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The map label for this gene is cycB

Identifier: 52842934

GI number: 52842934

Start: 3080093

End: 3080557

Strand: Reverse

Name: cycB

Synonym: lpg2730

Alternate gene names: NA

Gene position: 3080557-3080093 (Counterclockwise)

Preceding gene: 52842936

Following gene: 52842933

Centisome position: 90.66

GC content: 40.0

Gene sequence:

>465_bases
ATGATTTTTAAATTAACTATTAGAGGACGGATAAATATGAGGTTGAATATTGCGCTGATCTTGTCTTTTTTTTCAATCAT
GCTTTTTGCAATGGACGAGGTGGATGAGCAACAAATTTTACAAAGAATTCAACCGGTTGGGAAAGTTCGAGTTCAAGAGG
AGCAGGGGAATAACATAGAAGCTGGAGCGACTAAAACGACTGTTGTTGATTCCAAGAGCAAAAAAGAACCAGGCCAAGAT
ATATATGATAAATATTGCTCCGTATGTCATAGAGATGGATTGGCAGGGGCGCCCAAGTTTCAATCGGAGGCCGATTGGAA
ACCTCGTTTGGCAAGTAAGAAAATAGATGATTTACTCGCTTCTGCAATCAAGGGGTTGAATGCCATGCCAGCAAAAGGTA
CTTGTATGGACTGTTCTGATGCTGAATTAAAAGCCGCGATACAATATATGTTGCCGAAATCATGA

Upstream 100 bases:

>100_bases
TGGAAGGATCTTTTCAGTAAAAGTCTAAGTATTCAGCTAATGATTTTATAAATCATTGGGCCTATTGAAATCTTTCTGGA
AAAAAAAGTCACTTGTCGGT

Downstream 100 bases:

>100_bases
AAAAGCTTACTTACAGAAAAATACAATCTTTTCAGGTAATTATTACTTTATTGGTAATATTCGCTTCGTTTTACCTTGAA
TATGCTGTTGGACTACAACC

Product: cytochrome c5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIFKLTIRGRINMRLNIALILSFFSIMLFAMDEVDEQQILQRIQPVGKVRVQEEQGNNIEAGATKTTVVDSKSKKEPGQD
IYDKYCSVCHRDGLAGAPKFQSEADWKPRLASKKIDDLLASAIKGLNAMPAKGTCMDCSDAELKAAIQYMLPKS

Sequences:

>Translated_154_residues
MIFKLTIRGRINMRLNIALILSFFSIMLFAMDEVDEQQILQRIQPVGKVRVQEEQGNNIEAGATKTTVVDSKSKKEPGQD
IYDKYCSVCHRDGLAGAPKFQSEADWKPRLASKKIDDLLASAIKGLNAMPAKGTCMDCSDAELKAAIQYMLPKS
>Mature_154_residues
MIFKLTIRGRINMRLNIALILSFFSIMLFAMDEVDEQQILQRIQPVGKVRVQEEQGNNIEAGATKTTVVDSKSKKEPGQD
IYDKYCSVCHRDGLAGAPKFQSEADWKPRLASKKIDDLLASAIKGLNAMPAKGTCMDCSDAELKAAIQYMLPKS

Specific function: It is unreactive with cytochrome c reductase or oxidase [H]

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR002323 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17111; Mature: 17111

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFKLTIRGRINMRLNIALILSFFSIMLFAMDEVDEQQILQRIQPVGKVRVQEEQGNNIE
CEEEEEECEEECEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHEEEECCCCCCEE
AGATKTTVVDSKSKKEPGQDIYDKYCSVCHRDGLAGAPKFQSEADWKPRLASKKIDDLLA
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
SAIKGLNAMPAKGTCMDCSDAELKAAIQYMLPKS
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MIFKLTIRGRINMRLNIALILSFFSIMLFAMDEVDEQQILQRIQPVGKVRVQEEQGNNIE
CEEEEEECEEECEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHEEEECCCCCCEE
AGATKTTVVDSKSKKEPGQDIYDKYCSVCHRDGLAGAPKFQSEADWKPRLASKKIDDLLA
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
SAIKGLNAMPAKGTCMDCSDAELKAAIQYMLPKS
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2993632 [H]