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The map label for this gene is smf [H]

Identifier: 54020048

GI number: 54020048

Start: 151217

End: 152011

Strand: Direct

Name: smf [H]

Synonym: mhp130

Alternate gene names: 54020048

Gene position: 151217-152011 (Clockwise)

Preceding gene: 54020047

Following gene: 54020049

Centisome position: 16.94

GC content: 28.3

Gene sequence:

>795_bases
ATGAAAGGAAGGGAAATGAAGAGCAGTCTAATTTACTATGCCATTAAATATAAAGGAGATTATAAATTAATCCAGAATGC
TATCCAAACAAAAGAGGAAATAACAAAAGAAGAATTTTTAAAACTTCAAGAAAAACTTGATTCAGGAAAAATAAAAGCAA
TTACAATATTAGATGAAAACTATCCTGAAGCCTTTCAAGTACTAAAAAATCCGCCTTATGTTCTATTTTATCAAGGTAAA
ATTGAATTTCTTGAAAATAAAAATCCAAAAAGCGCGCTTATTGGCGAAAAATATAATAGTAAAATTCAGGAATTTTTTAA
CAAATCATTAGATCAAATTATCAAGCGTCATATTTTAGTTACAAACGGTTATAAAGGTGTTGAGCAAAAAATAATGGAAT
ATTACCGATTATATGAAGCGCCTATTATCGCTGTTTCGGCAAATGGGATAAAAAATCCATGACCTTTTGAGAATTTTCAG
GATTATAAAAATATTTTAATTATCTCTGAATATCCAACAGGATGCAATGTTAATAAAAAAAGATTAATTGAAAGGAACCG
TTTAGTTGCAGCGCTTGCTAATTTTTTAGTTGTCTATTCAATTCGGAAATCAGGTGGATCACAAAATTTAGTTAACTATT
TTCTTGATTTTGGTAAGGAAATTTATTGCTTTTTTGATAAAAATGATGAAGATCAACTCGATTATACAGGTTGTTCTGAT
CTAATTTATCAAGGCGCAAATTGAATTACCGAAATAAAAGATGTCTATTATGAGAGTCAAACTAGAGGAGAATAA

Upstream 100 bases:

>100_bases
AATAATTTCTTTTCTTTGATTTCAAAAAAAGACATAAAAAAAACTTTTTATATTAAAAGTTTTTTTTATTAAATAAAAAC
TAAATTTTCTTAATTTATAA

Downstream 100 bases:

>100_bases
TGTATATTTTAAGTTTATTTGAGGATGTCCAAGTGGGTGCAGAGCTATCAACATTAGCTACCACTTTACAAAAATGAATA
AAATATCTAACACAGATCGG

Product: DNA processing protein SMF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MKGREMKSSLIYYAIKYKGDYKLIQNAIQTKEEITKEEFLKLQEKLDSGKIKAITILDENYPEAFQVLKNPPYVLFYQGK
IEFLENKNPKSALIGEKYNSKIQEFFNKSLDQIIKRHILVTNGYKGVEQKIMEYYRLYEAPIIAVSANGIKNPWPFENFQ
DYKNILIISEYPTGCNVNKKRLIERNRLVAALANFLVVYSIRKSGGSQNLVNYFLDFGKEIYCFFDKNDEDQLDYTGCSD
LIYQGANWITEIKDVYYESQTRGE

Sequences:

>Translated_264_residues
MKGREMKSSLIYYAIKYKGDYKLIQNAIQTKEEITKEEFLKLQEKLDSGKIKAITILDENYPEAFQVLKNPPYVLFYQGK
IEFLENKNPKSALIGEKYNSKIQEFFNKSLDQIIKRHILVTNGYKGVEQKIMEYYRLYEAPIIAVSANGIKNP*PFENFQ
DYKNILIISEYPTGCNVNKKRLIERNRLVAALANFLVVYSIRKSGGSQNLVNYFLDFGKEIYCFFDKNDEDQLDYTGCSD
LIYQGAN*ITEIKDVYYESQTRGE
>Mature_264_residues
MKGREMKSSLIYYAIKYKGDYKLIQNAIQTKEEITKEEFLKLQEKLDSGKIKAITILDENYPEAFQVLKNPPYVLFYQGK
IEFLENKNPKSALIGEKYNSKIQEFFNKSLDQIIKRHILVTNGYKGVEQKIMEYYRLYEAPIIAVSANGIKNP*PFENFQ
DYKNILIISEYPTGCNVNKKRLIERNRLVAALANFLVVYSIRKSGGSQNLVNYFLDFGKEIYCFFDKNDEDQLDYTGCSD
LIYQGAN*ITEIKDVYYESQTRGE

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 30489; Mature: 30489

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGREMKSSLIYYAIKYKGDYKLIQNAIQTKEEITKEEFLKLQEKLDSGKIKAITILDEN
CCCHHHHHCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
YPEAFQVLKNPPYVLFYQGKIEFLENKNPKSALIGEKYNSKIQEFFNKSLDQIIKRHILV
CHHHHHHHCCCCEEEEECCEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHEEE
TNGYKGVEQKIMEYYRLYEAPIIAVSANGIKNPPFENFQDYKNILIISEYPTGCNVNKKR
ECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHCCEEEEECCCCCCCCCHHH
LIERNRLVAALANFLVVYSIRKSGGSQNLVNYFLDFGKEIYCFFDKNDEDQLDYTGCSDL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHH
IYQGANITEIKDVYYESQTRGE
HHCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKGREMKSSLIYYAIKYKGDYKLIQNAIQTKEEITKEEFLKLQEKLDSGKIKAITILDEN
CCCHHHHHCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
YPEAFQVLKNPPYVLFYQGKIEFLENKNPKSALIGEKYNSKIQEFFNKSLDQIIKRHILV
CHHHHHHHCCCCEEEEECCEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHEEE
TNGYKGVEQKIMEYYRLYEAPIIAVSANGIKNPPFENFQDYKNILIISEYPTGCNVNKKR
ECCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHCCEEEEECCCCCCCCCHHH
LIERNRLVAALANFLVVYSIRKSGGSQNLVNYFLDFGKEIYCFFDKNDEDQLDYTGCSDL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHH
IYQGANITEIKDVYYESQTRGE
HHCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]