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The map label for this gene is petA

Identifier: 52842911

GI number: 52842911

Start: 3058041

End: 3058667

Strand: Reverse

Name: petA

Synonym: lpg2705

Alternate gene names: 52842911

Gene position: 3058667-3058041 (Counterclockwise)

Preceding gene: 52842912

Following gene: 52842910

Centisome position: 90.02

GC content: 43.86

Gene sequence:

>627_bases
GTGAGCGAAATGACTGATCTCAATCAGGATGTAAGTAATCATAATCAAGACGAACAATTGGATGAAGAGCGGCGTCGTTT
TTTGTTGCATACTACCTGTGTCTTAGGCGGGGTAGGCGCTGCATGCGCCTTAACTCCTTTTATTACTTCCTGGTTACCAA
GCTCTAAAGCACAAGCAGCAGGTGCTCCAGTCAAAGTTGATGTCAGTAGAATGGAGCCTGGTGAACAGGCTATTATTGAA
TGGCGTGGCAAACCAGTATGGATAATTAAACGAAGCAAGGACATGCTTAACCAGTTACAAAAAGAAGATGAGTCTCAACT
GAGGGATCCCGATTCTTTGGTGGATCAACAGCCGGAGTATGCGCAAAACAAGTTTCGCTCCATTAATCCCGAGTTTTTGG
TTTTAATCGGGATTTGTACTCATTTGGGTTGCTCTCCAAAATACAAACCTAGTCTTGGTGAGTTAGGCCCCGATTGGCCA
GGTGGCTTTTTTTGCCCATGTCATGGGTCAATGTTTGATCTTTCAGGCAGAGTATTTAAGGGCGTTCCTGCCCCTATCAA
TTTGGAAGTACCACCTTATCACTTTTTAGATGAACACACCATTGTGATAGGTGAGGATGCAAAATAA

Upstream 100 bases:

>100_bases
TCCAACCGTTTGAAAAATTGTTATTCTTTGTTATAACTAACGGGAGTTATATTAGGCGAACTGGCTCCAGTTCATAGACC
ATAATCAGGATGATTAAGCA

Downstream 100 bases:

>100_bases
GGATTAAGGCATGAATGGGTTAGTCAATTGGTTAGATGAACGTTTCCCTCTTGTTAGCACTTGGAAAGCGCATTTCAGTA
ATTATTATGCACCTAAAAAT

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSEMTDLNQDVSNHNQDEQLDEERRRFLLHTTCVLGGVGAACALTPFITSWLPSSKAQAAGAPVKVDVSRMEPGEQAIIE
WRGKPVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPEYAQNKFRSINPEFLVLIGICTHLGCSPKYKPSLGELGPDWP
GGFFCPCHGSMFDLSGRVFKGVPAPINLEVPPYHFLDEHTIVIGEDAK

Sequences:

>Translated_208_residues
MSEMTDLNQDVSNHNQDEQLDEERRRFLLHTTCVLGGVGAACALTPFITSWLPSSKAQAAGAPVKVDVSRMEPGEQAIIE
WRGKPVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPEYAQNKFRSINPEFLVLIGICTHLGCSPKYKPSLGELGPDWP
GGFFCPCHGSMFDLSGRVFKGVPAPINLEVPPYHFLDEHTIVIGEDAK
>Mature_207_residues
SEMTDLNQDVSNHNQDEQLDEERRRFLLHTTCVLGGVGAACALTPFITSWLPSSKAQAAGAPVKVDVSRMEPGEQAIIEW
RGKPVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPEYAQNKFRSINPEFLVLIGICTHLGCSPKYKPSLGELGPDWPG
GFFCPCHGSMFDLSGRVFKGVPAPINLEVPPYHFLDEHTIVIGEDAK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=198, Percent_Identity=34.3434343434343, Blast_Score=118, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17540418, Length=208, Percent_Identity=34.1346153846154, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6320811, Length=193, Percent_Identity=36.7875647668394, Blast_Score=126, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24580896, Length=161, Percent_Identity=40.9937888198758, Blast_Score=115, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 23203; Mature: 23071

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEMTDLNQDVSNHNQDEQLDEERRRFLLHTTCVLGGVGAACALTPFITSWLPSSKAQAA
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHC
GAPVKVDVSRMEPGEQAIIEWRGKPVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPEY
CCCEEEEHHHCCCCCHHHEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHCCCCHH
AQNKFRSINPEFLVLIGICTHLGCSPKYKPSLGELGPDWPGGFFCPCHGSMFDLSGRVFK
HHHHHHCCCCHHHHHEEHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCEEC
GVPAPINLEVPPYHFLDEHTIVIGEDAK
CCCCCEEECCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure 
SEMTDLNQDVSNHNQDEQLDEERRRFLLHTTCVLGGVGAACALTPFITSWLPSSKAQAA
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHC
GAPVKVDVSRMEPGEQAIIEWRGKPVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPEY
CCCEEEEHHHCCCCCHHHEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHCCCCHH
AQNKFRSINPEFLVLIGICTHLGCSPKYKPSLGELGPDWPGGFFCPCHGSMFDLSGRVFK
HHHHHHCCCCHHHHHEEHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCEEC
GVPAPINLEVPPYHFLDEHTIVIGEDAK
CCCCCEEECCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA