| Definition | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome. |
|---|---|
| Accession | NC_002942 |
| Length | 3,397,754 |
Click here to switch to the map view.
The map label for this gene is pheT
Identifier: 52842916
GI number: 52842916
Start: 3060657
End: 3063038
Strand: Reverse
Name: pheT
Synonym: lpg2710
Alternate gene names: 52842916
Gene position: 3063038-3060657 (Counterclockwise)
Preceding gene: 52842917
Following gene: 52842915
Centisome position: 90.15
GC content: 41.86
Gene sequence:
>2382_bases ATGAAAGTAAGTAAGTTATGGTTACGAGAATGGGTAAACTTCTCATTAACTGAACAAGAACTGGCTGAGCAATTGACCAT GGCTGGCTTGGAAGTCGACGCAGTGAATCCTGTAGCTGGCCAATTCACTCATGTCATTGTTGCTGAAGTCCTAGATACCA AGCCTCATCCAGATGCTGATAAATTAACCTTATGTGAAGTGAATATCAATAAAGACAAGCCGTTGAAAATTGTTTGTGGT GCGGCTAATGTGAGGCCTGGTTTGAGAGTTGCCCTGGCCATGATTGGGGCACACTTGCCTGGCGGTTTGCAAATTAAGGA ATCCAAATTGCGTGGAGAATTGTCTCAGGGCATGTTGTGTTCTGCGACAGAACTGGGACTGGCAGAACATTCCGAGGGGA TAATGGAACTGAGTGATGAGGCACCAATTGGAATGGATTTACGCGAGTATCTTGCCCTTGATGACCATGTATTTGATATT GATTTGACTCCGAATCGCGCAGATTGCTTTAGTATTTTGGGTGTCGCGCGGGAAGTGGCTGTTCTCAATAAATTACCCTT AATAGAGCAACCCATAGTTACAGTGCCGCCAGCCATCGATGATGGTCTTCGAGTGAATTTAATTCATTCCGAGGCATGCC CCCGATATTGCGGTCGAATTATCCGTAATTTAAATCTTGAAGCGAAAACACCATTATGGATGGCTGAGCGCTTACGTAGA GGCGGCATTAGAACGTTGCACCCTGTAGTCGATGTGATGAATTATGTCATGCTCGAGCTTGGACAACCCATGCATGCTTT TGATTTAGCAAAAATTAATGGTGAAATTAATGTACGTTATGGCGTTTCGGGCGAGCAATTAGAATTATTGGATGGTCAAG AAGTTGTATTAAACGACAATGTGTTGGTAATCGCCGATAAAGAAAAGCCTTTGGCTATGGCCGGAATAATGGGAGGAGCT AATAGCGCAGTTCAAGAGCAGACACAGCATGTTTTCCTGGAAAGCGCCTATTTTAATCCGGTGACAATTGCCGGAGTTGC CAGAAAATATGGCTTATTCAGTGATTCGTCACAACGATTCGAGCGGGGAGTGGACCCTTGTTTGCAATCAAAAGCTCTTG AAAGAGCGACGGAATTGATTTTATCTATCTCAGGTGGCGAAGCTGGGCCAGTGATAGAGTCTTTTGACAAAAAGTTTTTG CCAGGTACGGTTTCCTTTTTATTTGATACAACAAAAGTGAAAAAGTTAACCGGGCTGTCTATCCCTCTAAACGAAATGAA AAATTTACTGGAAGGTCTAGGTGTTGTCATCATCAAAGAAACTAATCATTTTTTTGAGGTCACCATTCCCTCTCATCGAG TCGATTTGCAACAAGATGCTGATTTGGTTGAAGAAATTATTCGTTTATATGGCTATGACAAGTTACAAGCTCAGCCAATG CAAACATCAGTACAAGCTGGTTTAATCAGTGCCAAGGAAAAAATTGCGACACACGTTTCATCGTGGTTTAGTGCCAAAGG CTACCATGAAACCATCAGTTATAGTTTTGTCGATCCTGAGTTGCAGGAAGCGCTTTACCCACAAAAAGAGTTTATGGAAC TGCTTAATCCAATTTCCTCTGAATTATCGCAAATGCGTGCGGGAATGTGGCCAGGCTTAATTGCATCTATGATTTATAAT AGCCACAGACAACAAACCGCAGTGAAATTTTTTGAAATAGGCGTGGTTTTTGATCTGGACGGAGGGCAATTAAAGGAGCG TTCATGTATTGCTGGCTTGTTAATGGGGGAGCAAGGCAATTTGAATTGGAGTGAATCTGCCCGTTTATTTGATTTTTATG ATTTAAAAGGGGATTTACAATCCTTGTTTGCTTCATTGAAGCTGGATGATGTTGAATTTATTCAATCATCTCATCATGCG CTTCACCCCGGCCAGTCAGCTCAGATTGTGATTAACGGCAAGCATTCAGGCTGGATCGGTGTGCTGCATCCTCGCTTGTC GGATGCCTTTGATCTTGACCAGGATGTGGTTTTGTTTGAGTTGAATCTTGAATCATTAATCAATCCGACTATTCCTCTGT ATAAGCCTATTTCCAAATATCCACAAATAAGGCGCGATTTGTCTTTCCTGGTTGATAGGCAGATAAGTGCCATGCAGATT GAGCGAGTAATCAGAAATACAGTTAAAGAGGATTGGTTAAAATCGTTTGACGTCTTTGACGTGTATATGGGTAAAGGTAT TCCAGAAGATAAAAAAAGTATTGCTGTGGCTATGACACTACAAGACGATACTCGAACTTTAGTTGATGCCGAGATCAATT TAACAATTAGTGCTATAATCAAGAAACTGGAAAATGAATTTTCAATCCTTTTGAGGGAATGA
Upstream 100 bases:
>100_bases AATAGTTATCAGTAATTTTATCTCTATTATCATAAAGAGAGCAAAATTAACGGATGGAAACTTTGAGCCAAATGAACAGT TACAGAGATGAGGACTTTAA
Downstream 100 bases:
>100_bases TCGTGAACGCACTAAGCAAAGCAATAATGGCAGAAACGTTGTGTGACGAATTAAAATTAAATAAACCAGTTGCTAAAGAA ATGGTTGAAAATTTTTTTGA
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 793; Mature: 793
Protein sequence:
>793_residues MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLDTKPHPDADKLTLCEVNINKDKPLKIVCG AANVRPGLRVALAMIGAHLPGGLQIKESKLRGELSQGMLCSATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDI DLTPNRADCFSILGVAREVAVLNKLPLIEQPIVTVPPAIDDGLRVNLIHSEACPRYCGRIIRNLNLEAKTPLWMAERLRR GGIRTLHPVVDVMNYVMLELGQPMHAFDLAKINGEINVRYGVSGEQLELLDGQEVVLNDNVLVIADKEKPLAMAGIMGGA NSAVQEQTQHVFLESAYFNPVTIAGVARKYGLFSDSSQRFERGVDPCLQSKALERATELILSISGGEAGPVIESFDKKFL PGTVSFLFDTTKVKKLTGLSIPLNEMKNLLEGLGVVIIKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDKLQAQPM QTSVQAGLISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALYPQKEFMELLNPISSELSQMRAGMWPGLIASMIYN SHRQQTAVKFFEIGVVFDLDGGQLKERSCIAGLLMGEQGNLNWSESARLFDFYDLKGDLQSLFASLKLDDVEFIQSSHHA LHPGQSAQIVINGKHSGWIGVLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKPISKYPQIRRDLSFLVDRQISAMQI ERVIRNTVKEDWLKSFDVFDVYMGKGIPEDKKSIAVAMTLQDDTRTLVDAEINLTISAIIKKLENEFSILLRE
Sequences:
>Translated_793_residues MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLDTKPHPDADKLTLCEVNINKDKPLKIVCG AANVRPGLRVALAMIGAHLPGGLQIKESKLRGELSQGMLCSATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDI DLTPNRADCFSILGVAREVAVLNKLPLIEQPIVTVPPAIDDGLRVNLIHSEACPRYCGRIIRNLNLEAKTPLWMAERLRR GGIRTLHPVVDVMNYVMLELGQPMHAFDLAKINGEINVRYGVSGEQLELLDGQEVVLNDNVLVIADKEKPLAMAGIMGGA NSAVQEQTQHVFLESAYFNPVTIAGVARKYGLFSDSSQRFERGVDPCLQSKALERATELILSISGGEAGPVIESFDKKFL PGTVSFLFDTTKVKKLTGLSIPLNEMKNLLEGLGVVIIKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDKLQAQPM QTSVQAGLISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALYPQKEFMELLNPISSELSQMRAGMWPGLIASMIYN SHRQQTAVKFFEIGVVFDLDGGQLKERSCIAGLLMGEQGNLNWSESARLFDFYDLKGDLQSLFASLKLDDVEFIQSSHHA LHPGQSAQIVINGKHSGWIGVLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKPISKYPQIRRDLSFLVDRQISAMQI ERVIRNTVKEDWLKSFDVFDVYMGKGIPEDKKSIAVAMTLQDDTRTLVDAEINLTISAIIKKLENEFSILLRE >Mature_793_residues MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLDTKPHPDADKLTLCEVNINKDKPLKIVCG AANVRPGLRVALAMIGAHLPGGLQIKESKLRGELSQGMLCSATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDI DLTPNRADCFSILGVAREVAVLNKLPLIEQPIVTVPPAIDDGLRVNLIHSEACPRYCGRIIRNLNLEAKTPLWMAERLRR GGIRTLHPVVDVMNYVMLELGQPMHAFDLAKINGEINVRYGVSGEQLELLDGQEVVLNDNVLVIADKEKPLAMAGIMGGA NSAVQEQTQHVFLESAYFNPVTIAGVARKYGLFSDSSQRFERGVDPCLQSKALERATELILSISGGEAGPVIESFDKKFL PGTVSFLFDTTKVKKLTGLSIPLNEMKNLLEGLGVVIIKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDKLQAQPM QTSVQAGLISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALYPQKEFMELLNPISSELSQMRAGMWPGLIASMIYN SHRQQTAVKFFEIGVVFDLDGGQLKERSCIAGLLMGEQGNLNWSESARLFDFYDLKGDLQSLFASLKLDDVEFIQSSHHA LHPGQSAQIVINGKHSGWIGVLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKPISKYPQIRRDLSFLVDRQISAMQI ERVIRNTVKEDWLKSFDVFDVYMGKGIPEDKKSIAVAMTLQDDTRTLVDAEINLTISAIIKKLENEFSILLRE
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788006, Length=797, Percent_Identity=46.6750313676286, Blast_Score=721, Evalue=0.0,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 88238; Mature: 88238
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLDTKPHPDAD CCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCC KLTLCEVNINKDKPLKIVCGAANVRPGLRVALAMIGAHLPGGLQIKESKLRGELSQGMLC CEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCEE SATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDIDLTPNRADCFSILGVAREVA CHHHCCCHHCCCCHHEECCCCCCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHH VLNKLPLIEQPIVTVPPAIDDGLRVNLIHSEACPRYCGRIIRNLNLEAKTPLWMAERLRR HHHCCCCCCCCCEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH GGIRTLHPVVDVMNYVMLELGQPMHAFDLAKINGEINVRYGVSGEQLELLDGQEVVLNDN CCCCHHHHHHHHHHHHHHHCCCCCHHHHHEEECCEEEEEECCCCCEEEEECCCEEEEECC VLVIADKEKPLAMAGIMGGANSAVQEQTQHVFLESAYFNPVTIAGVARKYGLFSDSSQRF EEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCHHHH ERGVDPCLQSKALERATELILSISGGEAGPVIESFDKKFLPGTVSFLFDTTKVKKLTGLS HHCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHCHHCCCCHHHHHHCHHHHHHHCCCC IPLNEMKNLLEGLGVVIIKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDKLQAQPM CCHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHCCCCH QTSVQAGLISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALYPQKEFMELLNPISS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHHHCCHHHHHHHHHHHHH ELSQMRAGMWPGLIASMIYNSHRQQTAVKFFEIGVVFDLDGGQLKERSCIAGLLMGEQGN HHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHEECCCCC LNWSESARLFDFYDLKGDLQSLFASLKLDDVEFIQSSHHALHPGQSAQIVINGKHSGWIG CCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCEEE VLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKPISKYPQIRRDLSFLVDRQISAMQI EECCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH ERVIRNTVKEDWLKSFDVFDVYMGKGIPEDKKSIAVAMTLQDDTRTLVDAEINLTISAII HHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEEECEEHHHHH KKLENEFSILLRE HHHHHHHHHEECC >Mature Secondary Structure MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLDTKPHPDAD CCCHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCC KLTLCEVNINKDKPLKIVCGAANVRPGLRVALAMIGAHLPGGLQIKESKLRGELSQGMLC CEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCEE SATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDIDLTPNRADCFSILGVAREVA CHHHCCCHHCCCCHHEECCCCCCCCCHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHH VLNKLPLIEQPIVTVPPAIDDGLRVNLIHSEACPRYCGRIIRNLNLEAKTPLWMAERLRR HHHCCCCCCCCCEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH GGIRTLHPVVDVMNYVMLELGQPMHAFDLAKINGEINVRYGVSGEQLELLDGQEVVLNDN CCCCHHHHHHHHHHHHHHHCCCCCHHHHHEEECCEEEEEECCCCCEEEEECCCEEEEECC VLVIADKEKPLAMAGIMGGANSAVQEQTQHVFLESAYFNPVTIAGVARKYGLFSDSSQRF EEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCHHHH ERGVDPCLQSKALERATELILSISGGEAGPVIESFDKKFLPGTVSFLFDTTKVKKLTGLS HHCCCHHHHHHHHHHHHHHEEEECCCCCCCHHHHHCHHCCCCHHHHHHCHHHHHHHCCCC IPLNEMKNLLEGLGVVIIKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDKLQAQPM CCHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHCCCCH QTSVQAGLISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALYPQKEFMELLNPISS HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHHHCCHHHHHHHHHHHHH ELSQMRAGMWPGLIASMIYNSHRQQTAVKFFEIGVVFDLDGGQLKERSCIAGLLMGEQGN HHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCHHHHHHHHHEECCCCC LNWSESARLFDFYDLKGDLQSLFASLKLDDVEFIQSSHHALHPGQSAQIVINGKHSGWIG CCCCCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCEEE VLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKPISKYPQIRRDLSFLVDRQISAMQI EECCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH ERVIRNTVKEDWLKSFDVFDVYMGKGIPEDKKSIAVAMTLQDDTRTLVDAEINLTISAII HHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEEEECEEHHHHH KKLENEFSILLRE HHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA