIYENLENYPYEKIRAGIRAEHLIEDANGNFFG HHHCCCCCHHHHHHHCCCCCEEEECCHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCEEE KIAAIEYLGKDIQGKIEITNLGLFSIILKKKPTYEIGEIIQFSFKNGKLHLFDYQTRERI HHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCCCHHHHHEEEECCCEEEEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7569993 [H]