Definition | Mycoplasma hyopneumoniae 232, complete genome. |
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Accession | NC_006360 |
Length | 892,758 |
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The map label for this gene is 54020120
Identifier: 54020120
GI number: 54020120
Start: 304924
End: 305523
Strand: Direct
Name: 54020120
Synonym: mhp273
Alternate gene names: NA
Gene position: 304924-305523 (Clockwise)
Preceding gene: 54020119
Following gene: 54020121
Centisome position: 34.16
GC content: 25.5
Gene sequence:
>600_bases ATGAACAAGATTAGTCTATGAATTAATAAAATTGAGCTAAATCTTCAAAGATACGAAAATGTTGTTCAGAATTTATATAC AATTGCAATTGCTTATAGTCAAACTGAAAAAATATTTGCAATTAGACCTAATTTGCTTGATTTTCCGCACGGGATAGGTC TAAGAAAAATACCATTCTTAAAAAACTGACCGACAAAAAAAATTCTTACTTTGATTTATAATGGGAAATTACAGCAAAAA TTCATCAGTTTTCAAAAATGAGATTTGCAAAAAAACCGTAGTTTATTAAATCAAATTAAAGCAAAATTGTTAGTATGGGA GTACTATCTTGGTTTTCTAGAAGGAAATTATAAACAAACACTAGTGCTTCAAGAAGTTTTATATACAAAAAAACTTTATT TTTTTAGAGGTTTAGTTTGAAATAATGAAAAATATACAATGATTGTCGGGCTTAATAAATTCCAAGGTAATAAAATTTAT GCAACTGAGTATTGTTCATTTTTTACTGCGCTTTTAACTTCAAAAGCAATTAGCCAAAAAGCTGAAAAATTTGATAAAAT TTCTCAGATTAATAAAATTTGGTATAATTTCCAAAAATAA
Upstream 100 bases:
>100_bases CTAAAAGTTTCTAATTTTTCGTTTTTTATTGCCTTTGCCTAATTTTTCCTTAAATTTGATAAACTGATTATTAAAGGATT TTTTTATTTTATAATAGCAG
Downstream 100 bases:
>100_bases TATTTTTAGATAATTTTTCATAAATTTTTTAAGTTTAAAAAATTTATATAGCTATAAAAAAGCTAATAATCTAAATTTTT AACAAAAAGTACAAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MNKISLWINKIELNLQRYENVVQNLYTIAIAYSQTEKIFAIRPNLLDFPHGIGLRKIPFLKNWPTKKILTLIYNGKLQQK FISFQKWDLQKNRSLLNQIKAKLLVWEYYLGFLEGNYKQTLVLQEVLYTKKLYFFRGLVWNNEKYTMIVGLNKFQGNKIY ATEYCSFFTALLTSKAISQKAEKFDKISQINKIWYNFQK
Sequences:
>Translated_199_residues MNKISL*INKIELNLQRYENVVQNLYTIAIAYSQTEKIFAIRPNLLDFPHGIGLRKIPFLKN*PTKKILTLIYNGKLQQK FISFQK*DLQKNRSLLNQIKAKLLVWEYYLGFLEGNYKQTLVLQEVLYTKKLYFFRGLV*NNEKYTMIVGLNKFQGNKIY ATEYCSFFTALLTSKAISQKAEKFDKISQINKIWYNFQK >Mature_199_residues MNKISL*INKIELNLQRYENVVQNLYTIAIAYSQTEKIFAIRPNLLDFPHGIGLRKIPFLKN*PTKKILTLIYNGKLQQK FISFQK*DLQKNRSLLNQIKAKLLVWEYYLGFLEGNYKQTLVLQEVLYTKKLYFFRGLV*NNEKYTMIVGLNKFQGNKIY ATEYCSFFTALLTSKAISQKAEKFDKISQINKIWYNFQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22989; Mature: 22989
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKISLINKIELNLQRYENVVQNLYTIAIAYSQTEKIFAIRPNLLDFPHGIGLRKIPFLK CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC NPTKKILTLIYNGKLQQKFISFQKDLQKNRSLLNQIKAKLLVWEYYLGFLEGNYKQTLVL CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH QEVLYTKKLYFFRGLVNNEKYTMIVGLNKFQGNKIYATEYCSFFTALLTSKAISQKAEKF HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH DKISQINKIWYNFQK HHHHHHHHHHHCCCC >Mature Secondary Structure MNKISLINKIELNLQRYENVVQNLYTIAIAYSQTEKIFAIRPNLLDFPHGIGLRKIPFLK CCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC NPTKKILTLIYNGKLQQKFISFQKDLQKNRSLLNQIKAKLLVWEYYLGFLEGNYKQTLVL CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH QEVLYTKKLYFFRGLVNNEKYTMIVGLNKFQGNKIYATEYCSFFTALLTSKAISQKAEKF HHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH DKISQINKIWYNFQK HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA