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The map label for this gene is ybzH [H]

Identifier: 52842928

GI number: 52842928

Start: 3076021

End: 3076320

Strand: Reverse

Name: ybzH [H]

Synonym: lpg2723

Alternate gene names: 52842928

Gene position: 3076320-3076021 (Counterclockwise)

Preceding gene: 52842929

Following gene: 52842927

Centisome position: 90.54

GC content: 34.33

Gene sequence:

>300_bases
ATGAACGTAATAAATATATTAAAAGCGCTTTCTAATGAAAAGCGACTACAGATAATCAGATGGCTAAAAGAGCCAGATAA
ACATTTCAGTTCGTCGCACTGTGATGTGAGCAAAGATGGTGTTTGTGTTGGCTTAATAGAAAAAAAATCAGGCTTATCTC
AATCCACGGTATCTCAATATTTATCACAATTACAGCAAGCTGGTTTGATATTCACTGAGCGTAGAGGACAGTGGACCTAT
TGTAAGGCGAATGCAAGCCTAATTAATGAATTTATAAATGAATTGAAAGTTATGATTTAA

Upstream 100 bases:

>100_bases
TTTTAGTGTTGGTATCGGGCAGGTTATTTGAAATTTCAACACACATGACCATGGGTAATCACTAAATTGACATATCGCAA
TAAAACGATATAATTAAAAT

Downstream 100 bases:

>100_bases
AAAATTTTGCTTGAATAAATCGAATATTTGCGATATTCCAATGTATTGTTATGACATGCAGGAGATTTATCATGGTTAAC
TCCGATTTAATTTTAAGTCC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MNVINILKALSNEKRLQIIRWLKEPDKHFSSSHCDVSKDGVCVGLIEKKSGLSQSTVSQYLSQLQQAGLIFTERRGQWTY
CKANASLINEFINELKVMI

Sequences:

>Translated_99_residues
MNVINILKALSNEKRLQIIRWLKEPDKHFSSSHCDVSKDGVCVGLIEKKSGLSQSTVSQYLSQLQQAGLIFTERRGQWTY
CKANASLINEFINELKVMI
>Mature_99_residues
MNVINILKALSNEKRLQIIRWLKEPDKHFSSSHCDVSKDGVCVGLIEKKSGLSQSTVSQYLSQLQQAGLIFTERRGQWTY
CKANASLINEFINELKVMI

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11270; Mature: 11270

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVINILKALSNEKRLQIIRWLKEPDKHFSSSHCDVSKDGVCVGLIEKKSGLSQSTVSQY
CCHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH
LSQLQQAGLIFTERRGQWTYCKANASLINEFINELKVMI
HHHHHHCCCEEEECCCCEEEEECCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVINILKALSNEKRLQIIRWLKEPDKHFSSSHCDVSKDGVCVGLIEKKSGLSQSTVSQY
CCHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH
LSQLQQAGLIFTERRGQWTYCKANASLINEFINELKVMI
HHHHHHCCCEEEECCCCEEEEECCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]